RNA–Protein interactions for RNA: ENST00000340019.4

TMC1-202, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TMC1, Length 3,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-202ENST00000340019 S100A7L2Q5SY68 101 aa4.94□□□□□ -1.62
TMC1-202ENST00000340019 MRPL55Q7Z7F7 128 aaKnown RBP4.94□□□□□ -1.62
TMC1-202ENST00000340019 SMIM11BQ8TCY0 68 aa4.94□□□□□ -1.62
TMC1-202ENST00000340019 NAA38Q9BRA0 125 aaKnown RBP4.94□□□□□ -1.62
TMC1-202ENST00000340019 B5MCH6 92 aa4.93□□□□□ -1.62
TMC1-202ENST00000340019 H3BUT2 72 aa4.93□□□□□ -1.62
TMC1-202ENST00000340019 RPL28P46779 137 aaKnown RBP4.93□□□□□ -1.62
TMC1-202ENST00000340019 KRTAP10-1P60331 282 aa4.93□□□□□ -1.62
TMC1-202ENST00000340019 Q6ZSA8 131 aa4.93□□□□□ -1.62
TMC1-202ENST00000340019 A0A087WYN8 130 aa4.93□□□□□ -1.62
TMC1-202ENST00000340019 Q1RN00 199 aa4.93□□□□□ -1.62
TMC1-202ENST00000340019 LINC00167Q96N53 147 aa4.93□□□□□ -1.62
TMC1-202ENST00000340019 IGLV1-50A0A075B6I6 118 aa4.92□□□□□ -1.62
TMC1-202ENST00000340019 A0A1W2PPM0 123 aa4.92□□□□□ -1.62
TMC1-202ENST00000340019 TRIAP1O43715 76 aa4.92□□□□□ -1.62
TMC1-202ENST00000340019 LCE2AQ5TA79 106 aaPredicted RBP4.92□□□□□ -1.62
TMC1-202ENST00000340019 PLAC8Q9NZF1 115 aa4.92□□□□□ -1.62
TMC1-202ENST00000340019 FAM30AQ9NZY2 134 aa4.92□□□□□ -1.62
TMC1-202ENST00000340019 APOBP04114 4563 aaKnown RBP4.91□□□□□ -1.62
TMC1-202ENST00000340019 TRAV23DV6A0A075B6W5 121 aa4.91□□□□□ -1.62
TMC1-202ENST00000340019 ANAPC13Q9BS18 74 aa4.91□□□□□ -1.62
TMC1-202ENST00000340019 KCNQ1DNQ9H478 68 aa4.91□□□□□ -1.62
TMC1-202ENST00000340019 PHF5AQ7RTV0 110 aaKnown RBP4.91□□□□□ -1.62
TMC1-202ENST00000340019 DPH3Q96FX2 82 aa4.91□□□□□ -1.62
TMC1-202ENST00000340019 RPL37AP8A6NKH3 93 aa4.91□□□□□ -1.62
TMC1-202ENST00000340019 PSMB2P49721 201 aa4.91□□□□□ -1.62
TMC1-202ENST00000340019 LCE2CQ5TA81 110 aa4.91□□□□□ -1.62
TMC1-202ENST00000340019 SPCS1Q9Y6A9 102 aa4.9□□□□□ -1.62
TMC1-202ENST00000340019 C6orf99Q4VX62 202 aa4.9□□□□□ -1.63
TMC1-202ENST00000340019 KRTAP11-1Q8IUC1 163 aa4.9□□□□□ -1.63
TMC1-202ENST00000340019 ZNF73O43830 326 aaPredicted RBP4.89□□□□□ -1.63
TMC1-202ENST00000340019 FABP2P12104 132 aa4.89□□□□□ -1.63
TMC1-202ENST00000340019 SPRR1AP35321 89 aa4.89□□□□□ -1.63
TMC1-202ENST00000340019 PRYO14603 147 aa4.89□□□□□ -1.63
TMC1-202ENST00000340019 CIRBP-AS1Q8TBR5 109 aa4.89□□□□□ -1.63
TMC1-202ENST00000340019 KRTAP4-16G5E9R7 235 aaPredicted RBP4.88□□□□□ -1.63
TMC1-202ENST00000340019 COX6CP09669 75 aa4.88□□□□□ -1.63
TMC1-202ENST00000340019 SCGB1C2P0DMR2 95 aa4.88□□□□□ -1.63
TMC1-202ENST00000340019 SCXQ7RTU7 201 aa4.88□□□□□ -1.63
TMC1-202ENST00000340019 DIRC1Q969H9 104 aa4.88□□□□□ -1.63
TMC1-202ENST00000340019 TRBV7-6A0A0J9YX20 115 aa4.88□□□□□ -1.63
TMC1-202ENST00000340019 LYRM7Q5U5X0 104 aa4.88□□□□□ -1.63
TMC1-202ENST00000340019 TCL1BO95988 128 aa4.87□□□□□ -1.63
TMC1-202ENST00000340019 H0YGX0 51 aa4.87□□□□□ -1.63
TMC1-202ENST00000340019 ELOF1P60002 83 aaKnown RBP4.87□□□□□ -1.63
TMC1-202ENST00000340019 REG3GQ6UW15 175 aa4.87□□□□□ -1.63
TMC1-202ENST00000340019 CLEC2BQ92478 149 aa4.87□□□□□ -1.63
TMC1-202ENST00000340019 FAM218AQ96MZ4 157 aa4.87□□□□□ -1.63
TMC1-202ENST00000340019 TRBV20-1A0A075B6N2 111 aa4.86□□□□□ -1.63
TMC1-202ENST00000340019 F8W1H4 67 aa4.86□□□□□ -1.63
TMC1-202ENST00000340019 UBE2BP63146 152 aa4.86□□□□□ -1.63
TMC1-202ENST00000340019 EPPK1P58107 5090 aaKnown RBP4.86□□□□□ -1.63
TMC1-202ENST00000340019 VPS13BQ7Z7G8 4022 aa4.86□□□□□ -1.63
TMC1-202ENST00000340019 LST1O00453 97 aa4.86□□□□□ -1.63
TMC1-202ENST00000340019 CDIP1Q9H305 208 aa4.86□□□□□ -1.63
TMC1-202ENST00000340019 MT-ATP8P03928 68 aa4.85□□□□□ -1.63
TMC1-202ENST00000340019 HAMPP81172 84 aa4.85□□□□□ -1.63
TMC1-202ENST00000340019 COX7BP24311 80 aa4.85□□□□□ -1.63
TMC1-202ENST00000340019 LINC00575Q6W349 94 aa4.85□□□□□ -1.63
TMC1-202ENST00000340019 ATXN8Q156A1 80 aa4.84□□□□□ -1.63
TMC1-202ENST00000340019 Q6ZRX8 168 aa4.84□□□□□ -1.63
TMC1-202ENST00000340019 H3BMG7 143 aa4.84□□□□□ -1.63
TMC1-202ENST00000340019 XGP55808 180 aa4.84□□□□□ -1.63
TMC1-202ENST00000340019 ETDCA0A1B0GVM5 59 aa4.83□□□□□ -1.64
TMC1-202ENST00000340019 PSORS1C2Q9UIG4 136 aa4.83□□□□□ -1.64
TMC1-202ENST00000340019 A0A1B0GX51 115 aa4.83□□□□□ -1.64
TMC1-202ENST00000340019 CCDC179H3BU77 68 aa4.83□□□□□ -1.64
TMC1-202ENST00000340019 TRACP01848 142 aa4.83□□□□□ -1.64
TMC1-202ENST00000340019 Q9BRP9 147 aa4.83□□□□□ -1.64
TMC1-202ENST00000340019 FAT1Q14517 4588 aa4.83□□□□□ -1.64
TMC1-202ENST00000340019 BCE1O60756 84 aa4.83□□□□□ -1.64
TMC1-202ENST00000340019 H0Y9J4 135 aa4.82□□□□□ -1.64
TMC1-202ENST00000340019 ETDBQ3ZM63 59 aa4.82□□□□□ -1.64
TMC1-202ENST00000340019 KRTAP13-1Q8IUC0 172 aa4.82□□□□□ -1.64
TMC1-202ENST00000340019 INAFM2P0DMQ5 153 aa4.82□□□□□ -1.64
TMC1-202ENST00000340019 FAM19A1Q7Z5A9 133 aa4.82□□□□□ -1.64
TMC1-202ENST00000340019 HSPG2P98160 4391 aa4.82□□□□□ -1.64
TMC1-202ENST00000340019 hADV29S1A0JD25 119 aa4.81□□□□□ -1.64
TMC1-202ENST00000340019 PRLHP81277 87 aa4.81□□□□□ -1.64
TMC1-202ENST00000340019 SMCR5Q8TEV8 140 aa4.81□□□□□ -1.64
TMC1-202ENST00000340019 NDUFV3P56181 108 aaKnown RBP4.81□□□□□ -1.64
TMC1-202ENST00000340019 DHRS4-AS1Q9P1J3 65 aa4.81□□□□□ -1.64
TMC1-202ENST00000340019 PRO0461Q9UI25 63 aa4.81□□□□□ -1.64
TMC1-202ENST00000340019 SLC25A20O43772 301 aa4.8□□□□□ -1.64
TMC1-202ENST00000340019 C1orf137Q5JT78 98 aa4.8□□□□□ -1.64
TMC1-202ENST00000340019 RYR1P21817 5038 aa4.8□□□□□ -1.64
TMC1-202ENST00000340019 C9JAW5 83 aa4.79□□□□□ -1.64
TMC1-202ENST00000340019 ERC2-IT1O76042 136 aa4.79□□□□□ -1.64
TMC1-202ENST00000340019 SNCGO76070 127 aa4.79□□□□□ -1.64
TMC1-202ENST00000340019 DNAL4O96015 105 aa4.79□□□□□ -1.64
TMC1-202ENST00000340019 LORP23490 312 aaPredicted RBP4.78□□□□□ -1.64
TMC1-202ENST00000340019 UBE2AP49459 152 aa4.78□□□□□ -1.64
TMC1-202ENST00000340019 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.78□□□□□ -1.64
TMC1-202ENST00000340019 Q6ZQY7 126 aa4.78□□□□□ -1.64
TMC1-202ENST00000340019 LINC01600Q96MT4 127 aa4.78□□□□□ -1.64
TMC1-202ENST00000340019 IGLV7-43P04211 117 aa4.78□□□□□ -1.64
TMC1-202ENST00000340019 SRRM2Q9UQ35 2752 aaKnown RBP4.78□□□□□ -1.64
TMC1-202ENST00000340019 ZNF861PO60384 105 aa4.78□□□□□ -1.64
TMC1-202ENST00000340019 HIGD2AQ9BW72 106 aa4.78□□□□□ -1.64
TMC1-202ENST00000340019 CDK2AP2O75956 126 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms