RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 C6orf99Q4VX62 202 aa9.07□□□□□ -0.96
NIPAL3-202ENST00000339255 H3BUT2 72 aa9.06□□□□□ -0.96
NIPAL3-202ENST00000339255 DNAH5Q8TE73 4624 aa9.05□□□□□ -0.96
NIPAL3-202ENST00000339255 H0YGX0 51 aa9.04□□□□□ -0.96
NIPAL3-202ENST00000339255 ETDCA0A1B0GVM5 59 aa9.04□□□□□ -0.96
NIPAL3-202ENST00000339255 NAA38Q9BRA0 125 aaKnown RBP9.04□□□□□ -0.96
NIPAL3-202ENST00000339255 A0A1W2PPM0 123 aa9.03□□□□□ -0.96
NIPAL3-202ENST00000339255 KRTAP4-16G5E9R7 235 aaPredicted RBP9.03□□□□□ -0.96
NIPAL3-202ENST00000339255 SCGB1C2P0DMR2 95 aa9.03□□□□□ -0.96
NIPAL3-202ENST00000339255 FABP2P12104 132 aa9.03□□□□□ -0.96
NIPAL3-202ENST00000339255 ELOF1P60002 83 aaKnown RBP9.02□□□□□ -0.97
NIPAL3-202ENST00000339255 HAMPP81172 84 aa9.02□□□□□ -0.97
NIPAL3-202ENST00000339255 KRTAP11-1Q8IUC1 163 aa9.02□□□□□ -0.97
NIPAL3-202ENST00000339255 BCE1O60756 84 aa9.01□□□□□ -0.97
NIPAL3-202ENST00000339255 CDK2AP2O75956 126 aa9.01□□□□□ -0.97
NIPAL3-202ENST00000339255 COX7BP24311 80 aa9.01□□□□□ -0.97
NIPAL3-202ENST00000339255 XGP55808 180 aa9.01□□□□□ -0.97
NIPAL3-202ENST00000339255 Q6ZRX8 168 aa9.01□□□□□ -0.97
NIPAL3-202ENST00000339255 TRBV20-1A0A075B6N2 111 aa9□□□□□ -0.97
NIPAL3-202ENST00000339255 PSORS1C2Q9UIG4 136 aa9□□□□□ -0.97
NIPAL3-202ENST00000339255 H0Y9J4 135 aa9□□□□□ -0.97
NIPAL3-202ENST00000339255 SNCGO76070 127 aa9□□□□□ -0.97
NIPAL3-202ENST00000339255 B5MCH6 92 aa8.99□□□□□ -0.97
NIPAL3-202ENST00000339255 LINC00528Q8N1L1 170 aa8.99□□□□□ -0.97
NIPAL3-202ENST00000339255 FAM19A1Q7Z5A9 133 aa8.98□□□□□ -0.97
NIPAL3-202ENST00000339255 A0A1B0GX51 115 aa8.97□□□□□ -0.97
NIPAL3-202ENST00000339255 SLC25A20O43772 301 aa8.97□□□□□ -0.97
NIPAL3-202ENST00000339255 INAFM2P0DMQ5 153 aa8.97□□□□□ -0.97
NIPAL3-202ENST00000339255 DHRS4-AS1Q9P1J3 65 aa8.97□□□□□ -0.97
NIPAL3-202ENST00000339255 UBE2AP49459 152 aa8.97□□□□□ -0.97
NIPAL3-202ENST00000339255 C1orf137Q5JT78 98 aa8.97□□□□□ -0.97
NIPAL3-202ENST00000339255 ATXN8Q156A1 80 aa8.96□□□□□ -0.98
NIPAL3-202ENST00000339255 LINC00575Q6W349 94 aa8.96□□□□□ -0.98
NIPAL3-202ENST00000339255 CLEC2BQ92478 149 aa8.96□□□□□ -0.98
NIPAL3-202ENST00000339255 LST1O00453 97 aa8.95□□□□□ -0.98
NIPAL3-202ENST00000339255 SPCS1Q9Y6A9 102 aa8.95□□□□□ -0.98
NIPAL3-202ENST00000339255 TCL1BO95988 128 aa8.94□□□□□ -0.98
NIPAL3-202ENST00000339255 TRACP01848 142 aa8.94□□□□□ -0.98
NIPAL3-202ENST00000339255 PRLHP81277 87 aa8.94□□□□□ -0.98
NIPAL3-202ENST00000339255 LRP1BQ9NZR2 4599 aa8.94□□□□□ -0.98
NIPAL3-202ENST00000339255 hADV29S1A0JD25 119 aa8.94□□□□□ -0.98
NIPAL3-202ENST00000339255 KRTAP13-1Q8IUC0 172 aa8.94□□□□□ -0.98
NIPAL3-202ENST00000339255 FAM218AQ96MZ4 157 aa8.94□□□□□ -0.98
NIPAL3-202ENST00000339255 IGLV7-43P04211 117 aa8.93□□□□□ -0.98
NIPAL3-202ENST00000339255 GTF2H5Q6ZYL4 71 aa8.93□□□□□ -0.98
NIPAL3-202ENST00000339255 Q9BRP9 147 aa8.93□□□□□ -0.98
NIPAL3-202ENST00000339255 DNAH8Q96JB1 4490 aa8.92□□□□□ -0.98
NIPAL3-202ENST00000339255 K7EP34 96 aa8.92□□□□□ -0.98
NIPAL3-202ENST00000339255 DNAL4O96015 105 aa8.92□□□□□ -0.98
NIPAL3-202ENST00000339255 RPL37AP61513 92 aaKnown RBP8.92□□□□□ -0.98
NIPAL3-202ENST00000339255 ZNF861PO60384 105 aa8.91□□□□□ -0.98
NIPAL3-202ENST00000339255 HIGD2AQ9BW72 106 aa8.91□□□□□ -0.98
NIPAL3-202ENST00000339255 SMR3BP02814 79 aaPredicted RBP8.9□□□□□ -0.98
NIPAL3-202ENST00000339255 SMCR5Q8TEV8 140 aa8.9□□□□□ -0.98
NIPAL3-202ENST00000339255 DYNC1H1Q14204 4646 aaKnown RBP8.9□□□□□ -0.99
NIPAL3-202ENST00000339255 A0A1B0GV90 55 aa8.89□□□□□ -0.99
NIPAL3-202ENST00000339255 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.89□□□□□ -0.99
NIPAL3-202ENST00000339255 H3BMG7 143 aa8.88□□□□□ -0.99
NIPAL3-202ENST00000339255 GHRHP01286 108 aa8.88□□□□□ -0.99
NIPAL3-202ENST00000339255 OCIAD2Q56VL3 154 aa8.88□□□□□ -0.99
NIPAL3-202ENST00000339255 FAM229AH3BQW9 127 aa8.87□□□□□ -0.99
NIPAL3-202ENST00000339255 PLA2G1BP04054 148 aaKnown RBP8.87□□□□□ -0.99
NIPAL3-202ENST00000339255 Q6ZQY7 126 aa8.87□□□□□ -0.99
NIPAL3-202ENST00000339255 H3BQ85 93 aa8.86□□□□□ -0.99
NIPAL3-202ENST00000339255 ORMDL1Q9P0S3 153 aa8.85□□□□□ -0.99
NIPAL3-202ENST00000339255 ZNF706Q9Y5V0 76 aaPredicted RBP8.85□□□□□ -0.99
NIPAL3-202ENST00000339255 ERC2-IT1O76042 136 aa8.85□□□□□ -0.99
NIPAL3-202ENST00000339255 PPDPFLQ8WWR9 84 aa8.85□□□□□ -0.99
NIPAL3-202ENST00000339255 C9JAW5 83 aa8.84□□□□□ -0.99
NIPAL3-202ENST00000339255 SRRM2Q9UQ35 2752 aaKnown RBP8.83□□□□□ -1
NIPAL3-202ENST00000339255 APOBP04114 4563 aaKnown RBP8.83□□□□□ -1
NIPAL3-202ENST00000339255 IGLV5-48A0A075B6I7 105 aa8.82□□□□□ -1
NIPAL3-202ENST00000339255 UBE2V1Q13404 147 aa8.82□□□□□ -1
NIPAL3-202ENST00000339255 KRTAP10-4P60372 401 aaPredicted RBP8.81□□□□□ -1
NIPAL3-202ENST00000339255 H3BT86 120 aa8.81□□□□□ -1
NIPAL3-202ENST00000339255 TMEM256-PLSCR3K7ERE1 68 aa8.81□□□□□ -1
NIPAL3-202ENST00000339255 SPINK6Q6UWN8 80 aa8.81□□□□□ -1
NIPAL3-202ENST00000339255 TEX49A0A1B0GTD5 131 aa8.8□□□□□ -1
NIPAL3-202ENST00000339255 Q5VSD8 79 aa8.8□□□□□ -1
NIPAL3-202ENST00000339255 EPPK1P58107 5090 aaKnown RBP8.79□□□□□ -1
NIPAL3-202ENST00000339255 BAALC-AS2P0C853 105 aa8.79□□□□□ -1
NIPAL3-202ENST00000339255 ST20-AS1Q8NBB2 130 aa8.79□□□□□ -1
NIPAL3-202ENST00000339255 F8W1H4 67 aa8.78□□□□□ -1
NIPAL3-202ENST00000339255 Q8N1X5 172 aa8.78□□□□□ -1
NIPAL3-202ENST00000339255 SPRR4Q96PI1 79 aa8.78□□□□□ -1
NIPAL3-202ENST00000339255 VPS13BQ7Z7G8 4022 aa8.78□□□□□ -1
NIPAL3-202ENST00000339255 SPRR1BP22528 89 aa8.78□□□□□ -1
NIPAL3-202ENST00000339255 LINC01547P58512 204 aaPredicted RBP8.78□□□□□ -1
NIPAL3-202ENST00000339255 ANKRD29Q8N6D5 301 aa8.78□□□□□ -1
NIPAL3-202ENST00000339255 DEFB105AQ8NG35 78 aa8.78□□□□□ -1
NIPAL3-202ENST00000339255 LINC00483Q53H64 154 aa8.77□□□□□ -1.01
NIPAL3-202ENST00000339255 LINC01600Q96MT4 127 aa8.77□□□□□ -1.01
NIPAL3-202ENST00000339255 PRO0461Q9UI25 63 aa8.77□□□□□ -1.01
NIPAL3-202ENST00000339255 GAGE2AQ6NT46 116 aa8.76□□□□□ -1.01
NIPAL3-202ENST00000339255 Q8N377 158 aa8.76□□□□□ -1.01
NIPAL3-202ENST00000339255 MTURNQ8N3F0 131 aa8.76□□□□□ -1.01
NIPAL3-202ENST00000339255 HSPG2P98160 4391 aa8.74□□□□□ -1.01
NIPAL3-202ENST00000339255 SMCPP49901 116 aaPredicted RBP8.72□□□□□ -1.01
NIPAL3-202ENST00000339255 LAMTOR3Q9UHA4 124 aa8.72□□□□□ -1.01
NIPAL3-202ENST00000339255 NDUFV3P56181 108 aaKnown RBP8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 125.7 ms