RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 HRCT1Q6UXD1 115 aa4.17□□□□□ -1.74
PRKDC-202ENST00000338368 CHD6Q8TD26 2715 aa4.17□□□□□ -1.74
PRKDC-202ENST00000338368 NBDYA0A0U1RRE5 68 aa4.16□□□□□ -1.74
PRKDC-202ENST00000338368 Q6ZRX8 168 aa4.16□□□□□ -1.74
PRKDC-202ENST00000338368 Q6ZQT0 140 aa4.16□□□□□ -1.74
PRKDC-202ENST00000338368 C16orf90A8MZG2 172 aa4.16□□□□□ -1.74
PRKDC-202ENST00000338368 RPL37AP61513 92 aaKnown RBP4.16□□□□□ -1.74
PRKDC-202ENST00000338368 SERTAD4-AS1Q5TG53 156 aa4.16□□□□□ -1.74
PRKDC-202ENST00000338368 SPINK6Q6UWN8 80 aa4.16□□□□□ -1.74
PRKDC-202ENST00000338368 IGLV1-50A0A075B6I6 118 aa4.15□□□□□ -1.75
PRKDC-202ENST00000338368 PHF5AQ7RTV0 110 aaKnown RBP4.15□□□□□ -1.75
PRKDC-202ENST00000338368 LOC110117498A0A087WWA1 95 aa4.15□□□□□ -1.75
PRKDC-202ENST00000338368 Q8N9L7 120 aa4.15□□□□□ -1.75
PRKDC-202ENST00000338368 DEFB116Q30KQ4 102 aa4.15□□□□□ -1.75
PRKDC-202ENST00000338368 LINC00528Q8N1L1 170 aa4.15□□□□□ -1.75
PRKDC-202ENST00000338368 ST20-AS1Q8NBB2 130 aa4.15□□□□□ -1.75
PRKDC-202ENST00000338368 SPTBN5Q9NRC6 3674 aaKnown RBP4.14□□□□□ -1.75
PRKDC-202ENST00000338368 MAP1AP78559 2803 aaPredicted RBP4.14□□□□□ -1.75
PRKDC-202ENST00000338368 KCNQ1DNQ9H478 68 aa4.14□□□□□ -1.75
PRKDC-202ENST00000338368 H3BPC8 53 aa4.14□□□□□ -1.75
PRKDC-202ENST00000338368 FAM30AQ9NZY2 134 aa4.14□□□□□ -1.75
PRKDC-202ENST00000338368 FAM168BA1KXE4 195 aa4.13□□□□□ -1.75
PRKDC-202ENST00000338368 C9orf129Q5T035 196 aaKnown RBP4.13□□□□□ -1.75
PRKDC-202ENST00000338368 CASC10Q5T4H9 136 aa4.12□□□□□ -1.75
PRKDC-202ENST00000338368 TLX1NBP0CAT3 122 aa4.12□□□□□ -1.75
PRKDC-202ENST00000338368 LINC01600Q96MT4 127 aa4.12□□□□□ -1.75
PRKDC-202ENST00000338368 LINC00476Q8WZB0 136 aa4.12□□□□□ -1.75
PRKDC-202ENST00000338368 hDV103S1A0JD37 113 aa4.12□□□□□ -1.75
PRKDC-202ENST00000338368 CHTF8P0CG12 524 aa4.12□□□□□ -1.75
PRKDC-202ENST00000338368 A6NED7 52 aa4.11□□□□□ -1.75
PRKDC-202ENST00000338368 LINC00208Q96KT6 92 aa4.11□□□□□ -1.75
PRKDC-202ENST00000338368 COL6A3P12111 3177 aa4.11□□□□□ -1.75
PRKDC-202ENST00000338368 Q8NBF4 154 aa4.11□□□□□ -1.75
PRKDC-202ENST00000338368 TRIOO75962 3097 aa4.11□□□□□ -1.75
PRKDC-202ENST00000338368 J3QL48 77 aa4.11□□□□□ -1.75
PRKDC-202ENST00000338368 COL6A5A8TX70 2615 aa4.11□□□□□ -1.75
PRKDC-202ENST00000338368 KLKP1Q107X0 134 aa4.1□□□□□ -1.75
PRKDC-202ENST00000338368 TMEM254Q8TBM7 123 aa4.1□□□□□ -1.75
PRKDC-202ENST00000338368 C9orf163Q8N9P6 203 aa4.1□□□□□ -1.75
PRKDC-202ENST00000338368 APLNQ9ULZ1 77 aa4.1□□□□□ -1.75
PRKDC-202ENST00000338368 EPM2AB3EWF7 344 aa4.1□□□□□ -1.75
PRKDC-202ENST00000338368 RTL8CO15255 209 aa4.1□□□□□ -1.75
PRKDC-202ENST00000338368 PMAIP1Q13794 54 aa4.1□□□□□ -1.75
PRKDC-202ENST00000338368 Q8N377 158 aa4.1□□□□□ -1.75
PRKDC-202ENST00000338368 RETNLBQ9BQ08 111 aa4.1□□□□□ -1.75
PRKDC-202ENST00000338368 CIRBP-AS1Q8TBR5 109 aa4.1□□□□□ -1.75
PRKDC-202ENST00000338368 PLA2G2DQ9UNK4 145 aa4.09□□□□□ -1.75
PRKDC-202ENST00000338368 TRBV7-4A0A0J9YYF1 115 aa4.09□□□□□ -1.75
PRKDC-202ENST00000338368 FRYLO94915 3013 aa4.09□□□□□ -1.75
PRKDC-202ENST00000338368 PRR4Q16378 134 aa4.09□□□□□ -1.75
PRKDC-202ENST00000338368 NSD1Q96L73 2696 aaPredicted RBP4.09□□□□□ -1.75
PRKDC-202ENST00000338368 MGAQ8IWI9 3026 aa4.08□□□□□ -1.76
PRKDC-202ENST00000338368 MPLKIPQ8TAP9 179 aa4.08□□□□□ -1.76
PRKDC-202ENST00000338368 Q8NDZ9 215 aa4.08□□□□□ -1.76
PRKDC-202ENST00000338368 IGHV6-1A0A0B4J1U7 121 aa4.07□□□□□ -1.76
PRKDC-202ENST00000338368 STAB2Q8WWQ8 2551 aa4.07□□□□□ -1.76
PRKDC-202ENST00000338368 SMIM29Q86T20 159 aa4.07□□□□□ -1.76
PRKDC-202ENST00000338368 HCG22E2RYF7 251 aa4.07□□□□□ -1.76
PRKDC-202ENST00000338368 FREM2Q5SZK8 3169 aa4.07□□□□□ -1.76
PRKDC-202ENST00000338368 A0A1W2PNN7 141 aa4.07□□□□□ -1.76
PRKDC-202ENST00000338368 A0A087WTM6 91 aa4.05□□□□□ -1.76
PRKDC-202ENST00000338368 ATP11AUNQ6ZP68 121 aa4.05□□□□□ -1.76
PRKDC-202ENST00000338368 PRR15Q8IV56 129 aa4.05□□□□□ -1.76
PRKDC-202ENST00000338368 CYP4F30PQ9H0H9 118 aa4.05□□□□□ -1.76
PRKDC-202ENST00000338368 IGLV5-37A0A075B6J1 123 aa4.05□□□□□ -1.76
PRKDC-202ENST00000338368 C8orf87E5RJ46 101 aa4.05□□□□□ -1.76
PRKDC-202ENST00000338368 CNBPP62633 177 aaKnown RBP4.05□□□□□ -1.76
PRKDC-202ENST00000338368 VPS13AQ96RL7 3174 aa4.04□□□□□ -1.76
PRKDC-202ENST00000338368 MOBPQ13875 183 aa4.04□□□□□ -1.76
PRKDC-202ENST00000338368 LAMA1P25391 3075 aa4.04□□□□□ -1.76
PRKDC-202ENST00000338368 TYMSOSQ8TAI1 123 aa4.04□□□□□ -1.76
PRKDC-202ENST00000338368 IGLV5-48A0A075B6I7 105 aa4.04□□□□□ -1.76
PRKDC-202ENST00000338368 A0A1W2PNM2 257 aa4.04□□□□□ -1.76
PRKDC-202ENST00000338368 UTP20O75691 2785 aaKnown RBP4.03□□□□□ -1.76
PRKDC-202ENST00000338368 IGFL1Q6UW32 110 aa4.03□□□□□ -1.76
PRKDC-202ENST00000338368 OBSCN-AS1Q96MR7 158 aa4.03□□□□□ -1.76
PRKDC-202ENST00000338368 H0Y9P7 68 aa4.03□□□□□ -1.76
PRKDC-202ENST00000338368 KRTAP26-1Q6PEX3 210 aa4.03□□□□□ -1.76
PRKDC-202ENST00000338368 SSBP3-AS1Q7Z2R9 100 aa4.03□□□□□ -1.77
PRKDC-202ENST00000338368 MUC3AQ02505 3323 aa4.02□□□□□ -1.77
PRKDC-202ENST00000338368 A0A0G2JQZ4 141 aa4.02□□□□□ -1.77
PRKDC-202ENST00000338368 K7EQZ3 153 aa4.02□□□□□ -1.77
PRKDC-202ENST00000338368 DSPP15924 2871 aaKnown RBP4.02□□□□□ -1.77
PRKDC-202ENST00000338368 RBM12B-AS1Q9P1G2 102 aa4.01□□□□□ -1.77
PRKDC-202ENST00000338368 REV3LO60673 3130 aa4.01□□□□□ -1.77
PRKDC-202ENST00000338368 KRTAP21-3Q3LHN1 58 aa4.01□□□□□ -1.77
PRKDC-202ENST00000338368 SPINK1P00995 79 aa4.01□□□□□ -1.77
PRKDC-202ENST00000338368 CFAP54Q96N23 3096 aa4□□□□□ -1.77
PRKDC-202ENST00000338368 CD164Q04900 197 aa4□□□□□ -1.77
PRKDC-202ENST00000338368 ACYP2P14621 99 aa4□□□□□ -1.77
PRKDC-202ENST00000338368 ZNF861PO60384 105 aa4□□□□□ -1.77
PRKDC-202ENST00000338368 LINC00313P59037 77 aa4□□□□□ -1.77
PRKDC-202ENST00000338368 PCOTHQ58A44 107 aa4□□□□□ -1.77
PRKDC-202ENST00000338368 C1orf64Q8NEQ6 169 aa3.99□□□□□ -1.77
PRKDC-202ENST00000338368 SPANXA2-OT1Q8N9U9 137 aa3.99□□□□□ -1.77
PRKDC-202ENST00000338368 SPACA4Q8TDM5 124 aa3.99□□□□□ -1.77
PRKDC-202ENST00000338368 KRTAP1-5Q9BYS1 174 aa3.98□□□□□ -1.77
PRKDC-202ENST00000338368 PSORS1C2Q9UIG4 136 aa3.98□□□□□ -1.77
PRKDC-202ENST00000338368 IGSF10Q6WRI0 2623 aa3.98□□□□□ -1.77
PRKDC-202ENST00000338368 SPRR1AP35321 89 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms