RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 KRTAP17-1Q9BYP8 105 aa13.31□□□□□ -0.28
TPM1-204ENST00000334895 FAT1Q14517 4588 aa13.31□□□□□ -0.28
TPM1-204ENST00000334895 SPRR1AP35321 89 aa13.31□□□□□ -0.28
TPM1-204ENST00000334895 TAX1BP3O14907 124 aa13.3□□□□□ -0.28
TPM1-204ENST00000334895 ZNF73O43830 326 aaPredicted RBP13.3□□□□□ -0.28
TPM1-204ENST00000334895 RPL28P46779 137 aaKnown RBP13.3□□□□□ -0.28
TPM1-204ENST00000334895 Q1RN00 199 aa13.3□□□□□ -0.28
TPM1-204ENST00000334895 REG3GQ6UW15 175 aa13.3□□□□□ -0.28
TPM1-204ENST00000334895 PSORS1C2Q9UIG4 136 aa13.3□□□□□ -0.28
TPM1-204ENST00000334895 KRTAP4-16G5E9R7 235 aaPredicted RBP13.29□□□□□ -0.28
TPM1-204ENST00000334895 SMR3BP02814 79 aaPredicted RBP13.28□□□□□ -0.28
TPM1-204ENST00000334895 C6orf99Q4VX62 202 aa13.28□□□□□ -0.28
TPM1-204ENST00000334895 COL5A1-AS1Q5SY13 56 aa13.28□□□□□ -0.28
TPM1-204ENST00000334895 NAA38Q9BRA0 125 aaKnown RBP13.27□□□□□ -0.29
TPM1-204ENST00000334895 DIRC1Q969H9 104 aa13.26□□□□□ -0.29
TPM1-204ENST00000334895 TRIAP1O43715 76 aa13.25□□□□□ -0.29
TPM1-204ENST00000334895 LINC00528Q8N1L1 170 aa13.24□□□□□ -0.29
TPM1-204ENST00000334895 BCE1O60756 84 aa13.23□□□□□ -0.29
TPM1-204ENST00000334895 VPS13BQ7Z7G8 4022 aa13.22□□□□□ -0.29
TPM1-204ENST00000334895 C1orf137Q5JT78 98 aa13.22□□□□□ -0.29
TPM1-204ENST00000334895 C9orf118A6NHY6 69 aa13.21□□□□□ -0.29
TPM1-204ENST00000334895 B5MCH6 92 aa13.21□□□□□ -0.29
TPM1-204ENST00000334895 ETDCA0A1B0GVM5 59 aa13.21□□□□□ -0.3
TPM1-204ENST00000334895 PSMB2P49721 201 aa13.21□□□□□ -0.3
TPM1-204ENST00000334895 H3BUT2 72 aa13.2□□□□□ -0.3
TPM1-204ENST00000334895 ELOF1P60002 83 aaKnown RBP13.2□□□□□ -0.3
TPM1-204ENST00000334895 PRLHP81277 87 aa13.2□□□□□ -0.3
TPM1-204ENST00000334895 FAM19A1Q7Z5A9 133 aa13.2□□□□□ -0.3
TPM1-204ENST00000334895 TRBV7-6A0A0J9YX20 115 aa13.19□□□□□ -0.3
TPM1-204ENST00000334895 KRTAP13-1Q8IUC0 172 aa13.19□□□□□ -0.3
TPM1-204ENST00000334895 COX7BP24311 80 aa13.18□□□□□ -0.3
TPM1-204ENST00000334895 Q6ZRX8 168 aa13.18□□□□□ -0.3
TPM1-204ENST00000334895 Q8N1X5 172 aa13.18□□□□□ -0.3
TPM1-204ENST00000334895 KRTAP4-5Q9BYR2 181 aa13.17□□□□□ -0.3
TPM1-204ENST00000334895 RPL37AP61513 92 aaKnown RBP13.16□□□□□ -0.3
TPM1-204ENST00000334895 IGLV7-43P04211 117 aa13.15□□□□□ -0.3
TPM1-204ENST00000334895 KRTAP10-4P60372 401 aaPredicted RBP13.15□□□□□ -0.3
TPM1-204ENST00000334895 VAMP3Q15836 100 aa13.15□□□□□ -0.3
TPM1-204ENST00000334895 Q9BRP9 147 aa13.15□□□□□ -0.3
TPM1-204ENST00000334895 FAM218AQ96MZ4 157 aa13.14□□□□□ -0.31
TPM1-204ENST00000334895 H0Y9J4 135 aa13.13□□□□□ -0.31
TPM1-204ENST00000334895 UBE2AP49459 152 aa13.13□□□□□ -0.31
TPM1-204ENST00000334895 CLEC2BQ92478 149 aa13.13□□□□□ -0.31
TPM1-204ENST00000334895 COX6CP09669 75 aa13.13□□□□□ -0.31
TPM1-204ENST00000334895 A0A1W2PPM0 123 aa13.12□□□□□ -0.31
TPM1-204ENST00000334895 H0YGX0 51 aa13.12□□□□□ -0.31
TPM1-204ENST00000334895 SCGB1C2P0DMR2 95 aa13.12□□□□□ -0.31
TPM1-204ENST00000334895 Q5VSD8 79 aa13.12□□□□□ -0.31
TPM1-204ENST00000334895 LINC00575Q6W349 94 aa13.12□□□□□ -0.31
TPM1-204ENST00000334895 SMCR5Q8TEV8 140 aa13.12□□□□□ -0.31
TPM1-204ENST00000334895 FAM229AH3BQW9 127 aa13.11□□□□□ -0.31
TPM1-204ENST00000334895 ZNF861PO60384 105 aa13.1□□□□□ -0.31
TPM1-204ENST00000334895 SRRM2Q9UQ35 2752 aaKnown RBP13.1□□□□□ -0.31
TPM1-204ENST00000334895 ABCA13Q86UQ4 5058 aa13.09□□□□□ -0.31
TPM1-204ENST00000334895 ERC2-IT1O76042 136 aa13.09□□□□□ -0.31
TPM1-204ENST00000334895 HIGD2AQ9BW72 106 aa13.09□□□□□ -0.31
TPM1-204ENST00000334895 PCLOQ9Y6V0 5065 aa13.08□□□□□ -0.32
TPM1-204ENST00000334895 PLA2G1BP04054 148 aaKnown RBP13.08□□□□□ -0.32
TPM1-204ENST00000334895 TCL1BO95988 128 aa13.06□□□□□ -0.32
TPM1-204ENST00000334895 INAFM2P0DMQ5 153 aa13.06□□□□□ -0.32
TPM1-204ENST00000334895 DHRS4-AS1Q9P1J3 65 aa13.06□□□□□ -0.32
TPM1-204ENST00000334895 FABP2P12104 132 aa13.06□□□□□ -0.32
TPM1-204ENST00000334895 hADV29S1A0JD25 119 aa13.04□□□□□ -0.32
TPM1-204ENST00000334895 LST1O00453 97 aa13.04□□□□□ -0.32
TPM1-204ENST00000334895 LYRM7Q5U5X0 104 aa13.04□□□□□ -0.32
TPM1-204ENST00000334895 SLC25A20O43772 301 aa13.02□□□□□ -0.33
TPM1-204ENST00000334895 A0A1B0GX51 115 aa13.01□□□□□ -0.33
TPM1-204ENST00000334895 SNCGO76070 127 aa13.01□□□□□ -0.33
TPM1-204ENST00000334895 ST20-AS1Q8NBB2 130 aa13□□□□□ -0.33
TPM1-204ENST00000334895 SPCS1Q9Y6A9 102 aa13□□□□□ -0.33
TPM1-204ENST00000334895 TRBV20-1A0A075B6N2 111 aa12.99□□□□□ -0.33
TPM1-204ENST00000334895 ATXN8Q156A1 80 aa12.99□□□□□ -0.33
TPM1-204ENST00000334895 TRACP01848 142 aa12.98□□□□□ -0.33
TPM1-204ENST00000334895 Q6ZQY7 126 aa12.98□□□□□ -0.33
TPM1-204ENST00000334895 PKHD1L1Q86WI1 4243 aa12.97□□□□□ -0.33
TPM1-204ENST00000334895 SPINK6Q6UWN8 80 aa12.95□□□□□ -0.34
TPM1-204ENST00000334895 K7EP34 96 aa12.95□□□□□ -0.34
TPM1-204ENST00000334895 LINC01547P58512 204 aaPredicted RBP12.95□□□□□ -0.34
TPM1-204ENST00000334895 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.95□□□□□ -0.34
TPM1-204ENST00000334895 A0A1B0GV90 55 aa12.94□□□□□ -0.34
TPM1-204ENST00000334895 H3BMG7 143 aa12.93□□□□□ -0.34
TPM1-204ENST00000334895 SPRR4Q96PI1 79 aa12.93□□□□□ -0.34
TPM1-204ENST00000334895 IGLV5-48A0A075B6I7 105 aa12.91□□□□□ -0.34
TPM1-204ENST00000334895 DNAL4O96015 105 aa12.91□□□□□ -0.34
TPM1-204ENST00000334895 DEFB105AQ8NG35 78 aa12.9□□□□□ -0.34
TPM1-204ENST00000334895 ZNF706Q9Y5V0 76 aaPredicted RBP12.9□□□□□ -0.34
TPM1-204ENST00000334895 GAGE2AQ6NT46 116 aa12.89□□□□□ -0.35
TPM1-204ENST00000334895 Q8N377 158 aa12.88□□□□□ -0.35
TPM1-204ENST00000334895 FLG2Q5D862 2391 aaPredicted RBP12.88□□□□□ -0.35
TPM1-204ENST00000334895 KRTAP1-4P0C5Y4 121 aa12.87□□□□□ -0.35
TPM1-204ENST00000334895 SPRR1BP22528 89 aa12.87□□□□□ -0.35
TPM1-204ENST00000334895 ANAPC11Q9NYG5 84 aa12.87□□□□□ -0.35
TPM1-204ENST00000334895 ORMDL1Q9P0S3 153 aa12.87□□□□□ -0.35
TPM1-204ENST00000334895 C9JAW5 83 aa12.86□□□□□ -0.35
TPM1-204ENST00000334895 LINC00483Q53H64 154 aa12.86□□□□□ -0.35
TPM1-204ENST00000334895 GTF2H5Q6ZYL4 71 aa12.86□□□□□ -0.35
TPM1-204ENST00000334895 MTURNQ8N3F0 131 aa12.86□□□□□ -0.35
TPM1-204ENST00000334895 GHRHP01286 108 aa12.85□□□□□ -0.35
TPM1-204ENST00000334895 OCIAD2Q56VL3 154 aa12.85□□□□□ -0.35
TPM1-204ENST00000334895 TEX49A0A1B0GTD5 131 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms