RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 UBR5O95071 2799 aaPredicted RBP9.93□□□□□ -0.82
C9orf47-201ENST00000334490 IGLV6-57P01721 117 aa9.93□□□□□ -0.82
C9orf47-201ENST00000334490 RPL37AP61513 92 aaKnown RBP9.93□□□□□ -0.82
C9orf47-201ENST00000334490 H0Y9P7 68 aa9.92□□□□□ -0.82
C9orf47-201ENST00000334490 PRR15LQ9BU68 103 aa9.92□□□□□ -0.82
C9orf47-201ENST00000334490 C9orf163Q8N9P6 203 aa9.91□□□□□ -0.82
C9orf47-201ENST00000334490 SPTSSBQ8NFR3 76 aa9.9□□□□□ -0.82
C9orf47-201ENST00000334490 K7ERS5 55 aa9.9□□□□□ -0.82
C9orf47-201ENST00000334490 IGLV1-50A0A075B6I6 118 aa9.9□□□□□ -0.82
C9orf47-201ENST00000334490 SMCPP49901 116 aaPredicted RBP9.9□□□□□ -0.82
C9orf47-201ENST00000334490 CXCL6P80162 114 aa9.9□□□□□ -0.82
C9orf47-201ENST00000334490 BRK1Q8WUW1 75 aa9.9□□□□□ -0.83
C9orf47-201ENST00000334490 IGKV2D-30A0A075B6S6 120 aa9.88□□□□□ -0.83
C9orf47-201ENST00000334490 IGKV2-30P06310 120 aa9.88□□□□□ -0.83
C9orf47-201ENST00000334490 NBEAL1Q6ZS30 2694 aa9.88□□□□□ -0.83
C9orf47-201ENST00000334490 FLNCQ14315 2725 aa9.88□□□□□ -0.83
C9orf47-201ENST00000334490 EIF4EBP3O60516 100 aaPredicted RBP9.87□□□□□ -0.83
C9orf47-201ENST00000334490 KCNQ1DNQ9H478 68 aa9.87□□□□□ -0.83
C9orf47-201ENST00000334490 CASC10Q5T4H9 136 aa9.87□□□□□ -0.83
C9orf47-201ENST00000334490 V9GYY9 64 aa9.87□□□□□ -0.83
C9orf47-201ENST00000334490 A0A1B0GW54 56 aa9.86□□□□□ -0.83
C9orf47-201ENST00000334490 SPINK1P00995 79 aa9.86□□□□□ -0.83
C9orf47-201ENST00000334490 Q6ZQT0 140 aa9.85□□□□□ -0.83
C9orf47-201ENST00000334490 SMR3BP02814 79 aaPredicted RBP9.85□□□□□ -0.83
C9orf47-201ENST00000334490 J3QL48 77 aa9.84□□□□□ -0.83
C9orf47-201ENST00000334490 C9orf129Q5T035 196 aaKnown RBP9.84□□□□□ -0.83
C9orf47-201ENST00000334490 hDV103S1A0JD37 113 aa9.84□□□□□ -0.83
C9orf47-201ENST00000334490 WIPF1O43516 503 aa9.84□□□□□ -0.83
C9orf47-201ENST00000334490 TMEM254Q8TBM7 123 aa9.84□□□□□ -0.83
C9orf47-201ENST00000334490 SZT2Q5T011 3432 aa9.83□□□□□ -0.84
C9orf47-201ENST00000334490 PRO0461Q9UI25 63 aa9.83□□□□□ -0.84
C9orf47-201ENST00000334490 SMIM29Q86T20 159 aa9.83□□□□□ -0.84
C9orf47-201ENST00000334490 TRBV7-7A0A0K0K1E9 115 aa9.83□□□□□ -0.84
C9orf47-201ENST00000334490 LINC00528Q8N1L1 170 aa9.82□□□□□ -0.84
C9orf47-201ENST00000334490 LINC00336Q6ZUF6 198 aa9.82□□□□□ -0.84
C9orf47-201ENST00000334490 LOC110117498A0A087WWA1 95 aa9.81□□□□□ -0.84
C9orf47-201ENST00000334490 ZNF575Q86XF7 245 aa9.81□□□□□ -0.84
C9orf47-201ENST00000334490 C1orf64Q8NEQ6 169 aa9.81□□□□□ -0.84
C9orf47-201ENST00000334490 CDIP1Q9H305 208 aa9.81□□□□□ -0.84
C9orf47-201ENST00000334490 ZNF861PO60384 105 aa9.8□□□□□ -0.84
C9orf47-201ENST00000334490 TLX1NBP0CAT3 122 aa9.8□□□□□ -0.84
C9orf47-201ENST00000334490 FRYLO94915 3013 aa9.8□□□□□ -0.84
C9orf47-201ENST00000334490 A6NED7 52 aa9.79□□□□□ -0.84
C9orf47-201ENST00000334490 LINC00313P59037 77 aa9.79□□□□□ -0.84
C9orf47-201ENST00000334490 FRYQ5TBA9 3013 aa9.78□□□□□ -0.84
C9orf47-201ENST00000334490 TRBV7-4A0A0J9YYF1 115 aa9.77□□□□□ -0.85
C9orf47-201ENST00000334490 TP53AIP1Q9HCN2 124 aa9.77□□□□□ -0.85
C9orf47-201ENST00000334490 A0A1W2PNN7 141 aa9.76□□□□□ -0.85
C9orf47-201ENST00000334490 CNBPP62633 177 aaKnown RBP9.76□□□□□ -0.85
C9orf47-201ENST00000334490 PLA2G2DQ9UNK4 145 aa9.73□□□□□ -0.85
C9orf47-201ENST00000334490 TNP2Q05952 138 aa9.72□□□□□ -0.85
C9orf47-201ENST00000334490 SVIPQ8NHG7 77 aa9.72□□□□□ -0.85
C9orf47-201ENST00000334490 PSORS1C2Q9UIG4 136 aa9.72□□□□□ -0.85
C9orf47-201ENST00000334490 ATMQ13315 3056 aa9.72□□□□□ -0.85
C9orf47-201ENST00000334490 NSD1Q96L73 2696 aaPredicted RBP9.72□□□□□ -0.85
C9orf47-201ENST00000334490 TACC2O95359 2948 aa9.72□□□□□ -0.85
C9orf47-201ENST00000334490 Q96NJ1 140 aa9.72□□□□□ -0.85
C9orf47-201ENST00000334490 ITPR1Q14643 2758 aa9.72□□□□□ -0.85
C9orf47-201ENST00000334490 SMIM26A0A096LP01 95 aa9.71□□□□□ -0.85
C9orf47-201ENST00000334490 SSBP3-AS1Q7Z2R9 100 aa9.71□□□□□ -0.85
C9orf47-201ENST00000334490 ANAPC11Q9NYG5 84 aa9.71□□□□□ -0.86
C9orf47-201ENST00000334490 LAMA1P25391 3075 aa9.7□□□□□ -0.86
C9orf47-201ENST00000334490 IGLV7-43P04211 117 aa9.7□□□□□ -0.86
C9orf47-201ENST00000334490 LINC00304Q8N9R0 145 aa9.7□□□□□ -0.86
C9orf47-201ENST00000334490 IGFL1Q6UW32 110 aa9.7□□□□□ -0.86
C9orf47-201ENST00000334490 COL12A1Q99715 3063 aa9.69□□□□□ -0.86
C9orf47-201ENST00000334490 CELSR3Q9NYQ7 3312 aa9.69□□□□□ -0.86
C9orf47-201ENST00000334490 COL6A3P12111 3177 aa9.69□□□□□ -0.86
C9orf47-201ENST00000334490 Q8N377 158 aa9.69□□□□□ -0.86
C9orf47-201ENST00000334490 C7orf65Q6ZTY9 151 aa9.68□□□□□ -0.86
C9orf47-201ENST00000334490 NBEAL2Q6ZNJ1 2754 aa9.67□□□□□ -0.86
C9orf47-201ENST00000334490 ATP11AUNQ6ZP68 121 aa9.67□□□□□ -0.86
C9orf47-201ENST00000334490 ITPR2Q14571 2701 aa9.67□□□□□ -0.86
C9orf47-201ENST00000334490 REV3LO60673 3130 aa9.66□□□□□ -0.86
C9orf47-201ENST00000334490 A0A0G2JQZ4 141 aa9.65□□□□□ -0.86
C9orf47-201ENST00000334490 A8MWP4 228 aa9.65□□□□□ -0.86
C9orf47-201ENST00000334490 TRAV22A0A0B4J277 110 aa9.65□□□□□ -0.86
C9orf47-201ENST00000334490 SPAG11AQ6PDA7 123 aa9.65□□□□□ -0.86
C9orf47-201ENST00000334490 DMXL2Q8TDJ6 3036 aa9.64□□□□□ -0.87
C9orf47-201ENST00000334490 C8orf87E5RJ46 101 aa9.63□□□□□ -0.87
C9orf47-201ENST00000334490 ERC2-IT1O76042 136 aa9.63□□□□□ -0.87
C9orf47-201ENST00000334490 A0A0U1RQV1 116 aa9.63□□□□□ -0.87
C9orf47-201ENST00000334490 K7EQZ3 153 aa9.63□□□□□ -0.87
C9orf47-201ENST00000334490 VCANP13611 3396 aa9.63□□□□□ -0.87
C9orf47-201ENST00000334490 SPRR4Q96PI1 79 aa9.6□□□□□ -0.87
C9orf47-201ENST00000334490 MRPL34Q9BQ48 92 aaKnown RBP9.6□□□□□ -0.87
C9orf47-201ENST00000334490 BOD1L1Q8NFC6 3051 aa9.58□□□□□ -0.88
C9orf47-201ENST00000334490 H3BPC8 53 aa9.57□□□□□ -0.88
C9orf47-201ENST00000334490 PSPHP1O15172 72 aa9.57□□□□□ -0.88
C9orf47-201ENST00000334490 ACYP2P14621 99 aa9.57□□□□□ -0.88
C9orf47-201ENST00000334490 DSCR10P59022 87 aa9.57□□□□□ -0.88
C9orf47-201ENST00000334490 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.56□□□□□ -0.88
C9orf47-201ENST00000334490 IGLV5-37A0A075B6J1 123 aa9.55□□□□□ -0.88
C9orf47-201ENST00000334490 OBSCN-AS1Q96MR7 158 aa9.55□□□□□ -0.88
C9orf47-201ENST00000334490 C9orf92A6NGG3 77 aa9.55□□□□□ -0.88
C9orf47-201ENST00000334490 FAM104AQ969W3 186 aa9.54□□□□□ -0.88
C9orf47-201ENST00000334490 HIVEP1P15822 2718 aa9.54□□□□□ -0.88
C9orf47-201ENST00000334490 TNRC18O15417 2968 aaPredicted RBP9.54□□□□□ -0.88
C9orf47-201ENST00000334490 PRR15Q8IV56 129 aa9.53□□□□□ -0.88
C9orf47-201ENST00000334490 C8orf17Q9NRJ1 99 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms