RNA–Protein interactions for RNA: ENST00000333990.10

POLR1B-202, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 4,376 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-202ENST00000333990 CXCL6P80162 114 aa7.37□□□□□ -1.23
POLR1B-202ENST00000333990 FAM236DA0A1B0GTK5 79 aa7.36□□□□□ -1.23
POLR1B-202ENST00000333990 FAM236CP0DP71 79 aa7.36□□□□□ -1.23
POLR1B-202ENST00000333990 COX7CP15954 63 aa7.36□□□□□ -1.23
POLR1B-202ENST00000333990 FAM30AQ9NZY2 134 aa7.36□□□□□ -1.23
POLR1B-202ENST00000333990 SZT2Q5T011 3432 aa7.35□□□□□ -1.23
POLR1B-202ENST00000333990 FRYLO94915 3013 aa7.34□□□□□ -1.23
POLR1B-202ENST00000333990 HCG22E2RYF7 251 aa7.34□□□□□ -1.23
POLR1B-202ENST00000333990 LINC00528Q8N1L1 170 aa7.34□□□□□ -1.23
POLR1B-202ENST00000333990 LINC00208Q96KT6 92 aa7.34□□□□□ -1.23
POLR1B-202ENST00000333990 ZNF861PO60384 105 aa7.34□□□□□ -1.23
POLR1B-202ENST00000333990 DEFB116Q30KQ4 102 aa7.34□□□□□ -1.23
POLR1B-202ENST00000333990 ST20-AS1Q8NBB2 130 aa7.34□□□□□ -1.24
POLR1B-202ENST00000333990 LOC110117498A0A087WWA1 95 aa7.33□□□□□ -1.24
POLR1B-202ENST00000333990 SPTSSBQ8NFR3 76 aa7.33□□□□□ -1.24
POLR1B-202ENST00000333990 ITPR2Q14571 2701 aa7.33□□□□□ -1.24
POLR1B-202ENST00000333990 C9orf129Q5T035 196 aaKnown RBP7.33□□□□□ -1.24
POLR1B-202ENST00000333990 CASC10Q5T4H9 136 aa7.32□□□□□ -1.24
POLR1B-202ENST00000333990 A0A087WVE0 104 aa7.32□□□□□ -1.24
POLR1B-202ENST00000333990 SSBP3-AS1Q7Z2R9 100 aa7.31□□□□□ -1.24
POLR1B-202ENST00000333990 SNURFQ9Y675 71 aa7.31□□□□□ -1.24
POLR1B-202ENST00000333990 TRBV7-4A0A0J9YYF1 115 aa7.3□□□□□ -1.24
POLR1B-202ENST00000333990 Q6ZQT0 140 aa7.3□□□□□ -1.24
POLR1B-202ENST00000333990 J3QL48 77 aa7.29□□□□□ -1.24
POLR1B-202ENST00000333990 SPAG11AQ6PDA7 123 aa7.29□□□□□ -1.24
POLR1B-202ENST00000333990 COL6A3P12111 3177 aa7.28□□□□□ -1.24
POLR1B-202ENST00000333990 SMCPP49901 116 aaPredicted RBP7.28□□□□□ -1.24
POLR1B-202ENST00000333990 NBEAL1Q6ZS30 2694 aa7.28□□□□□ -1.24
POLR1B-202ENST00000333990 TP53AIP1Q9HCN2 124 aa7.28□□□□□ -1.24
POLR1B-202ENST00000333990 PRO0461Q9UI25 63 aa7.28□□□□□ -1.24
POLR1B-202ENST00000333990 ITPR1Q14643 2758 aa7.28□□□□□ -1.24
POLR1B-202ENST00000333990 PRR15LQ9BU68 103 aa7.27□□□□□ -1.25
POLR1B-202ENST00000333990 V9GYY9 64 aa7.27□□□□□ -1.25
POLR1B-202ENST00000333990 H0Y9P7 68 aa7.27□□□□□ -1.25
POLR1B-202ENST00000333990 EIF4EBP3O60516 100 aaPredicted RBP7.27□□□□□ -1.25
POLR1B-202ENST00000333990 TNP2Q05952 138 aa7.26□□□□□ -1.25
POLR1B-202ENST00000333990 SERP1Q9Y6X1 66 aa7.26□□□□□ -1.25
POLR1B-202ENST00000333990 LAMA1P25391 3075 aa7.26□□□□□ -1.25
POLR1B-202ENST00000333990 IGLV5-37A0A075B6J1 123 aa7.25□□□□□ -1.25
POLR1B-202ENST00000333990 hDV103S1A0JD37 113 aa7.25□□□□□ -1.25
POLR1B-202ENST00000333990 IGLV7-43P04211 117 aa7.25□□□□□ -1.25
POLR1B-202ENST00000333990 DMXL2Q8TDJ6 3036 aa7.25□□□□□ -1.25
POLR1B-202ENST00000333990 TRBV7-7A0A0K0K1E9 115 aa7.25□□□□□ -1.25
POLR1B-202ENST00000333990 A0A1W2PNN7 141 aa7.25□□□□□ -1.25
POLR1B-202ENST00000333990 ATMQ13315 3056 aa7.25□□□□□ -1.25
POLR1B-202ENST00000333990 CCDC179H3BU77 68 aa7.25□□□□□ -1.25
POLR1B-202ENST00000333990 FRYQ5TBA9 3013 aa7.24□□□□□ -1.25
POLR1B-202ENST00000333990 PSORS1C2Q9UIG4 136 aa7.24□□□□□ -1.25
POLR1B-202ENST00000333990 PRR4Q16378 134 aa7.24□□□□□ -1.25
POLR1B-202ENST00000333990 HIVEP1P15822 2718 aa7.24□□□□□ -1.25
POLR1B-202ENST00000333990 COL12A1Q99715 3063 aa7.23□□□□□ -1.25
POLR1B-202ENST00000333990 FREM2Q5SZK8 3169 aa7.23□□□□□ -1.25
POLR1B-202ENST00000333990 DNAH14Q0VDD8 3507 aa7.23□□□□□ -1.25
POLR1B-202ENST00000333990 NSD1Q96L73 2696 aaPredicted RBP7.23□□□□□ -1.25
POLR1B-202ENST00000333990 SMR3BP02814 79 aaPredicted RBP7.23□□□□□ -1.25
POLR1B-202ENST00000333990 LINC00313P59037 77 aa7.23□□□□□ -1.25
POLR1B-202ENST00000333990 C8orf87E5RJ46 101 aa7.22□□□□□ -1.25
POLR1B-202ENST00000333990 K7ERS5 55 aa7.22□□□□□ -1.25
POLR1B-202ENST00000333990 LINC00304Q8N9R0 145 aa7.22□□□□□ -1.25
POLR1B-202ENST00000333990 RETNLBQ9BQ08 111 aa7.22□□□□□ -1.25
POLR1B-202ENST00000333990 KMT2BQ9UMN6 2715 aaPredicted RBP7.21□□□□□ -1.25
POLR1B-202ENST00000333990 TMEM254Q8TBM7 123 aa7.21□□□□□ -1.25
POLR1B-202ENST00000333990 Q8N377 158 aa7.2□□□□□ -1.26
POLR1B-202ENST00000333990 CDIP1Q9H305 208 aa7.2□□□□□ -1.26
POLR1B-202ENST00000333990 IGKV2D-30A0A075B6S6 120 aa7.19□□□□□ -1.26
POLR1B-202ENST00000333990 IGKV2-30P06310 120 aa7.19□□□□□ -1.26
POLR1B-202ENST00000333990 PCOTHQ58A44 107 aa7.19□□□□□ -1.26
POLR1B-202ENST00000333990 SMIM29Q86T20 159 aa7.19□□□□□ -1.26
POLR1B-202ENST00000333990 C1orf64Q8NEQ6 169 aa7.19□□□□□ -1.26
POLR1B-202ENST00000333990 KRTAP21-3Q3LHN1 58 aa7.18□□□□□ -1.26
POLR1B-202ENST00000333990 IGFL1Q6UW32 110 aa7.18□□□□□ -1.26
POLR1B-202ENST00000333990 SPRR4Q96PI1 79 aa7.18□□□□□ -1.26
POLR1B-202ENST00000333990 UTP20O75691 2785 aaKnown RBP7.18□□□□□ -1.26
POLR1B-202ENST00000333990 A8MWP4 228 aa7.17□□□□□ -1.26
POLR1B-202ENST00000333990 H3BPC8 53 aa7.17□□□□□ -1.26
POLR1B-202ENST00000333990 VCANP13611 3396 aa7.16□□□□□ -1.26
POLR1B-202ENST00000333990 APCP25054 2843 aa7.16□□□□□ -1.26
POLR1B-202ENST00000333990 FAM104AQ969W3 186 aa7.16□□□□□ -1.26
POLR1B-202ENST00000333990 MPLKIPQ8TAP9 179 aa7.15□□□□□ -1.26
POLR1B-202ENST00000333990 ATP11AUNQ6ZP68 121 aa7.15□□□□□ -1.27
POLR1B-202ENST00000333990 TACC2O95359 2948 aa7.15□□□□□ -1.27
POLR1B-202ENST00000333990 REV3LO60673 3130 aa7.14□□□□□ -1.27
POLR1B-202ENST00000333990 TRAV22A0A0B4J277 110 aa7.13□□□□□ -1.27
POLR1B-202ENST00000333990 Q96NJ1 140 aa7.13□□□□□ -1.27
POLR1B-202ENST00000333990 LCE6AA0A183 80 aa7.13□□□□□ -1.27
POLR1B-202ENST00000333990 USP34Q70CQ2 3546 aa7.12□□□□□ -1.27
POLR1B-202ENST00000333990 ADGRG4Q8IZF6 3080 aa7.11□□□□□ -1.27
POLR1B-202ENST00000333990 ERC2-IT1O76042 136 aa7.11□□□□□ -1.27
POLR1B-202ENST00000333990 MRPL34Q9BQ48 92 aaKnown RBP7.11□□□□□ -1.27
POLR1B-202ENST00000333990 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.11□□□□□ -1.27
POLR1B-202ENST00000333990 BOD1L1Q8NFC6 3051 aa7.11□□□□□ -1.27
POLR1B-202ENST00000333990 NBEAL2Q6ZNJ1 2754 aa7.11□□□□□ -1.27
POLR1B-202ENST00000333990 SPINK1P00995 79 aa7.11□□□□□ -1.27
POLR1B-202ENST00000333990 SMIM26A0A096LP01 95 aa7.11□□□□□ -1.27
POLR1B-202ENST00000333990 PLAC8Q9NZF1 115 aa7.1□□□□□ -1.27
POLR1B-202ENST00000333990 EYSQ5T1H1 3165 aa7.1□□□□□ -1.27
POLR1B-202ENST00000333990 NBEAQ8NFP9 2946 aa7.08□□□□□ -1.28
POLR1B-202ENST00000333990 PRR15Q8IV56 129 aa7.08□□□□□ -1.28
POLR1B-202ENST00000333990 CELSR3Q9NYQ7 3312 aa7.08□□□□□ -1.28
POLR1B-202ENST00000333990 KALRNO60229 2985 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms