RNA–Protein interactions for RNA: ENST00000333254.3

CCDC172-201, Transcript of coiled-coil domain containing 172, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC172, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172-201ENST00000333254 SPRR1AP35321 89 aa7□□□□□ -1.29
CCDC172-201ENST00000333254 SMIM20Q8N5G0 67 aa7□□□□□ -1.29
CCDC172-201ENST00000333254 C7orf33Q8WU49 177 aa7□□□□□ -1.29
CCDC172-201ENST00000333254 M0R2N4 97 aa6.99□□□□□ -1.29
CCDC172-201ENST00000333254 DHRS4-AS1Q9P1J3 65 aa6.99□□□□□ -1.29
CCDC172-201ENST00000333254 KRTAP4-16G5E9R7 235 aaPredicted RBP6.98□□□□□ -1.29
CCDC172-201ENST00000333254 FAM19A1Q7Z5A9 133 aa6.98□□□□□ -1.29
CCDC172-201ENST00000333254 MAST4O15021 2626 aa6.98□□□□□ -1.29
CCDC172-201ENST00000333254 J3QL48 77 aa6.97□□□□□ -1.29
CCDC172-201ENST00000333254 SERTAD4-AS1Q5TG53 156 aa6.97□□□□□ -1.29
CCDC172-201ENST00000333254 IGLV5-48A0A075B6I7 105 aa6.96□□□□□ -1.29
CCDC172-201ENST00000333254 TMEM258P61165 79 aa6.96□□□□□ -1.29
CCDC172-201ENST00000333254 Q6ZRX8 168 aa6.96□□□□□ -1.29
CCDC172-201ENST00000333254 CMYA5Q8N3K9 4069 aa6.96□□□□□ -1.3
CCDC172-201ENST00000333254 IGLV1-50A0A075B6I6 118 aa6.96□□□□□ -1.3
CCDC172-201ENST00000333254 STAB1Q9NY15 2570 aa6.95□□□□□ -1.3
CCDC172-201ENST00000333254 LOC107984640A0A0U1RRK4 108 aa6.95□□□□□ -1.3
CCDC172-201ENST00000333254 K7EIL1 84 aa6.95□□□□□ -1.3
CCDC172-201ENST00000333254 TRAV7A0A075B6U4 112 aa6.94□□□□□ -1.3
CCDC172-201ENST00000333254 PKD1L1Q8TDX9 2849 aa6.94□□□□□ -1.3
CCDC172-201ENST00000333254 RPS28P62857 69 aaKnown RBP6.93□□□□□ -1.3
CCDC172-201ENST00000333254 HAMPP81172 84 aa6.93□□□□□ -1.3
CCDC172-201ENST00000333254 BAHCC1Q9P281 2608 aa6.93□□□□□ -1.3
CCDC172-201ENST00000333254 Q8N377 158 aa6.93□□□□□ -1.3
CCDC172-201ENST00000333254 TNP2Q05952 138 aa6.92□□□□□ -1.3
CCDC172-201ENST00000333254 ETDCA0A1B0GVM5 59 aa6.91□□□□□ -1.3
CCDC172-201ENST00000333254 MRPL55Q7Z7F7 128 aaKnown RBP6.91□□□□□ -1.3
CCDC172-201ENST00000333254 CASC10Q5T4H9 136 aa6.9□□□□□ -1.3
CCDC172-201ENST00000333254 LCE2CQ5TA81 110 aa6.9□□□□□ -1.3
CCDC172-201ENST00000333254 KRTAP7-1Q8IUC3 87 aa6.9□□□□□ -1.3
CCDC172-201ENST00000333254 J3KT08 172 aa6.9□□□□□ -1.31
CCDC172-201ENST00000333254 CNBPP62633 177 aaKnown RBP6.9□□□□□ -1.31
CCDC172-201ENST00000333254 Q9BRP9 147 aa6.9□□□□□ -1.31
CCDC172-201ENST00000333254 FBN1P35555 2871 aaKnown RBP6.89□□□□□ -1.31
CCDC172-201ENST00000333254 CYSTM1Q9H1C7 97 aa6.88□□□□□ -1.31
CCDC172-201ENST00000333254 FLNBO75369 2602 aaKnown RBP6.88□□□□□ -1.31
CCDC172-201ENST00000333254 FAM168BA1KXE4 195 aa6.87□□□□□ -1.31
CCDC172-201ENST00000333254 KLKP1Q107X0 134 aa6.87□□□□□ -1.31
CCDC172-201ENST00000333254 C16orf90A8MZG2 172 aa6.87□□□□□ -1.31
CCDC172-201ENST00000333254 ERC2-IT1O76042 136 aa6.87□□□□□ -1.31
CCDC172-201ENST00000333254 FUSP35637 526 aaKnown RBP eCLIP6.87□□□□□ -1.31
CCDC172-201ENST00000333254 NREPQ16612 68 aa6.87□□□□□ -1.31
CCDC172-201ENST00000333254 C14orf177Q52M58 125 aa6.87□□□□□ -1.31
CCDC172-201ENST00000333254 SPRR4Q96PI1 79 aa6.87□□□□□ -1.31
CCDC172-201ENST00000333254 REG3GQ6UW15 175 aa6.86□□□□□ -1.31
CCDC172-201ENST00000333254 Q8NBF4 154 aa6.86□□□□□ -1.31
CCDC172-201ENST00000333254 PKIGQ9Y2B9 76 aa6.86□□□□□ -1.31
CCDC172-201ENST00000333254 DNAH1Q9P2D7 4330 aa6.86□□□□□ -1.31
CCDC172-201ENST00000333254 ANK2Q01484 3957 aa6.85□□□□□ -1.31
CCDC172-201ENST00000333254 RPL37AP8A6NKH3 93 aa6.85□□□□□ -1.31
CCDC172-201ENST00000333254 IGKV4-1P06312 121 aa6.85□□□□□ -1.31
CCDC172-201ENST00000333254 PRB2P02812 416 aaPredicted RBP6.84□□□□□ -1.31
CCDC172-201ENST00000333254 FAM19A5Q7Z5A7 132 aaPredicted RBP6.84□□□□□ -1.31
CCDC172-201ENST00000333254 NOTCH1P46531 2555 aa6.84□□□□□ -1.31
CCDC172-201ENST00000333254 A0A1W2PNM2 257 aa6.84□□□□□ -1.32
CCDC172-201ENST00000333254 C1orf137Q5JT78 98 aa6.84□□□□□ -1.32
CCDC172-201ENST00000333254 C20orf197Q8N268 126 aa6.84□□□□□ -1.32
CCDC172-201ENST00000333254 APLNQ9ULZ1 77 aa6.84□□□□□ -1.32
CCDC172-201ENST00000333254 BPY2O14599 106 aa6.83□□□□□ -1.32
CCDC172-201ENST00000333254 DEFB105AQ8NG35 78 aa6.83□□□□□ -1.32
CCDC172-201ENST00000333254 DPH3Q96FX2 82 aa6.83□□□□□ -1.32
CCDC172-201ENST00000333254 HUWE1Q7Z6Z7 4374 aaKnown RBP6.82□□□□□ -1.32
CCDC172-201ENST00000333254 IGLV8-61A0A075B6I0 122 aa6.82□□□□□ -1.32
CCDC172-201ENST00000333254 NDUFC1O43677 76 aa6.82□□□□□ -1.32
CCDC172-201ENST00000333254 KRTAP1-5Q9BYS1 174 aa6.82□□□□□ -1.32
CCDC172-201ENST00000333254 NBEAL1Q6ZS30 2694 aa6.82□□□□□ -1.32
CCDC172-201ENST00000333254 A0A096LNI7 61 aa6.81□□□□□ -1.32
CCDC172-201ENST00000333254 UBE2BP63146 152 aa6.81□□□□□ -1.32
CCDC172-201ENST00000333254 SCXQ7RTU7 201 aa6.81□□□□□ -1.32
CCDC172-201ENST00000333254 H0Y9J4 135 aa6.81□□□□□ -1.32
CCDC172-201ENST00000333254 H7BZZ5 65 aa6.81□□□□□ -1.32
CCDC172-201ENST00000333254 SMIM29Q86T20 159 aa6.81□□□□□ -1.32
CCDC172-201ENST00000333254 ST20-AS1Q8NBB2 130 aa6.81□□□□□ -1.32
CCDC172-201ENST00000333254 C3orf84H3BNL1 204 aa6.8□□□□□ -1.32
CCDC172-201ENST00000333254 B9D2Q9BPU9 175 aa6.8□□□□□ -1.32
CCDC172-201ENST00000333254 COL6A5A8TX70 2615 aa6.79□□□□□ -1.32
CCDC172-201ENST00000333254 UBE2DNLQ8IWF7 75 aa6.79□□□□□ -1.32
CCDC172-201ENST00000333254 FAM236DA0A1B0GTK5 79 aa6.78□□□□□ -1.32
CCDC172-201ENST00000333254 F8WEM9 126 aa6.78□□□□□ -1.32
CCDC172-201ENST00000333254 PSCAO43653 123 aa6.78□□□□□ -1.32
CCDC172-201ENST00000333254 FAM236CP0DP71 79 aa6.78□□□□□ -1.32
CCDC172-201ENST00000333254 LORP23490 312 aaPredicted RBP6.78□□□□□ -1.32
CCDC172-201ENST00000333254 ATP5EP56381 51 aaPredicted RBP6.78□□□□□ -1.32
CCDC172-201ENST00000333254 OCR1Q9BZK8 76 aa6.78□□□□□ -1.32
CCDC172-201ENST00000333254 SPRR1BP22528 89 aa6.77□□□□□ -1.32
CCDC172-201ENST00000333254 A0A1W2PNN7 141 aa6.77□□□□□ -1.33
CCDC172-201ENST00000333254 EPM2AB3EWF7 344 aa6.77□□□□□ -1.33
CCDC172-201ENST00000333254 C9orf163Q8N9P6 203 aa6.77□□□□□ -1.33
CCDC172-201ENST00000333254 LINC00476Q8WZB0 136 aa6.76□□□□□ -1.33
CCDC172-201ENST00000333254 NUPR2A6NF83 97 aa6.75□□□□□ -1.33
CCDC172-201ENST00000333254 LINC00474Q9P2X8 69 aa6.75□□□□□ -1.33
CCDC172-201ENST00000333254 TMEM254Q8TBM7 123 aa6.74□□□□□ -1.33
CCDC172-201ENST00000333254 DYNC2H1Q8NCM8 4307 aaKnown RBP6.74□□□□□ -1.33
CCDC172-201ENST00000333254 LCE6AA0A183 80 aa6.74□□□□□ -1.33
CCDC172-201ENST00000333254 LRCOL1A6NCL2 159 aa6.74□□□□□ -1.33
CCDC172-201ENST00000333254 Q8N9L7 120 aa6.74□□□□□ -1.33
CCDC172-201ENST00000333254 SERP1Q9Y6X1 66 aa6.74□□□□□ -1.33
CCDC172-201ENST00000333254 IGKV2-24A0A0C4DH68 120 aa6.73□□□□□ -1.33
CCDC172-201ENST00000333254 NBDYA0A0U1RRE5 68 aa6.73□□□□□ -1.33
CCDC172-201ENST00000333254 DSCR10P59022 87 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms