RNA–Protein interactions for RNA: ENST00000331450.9

LRRC28-202, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 752 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-202ENST00000331450 DIRC1Q969H9 104 aa9.72□□□□□ -0.85
LRRC28-202ENST00000331450 UBE2AP49459 152 aa9.71□□□□□ -0.86
LRRC28-202ENST00000331450 CBY1Q9Y3M2 126 aa9.71□□□□□ -0.86
LRRC28-202ENST00000331450 TRAV13-2A0A0B4J235 113 aa9.7□□□□□ -0.86
LRRC28-202ENST00000331450 ZNF73O43830 326 aaPredicted RBP9.7□□□□□ -0.86
LRRC28-202ENST00000331450 CEND1Q8N111 149 aa9.7□□□□□ -0.86
LRRC28-202ENST00000331450 C12orf57Q99622 126 aa9.7□□□□□ -0.86
LRRC28-202ENST00000331450 PRO1933Q9H354 126 aa9.7□□□□□ -0.86
LRRC28-202ENST00000331450 ETDCA0A1B0GVM5 59 aa9.69□□□□□ -0.86
LRRC28-202ENST00000331450 B5MCH6 92 aa9.69□□□□□ -0.86
LRRC28-202ENST00000331450 HSD52Q0P140 79 aa9.69□□□□□ -0.86
LRRC28-202ENST00000331450 PCLOQ9Y6V0 5065 aa9.68□□□□□ -0.86
LRRC28-202ENST00000331450 A6NDN8 102 aa9.68□□□□□ -0.86
LRRC28-202ENST00000331450 Q6ZRX8 168 aa9.67□□□□□ -0.86
LRRC28-202ENST00000331450 FLG2Q5D862 2391 aaPredicted RBP9.67□□□□□ -0.86
LRRC28-202ENST00000331450 FXYD2P54710 66 aa9.66□□□□□ -0.86
LRRC28-202ENST00000331450 A0A0B4J2C4 111 aa9.65□□□□□ -0.86
LRRC28-202ENST00000331450 KRTAP29-1A8MX34 341 aaPredicted RBP9.65□□□□□ -0.86
LRRC28-202ENST00000331450 KRTAP1-4P0C5Y4 121 aa9.65□□□□□ -0.86
LRRC28-202ENST00000331450 CFC1BP0CG36 223 aa9.65□□□□□ -0.86
LRRC28-202ENST00000331450 CFC1P0CG37 223 aa9.65□□□□□ -0.86
LRRC28-202ENST00000331450 C6orf99Q4VX62 202 aa9.65□□□□□ -0.86
LRRC28-202ENST00000331450 OXTP01178 125 aa9.64□□□□□ -0.87
LRRC28-202ENST00000331450 SMIM11BQ8TCY0 68 aa9.64□□□□□ -0.87
LRRC28-202ENST00000331450 SMCR5Q8TEV8 140 aa9.64□□□□□ -0.87
LRRC28-202ENST00000331450 Q9BRP9 147 aa9.64□□□□□ -0.87
LRRC28-202ENST00000331450 HIGD2AQ9BW72 106 aa9.64□□□□□ -0.87
LRRC28-202ENST00000331450 MYCBP2O75592 4640 aa9.63□□□□□ -0.87
LRRC28-202ENST00000331450 TMEM238LA0A1B0GVL6 79 aa9.63□□□□□ -0.87
LRRC28-202ENST00000331450 A6NJY4 79 aa9.63□□□□□ -0.87
LRRC28-202ENST00000331450 RPL13AP40429 203 aaKnown RBP9.63□□□□□ -0.87
LRRC28-202ENST00000331450 TRBV7-6A0A0J9YX20 115 aa9.62□□□□□ -0.87
LRRC28-202ENST00000331450 ELOF1P60002 83 aaKnown RBP9.62□□□□□ -0.87
LRRC28-202ENST00000331450 LINC01600Q96MT4 127 aa9.62□□□□□ -0.87
LRRC28-202ENST00000331450 TSTD3H0UI37 97 aa9.61□□□□□ -0.87
LRRC28-202ENST00000331450 HINT1P49773 126 aaPredicted RBP9.6□□□□□ -0.87
LRRC28-202ENST00000331450 RAB37Q96AX2 223 aa9.6□□□□□ -0.87
LRRC28-202ENST00000331450 LRP1Q07954 4544 aaKnown RBP9.59□□□□□ -0.87
LRRC28-202ENST00000331450 ERC2-IT1O76042 136 aa9.59□□□□□ -0.87
LRRC28-202ENST00000331450 COX7BP24311 80 aa9.59□□□□□ -0.87
LRRC28-202ENST00000331450 FAT3Q8TDW7 4589 aa9.58□□□□□ -0.88
LRRC28-202ENST00000331450 A0A1B0GWB2 263 aa9.58□□□□□ -0.88
LRRC28-202ENST00000331450 MT1HL1P0DM35 61 aa9.58□□□□□ -0.88
LRRC28-202ENST00000331450 BVES-AS1Q5T3Y7 98 aa9.57□□□□□ -0.88
LRRC28-202ENST00000331450 SPRR4Q96PI1 79 aa9.57□□□□□ -0.88
LRRC28-202ENST00000331450 NHP2Q9NX24 153 aaKnown RBP9.57□□□□□ -0.88
LRRC28-202ENST00000331450 PRO1854Q9UHT4 67 aa9.57□□□□□ -0.88
LRRC28-202ENST00000331450 CTAG1AP78358 180 aa9.56□□□□□ -0.88
LRRC28-202ENST00000331450 DHRS4-AS1Q9P1J3 65 aa9.55□□□□□ -0.88
LRRC28-202ENST00000331450 H7C2G1 150 aa9.54□□□□□ -0.88
LRRC28-202ENST00000331450 K7ERJ3 54 aa9.54□□□□□ -0.88
LRRC28-202ENST00000331450 KRTAP10-8P60410 259 aa9.54□□□□□ -0.88
LRRC28-202ENST00000331450 ZNF706Q9Y5V0 76 aaPredicted RBP9.54□□□□□ -0.88
LRRC28-202ENST00000331450 A0A087X002 238 aa9.53□□□□□ -0.88
LRRC28-202ENST00000331450 FAM229BQ4G0N7 80 aa9.53□□□□□ -0.88
LRRC28-202ENST00000331450 PRR26Q8N8Z3 221 aa9.53□□□□□ -0.88
LRRC28-202ENST00000331450 M0R143 59 aa9.52□□□□□ -0.89
LRRC28-202ENST00000331450 ANAPC11Q9NYG5 84 aa9.52□□□□□ -0.89
LRRC28-202ENST00000331450 VAMP3Q15836 100 aa9.51□□□□□ -0.89
LRRC28-202ENST00000331450 LINC00483Q53H64 154 aa9.51□□□□□ -0.89
LRRC28-202ENST00000331450 J3QL48 77 aa9.5□□□□□ -0.89
LRRC28-202ENST00000331450 LINC00575Q6W349 94 aa9.5□□□□□ -0.89
LRRC28-202ENST00000331450 ST20-AS1Q8NBB2 130 aa9.5□□□□□ -0.89
LRRC28-202ENST00000331450 Q1RN00 199 aa9.49□□□□□ -0.89
LRRC28-202ENST00000331450 KRTAP13-2Q52LG2 175 aa9.49□□□□□ -0.89
LRRC28-202ENST00000331450 TSPAN13O95857 204 aa9.48□□□□□ -0.89
LRRC28-202ENST00000331450 CRYGAP11844 174 aa9.48□□□□□ -0.89
LRRC28-202ENST00000331450 SPRR1BP22528 89 aa9.47□□□□□ -0.89
LRRC28-202ENST00000331450 GAGE2AQ6NT46 116 aa9.47□□□□□ -0.89
LRRC28-202ENST00000331450 TRIAP1O43715 76 aa9.46□□□□□ -0.9
LRRC28-202ENST00000331450 IGLV5-48A0A075B6I7 105 aa9.44□□□□□ -0.9
LRRC28-202ENST00000331450 H0YGX0 51 aa9.44□□□□□ -0.9
LRRC28-202ENST00000331450 SLC25A20O43772 301 aa9.44□□□□□ -0.9
LRRC28-202ENST00000331450 LINC01547P58512 204 aaPredicted RBP9.44□□□□□ -0.9
LRRC28-202ENST00000331450 hADV29S1A0JD25 119 aa9.43□□□□□ -0.9
LRRC28-202ENST00000331450 C3orf22Q8N5N4 141 aa9.43□□□□□ -0.9
LRRC28-202ENST00000331450 FAM218AQ96MZ4 157 aa9.43□□□□□ -0.9
LRRC28-202ENST00000331450 DMBT1Q9UGM3 2413 aaPredicted RBP9.43□□□□□ -0.9
LRRC28-202ENST00000331450 TYMSOSQ8TAI1 123 aa9.42□□□□□ -0.9
LRRC28-202ENST00000331450 TNXBP22105 4242 aa9.4□□□□□ -0.9
LRRC28-202ENST00000331450 PSMB2P49721 201 aa9.4□□□□□ -0.9
LRRC28-202ENST00000331450 Q6ZQY7 126 aa9.4□□□□□ -0.9
LRRC28-202ENST00000331450 TEX49A0A1B0GTD5 131 aa9.39□□□□□ -0.91
LRRC28-202ENST00000331450 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.39□□□□□ -0.91
LRRC28-202ENST00000331450 A0A1B0GX51 115 aa9.38□□□□□ -0.91
LRRC28-202ENST00000331450 BATFQ16520 125 aa9.38□□□□□ -0.91
LRRC28-202ENST00000331450 Q8N377 158 aa9.38□□□□□ -0.91
LRRC28-202ENST00000331450 DEFB105AQ8NG35 78 aa9.38□□□□□ -0.91
LRRC28-202ENST00000331450 CLEC2BQ92478 149 aa9.38□□□□□ -0.91
LRRC28-202ENST00000331450 SMIM29Q86T20 159 aa9.37□□□□□ -0.91
LRRC28-202ENST00000331450 IGLV9-49A0A0B4J1Y8 123 aa9.36□□□□□ -0.91
LRRC28-202ENST00000331450 COX6CP09669 75 aa9.36□□□□□ -0.91
LRRC28-202ENST00000331450 MOBPQ13875 183 aa9.35□□□□□ -0.91
LRRC28-202ENST00000331450 SNHG12Q9BXW3 62 aa9.34□□□□□ -0.91
LRRC28-202ENST00000331450 LAMTOR3Q9UHA4 124 aa9.34□□□□□ -0.91
LRRC28-202ENST00000331450 SNCGO76070 127 aa9.33□□□□□ -0.92
LRRC28-202ENST00000331450 Q8NBF4 154 aa9.33□□□□□ -0.92
LRRC28-202ENST00000331450 PPDPFLQ8WWR9 84 aa9.33□□□□□ -0.92
LRRC28-202ENST00000331450 NAA38Q9BRA0 125 aaKnown RBP9.33□□□□□ -0.92
LRRC28-202ENST00000331450 OCIAD2Q56VL3 154 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 141.4 ms