RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 TENM1Q9UKZ4 2725 aa16.19■□□□□ 0.18
SOX1-201ENST00000330949 KRTAP1-1Q07627 177 aa16.19■□□□□ 0.18
SOX1-201ENST00000330949 C3orf84H3BNL1 204 aa16.19■□□□□ 0.18
SOX1-201ENST00000330949 SMIM29Q86T20 159 aa16.18■□□□□ 0.18
SOX1-201ENST00000330949 LINC00528Q8N1L1 170 aa16.18■□□□□ 0.18
SOX1-201ENST00000330949 C1orf64Q8NEQ6 169 aa16.18■□□□□ 0.18
SOX1-201ENST00000330949 FAM30AQ9NZY2 134 aa16.18■□□□□ 0.18
SOX1-201ENST00000330949 KLK12Q9UKR0 248 aa16.18■□□□□ 0.18
SOX1-201ENST00000330949 C6orf48Q9UBA6 75 aa16.17■□□□□ 0.18
SOX1-201ENST00000330949 OTOGQ6ZRI0 2925 aa16.17■□□□□ 0.18
SOX1-201ENST00000330949 TRRAPQ9Y4A5 3859 aa16.16■□□□□ 0.18
SOX1-201ENST00000330949 LRCOL1A6NCL2 159 aa16.15■□□□□ 0.18
SOX1-201ENST00000330949 BAHCC1Q9P281 2608 aa16.14■□□□□ 0.17
SOX1-201ENST00000330949 ATRQ13535 2644 aa16.14■□□□□ 0.17
SOX1-201ENST00000330949 VPREB1P12018 145 aa16.13■□□□□ 0.17
SOX1-201ENST00000330949 M0R378 163 aa16.13■□□□□ 0.17
SOX1-201ENST00000330949 A0A1B0GW54 56 aa16.09■□□□□ 0.17
SOX1-201ENST00000330949 ZCCHC13Q8WW36 166 aaKnown RBP16.09■□□□□ 0.17
SOX1-201ENST00000330949 PSPHP1O15172 72 aa16.07■□□□□ 0.16
SOX1-201ENST00000330949 TRAV22A0A0B4J277 110 aa16.06■□□□□ 0.16
SOX1-201ENST00000330949 KRTAP10-3P60369 221 aa16.06■□□□□ 0.16
SOX1-201ENST00000330949 PRR34Q9NV39 138 aa16.06■□□□□ 0.16
SOX1-201ENST00000330949 X6R8D5 127 aa16.06■□□□□ 0.16
SOX1-201ENST00000330949 LYRM9A8MSI8 78 aa16.05■□□□□ 0.16
SOX1-201ENST00000330949 CYP4F30PQ9H0H9 118 aa16.05■□□□□ 0.16
SOX1-201ENST00000330949 IGLV5-48A0A075B6I7 105 aa16.04■□□□□ 0.16
SOX1-201ENST00000330949 ETDCA0A1B0GVM5 59 aa16.04■□□□□ 0.16
SOX1-201ENST00000330949 KPRPQ5T749 579 aaPredicted RBP16.04■□□□□ 0.16
SOX1-201ENST00000330949 DEFB135Q30KP9 77 aa16.02■□□□□ 0.15
SOX1-201ENST00000330949 LELP1Q5T871 98 aa16■□□□□ 0.15
SOX1-201ENST00000330949 HTN3P15516 51 aa16■□□□□ 0.15
SOX1-201ENST00000330949 CAMK2N2Q96S95 79 aa15.99■□□□□ 0.15
SOX1-201ENST00000330949 EGFEM1PQ0D2K5 195 aa15.99■□□□□ 0.15
SOX1-201ENST00000330949 Q8N377 158 aa15.98■□□□□ 0.15
SOX1-201ENST00000330949 DEFB105AQ8NG35 78 aa15.98■□□□□ 0.15
SOX1-201ENST00000330949 TEP1Q99973 2627 aaKnown RBP15.97■□□□□ 0.15
SOX1-201ENST00000330949 IGLV2-33A0A075B6J2 118 aaPredicted RBP15.97■□□□□ 0.15
SOX1-201ENST00000330949 PSCAO43653 123 aa15.96■□□□□ 0.15
SOX1-201ENST00000330949 NDUFB1O75438 58 aa15.95■□□□□ 0.14
SOX1-201ENST00000330949 J3QKU1 62 aa15.94■□□□□ 0.14
SOX1-201ENST00000330949 CD164Q04900 197 aa15.94■□□□□ 0.14
SOX1-201ENST00000330949 A0A1W2PNM2 257 aa15.93■□□□□ 0.14
SOX1-201ENST00000330949 HIVEP1P15822 2718 aa15.92■□□□□ 0.14
SOX1-201ENST00000330949 PKD1L1Q8TDX9 2849 aa15.91■□□□□ 0.14
SOX1-201ENST00000330949 A8MUN3 132 aa15.9■□□□□ 0.14
SOX1-201ENST00000330949 DSCR10P59022 87 aa15.9■□□□□ 0.14
SOX1-201ENST00000330949 PRR4Q16378 134 aa15.9■□□□□ 0.14
SOX1-201ENST00000330949 NSD1Q96L73 2696 aaPredicted RBP15.89■□□□□ 0.13
SOX1-201ENST00000330949 C1orf137Q5JT78 98 aa15.88■□□□□ 0.13
SOX1-201ENST00000330949 Q8NBF4 154 aa15.88■□□□□ 0.13
SOX1-201ENST00000330949 SYCNQ0VAF6 134 aa15.88■□□□□ 0.13
SOX1-201ENST00000330949 KCNQ1DNQ9H478 68 aa15.88■□□□□ 0.13
SOX1-201ENST00000330949 K7EQZ3 153 aa15.87■□□□□ 0.13
SOX1-201ENST00000330949 ST20-AS1Q8NBB2 130 aa15.86■□□□□ 0.13
SOX1-201ENST00000330949 SPRR4Q96PI1 79 aa15.85■□□□□ 0.13
SOX1-201ENST00000330949 HCG22E2RYF7 251 aa15.84■□□□□ 0.13
SOX1-201ENST00000330949 UBE2BP63146 152 aa15.84■□□□□ 0.13
SOX1-201ENST00000330949 DHRS4-AS1Q9P1J3 65 aa15.84■□□□□ 0.13
SOX1-201ENST00000330949 TNP2Q05952 138 aa15.83■□□□□ 0.12
SOX1-201ENST00000330949 Q5VV11 94 aa15.82■□□□□ 0.12
SOX1-201ENST00000330949 NKAPP1Q8N9T2 125 aa15.81■□□□□ 0.12
SOX1-201ENST00000330949 MAST4O15021 2626 aa15.79■□□□□ 0.12
SOX1-201ENST00000330949 INAFM1C9JVW0 142 aa15.79■□□□□ 0.12
SOX1-201ENST00000330949 MP68P56378 58 aa15.79■□□□□ 0.12
SOX1-201ENST00000330949 B9D2Q9BPU9 175 aa15.79■□□□□ 0.12
SOX1-201ENST00000330949 UBE2AP49459 152 aa15.78■□□□□ 0.12
SOX1-201ENST00000330949 Q6ZRX8 168 aa15.76■□□□□ 0.11
SOX1-201ENST00000330949 LIMD2Q9BT23 127 aa15.75■□□□□ 0.11
SOX1-201ENST00000330949 PRB2P02812 416 aaPredicted RBP15.75■□□□□ 0.11
SOX1-201ENST00000330949 C15orf56Q8N910 161 aa15.75■□□□□ 0.11
SOX1-201ENST00000330949 C7orf33Q8WU49 177 aa15.75■□□□□ 0.11
SOX1-201ENST00000330949 A8MU10 97 aa15.73■□□□□ 0.11
SOX1-201ENST00000330949 KRTAP26-1Q6PEX3 210 aa15.72■□□□□ 0.11
SOX1-201ENST00000330949 CHKB-CPT1BH3BT56 60 aa15.72■□□□□ 0.11
SOX1-201ENST00000330949 MRPL55Q7Z7F7 128 aaKnown RBP15.72■□□□□ 0.11
SOX1-201ENST00000330949 RETNQ9HD89 108 aa15.72■□□□□ 0.11
SOX1-201ENST00000330949 KTN1-AS1Q86SY8 53 aa15.71■□□□□ 0.1
SOX1-201ENST00000330949 SPART-AS1P0CW21 52 aa15.7■□□□□ 0.1
SOX1-201ENST00000330949 SPANXA2-OT1Q8N9U9 137 aa15.7■□□□□ 0.1
SOX1-201ENST00000330949 Q9BRP9 147 aa15.7■□□□□ 0.1
SOX1-201ENST00000330949 ANK2Q01484 3957 aa15.7■□□□□ 0.1
SOX1-201ENST00000330949 Q8N9P0 234 aaPredicted RBP15.69■□□□□ 0.1
SOX1-201ENST00000330949 LINC00588Q9Y4M8 146 aa15.69■□□□□ 0.1
SOX1-201ENST00000330949 SERTAD4-AS1Q5TG53 156 aa15.68■□□□□ 0.1
SOX1-201ENST00000330949 LINC00208Q96KT6 92 aa15.68■□□□□ 0.1
SOX1-201ENST00000330949 Q8NAQ8 132 aa15.67■□□□□ 0.1
SOX1-201ENST00000330949 APOC4P55056 127 aa15.67■□□□□ 0.1
SOX1-201ENST00000330949 C16orf90A8MZG2 172 aa15.66■□□□□ 0.1
SOX1-201ENST00000330949 KRTAP4-16G5E9R7 235 aaPredicted RBP15.65■□□□□ 0.1
SOX1-201ENST00000330949 WFDC10BQ8IUB3 73 aa15.63■□□□□ 0.09
SOX1-201ENST00000330949 WFDC13Q8IUB5 93 aa15.63■□□□□ 0.09
SOX1-201ENST00000330949 TENM3Q9P273 2699 aa15.63■□□□□ 0.09
SOX1-201ENST00000330949 PRR15LQ9BU68 103 aa15.63■□□□□ 0.09
SOX1-201ENST00000330949 H3BPC8 53 aa15.62■□□□□ 0.09
SOX1-201ENST00000330949 STAB1Q9NY15 2570 aa15.61■□□□□ 0.09
SOX1-201ENST00000330949 SPRR1AP35321 89 aa15.6■□□□□ 0.09
SOX1-201ENST00000330949 ATP11AUNQ6ZP68 121 aa15.6■□□□□ 0.09
SOX1-201ENST00000330949 RPL37AP8A6NKH3 93 aa15.6■□□□□ 0.09
SOX1-201ENST00000330949 NOTCH1P46531 2555 aa15.59■□□□□ 0.09
SOX1-201ENST00000330949 SPTSSBQ8NFR3 76 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms