RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 IGKV2D-28P01615 120 aa3.21□□□□□ -1.9
LRIT3-201ENST00000327908 Q5VSD8 79 aa3.21□□□□□ -1.9
LRIT3-201ENST00000327908 LAMTOR3Q9UHA4 124 aa3.21□□□□□ -1.9
LRIT3-201ENST00000327908 TRACP01848 142 aa3.21□□□□□ -1.9
LRIT3-201ENST00000327908 NPC2P61916 151 aa3.21□□□□□ -1.9
LRIT3-201ENST00000327908 SCGB1C2P0DMR2 95 aa3.2□□□□□ -1.9
LRIT3-201ENST00000327908 FAM168BA1KXE4 195 aa3.2□□□□□ -1.9
LRIT3-201ENST00000327908 GAGE10A6NGK3 116 aa3.2□□□□□ -1.9
LRIT3-201ENST00000327908 ATXN8Q156A1 80 aa3.2□□□□□ -1.9
LRIT3-201ENST00000327908 C6orf99Q4VX62 202 aa3.2□□□□□ -1.9
LRIT3-201ENST00000327908 SPAG11AQ6PDA7 123 aa3.2□□□□□ -1.9
LRIT3-201ENST00000327908 SMIM11BQ8TCY0 68 aa3.2□□□□□ -1.9
LRIT3-201ENST00000327908 STARD9Q9P2P6 4700 aa3.2□□□□□ -1.9
LRIT3-201ENST00000327908 hADV29S1A0JD25 119 aa3.2□□□□□ -1.9
LRIT3-201ENST00000327908 SPRR1BP22528 89 aa3.2□□□□□ -1.9
LRIT3-201ENST00000327908 FXYD2P54710 66 aa3.2□□□□□ -1.9
LRIT3-201ENST00000327908 LINC01620Q4KN68 170 aa3.2□□□□□ -1.9
LRIT3-201ENST00000327908 TGP01266 2768 aa3.19□□□□□ -1.9
LRIT3-201ENST00000327908 Q6JHZ5 121 aa3.19□□□□□ -1.9
LRIT3-201ENST00000327908 LINC00575Q6W349 94 aa3.19□□□□□ -1.9
LRIT3-201ENST00000327908 TEX49A0A1B0GTD5 131 aa3.19□□□□□ -1.9
LRIT3-201ENST00000327908 FABP2P12104 132 aa3.19□□□□□ -1.9
LRIT3-201ENST00000327908 KRTAP13-1Q8IUC0 172 aa3.19□□□□□ -1.9
LRIT3-201ENST00000327908 KRTAP4-16G5E9R7 235 aaPredicted RBP3.18□□□□□ -1.9
LRIT3-201ENST00000327908 SSBP3-AS1Q7Z2R9 100 aa3.18□□□□□ -1.9
LRIT3-201ENST00000327908 C9orf118A6NHY6 69 aa3.18□□□□□ -1.9
LRIT3-201ENST00000327908 PANO1I0J062 215 aa3.18□□□□□ -1.9
LRIT3-201ENST00000327908 CRYGAP11844 174 aa3.18□□□□□ -1.9
LRIT3-201ENST00000327908 PDE6GP18545 87 aa3.18□□□□□ -1.9
LRIT3-201ENST00000327908 GTF2H5Q6ZYL4 71 aa3.18□□□□□ -1.9
LRIT3-201ENST00000327908 A0A1B0GW54 56 aa3.18□□□□□ -1.9
LRIT3-201ENST00000327908 LINC00483Q53H64 154 aa3.18□□□□□ -1.9
LRIT3-201ENST00000327908 SMCR5Q8TEV8 140 aa3.18□□□□□ -1.9
LRIT3-201ENST00000327908 ORMDL1Q9P0S3 153 aa3.18□□□□□ -1.9
LRIT3-201ENST00000327908 TENM2Q9NT68 2774 aa3.18□□□□□ -1.9
LRIT3-201ENST00000327908 KRTAP7-1Q8IUC3 87 aa3.17□□□□□ -1.9
LRIT3-201ENST00000327908 TMEM256-PLSCR3K7ERE1 68 aa3.17□□□□□ -1.9
LRIT3-201ENST00000327908 HIGD2AQ9BW72 106 aa3.17□□□□□ -1.9
LRIT3-201ENST00000327908 TSPAN13O95857 204 aa3.17□□□□□ -1.9
LRIT3-201ENST00000327908 CD164Q04900 197 aa3.17□□□□□ -1.9
LRIT3-201ENST00000327908 SPRR4Q96PI1 79 aa3.17□□□□□ -1.9
LRIT3-201ENST00000327908 IGLV5-48A0A075B6I7 105 aa3.16□□□□□ -1.9
LRIT3-201ENST00000327908 RPS29P62273 56 aaKnown RBP3.16□□□□□ -1.9
LRIT3-201ENST00000327908 Q8NBF4 154 aa3.16□□□□□ -1.9
LRIT3-201ENST00000327908 DNAH10Q8IVF4 4471 aa3.16□□□□□ -1.9
LRIT3-201ENST00000327908 H3BT86 120 aa3.16□□□□□ -1.9
LRIT3-201ENST00000327908 UBE2V1Q13404 147 aa3.16□□□□□ -1.9
LRIT3-201ENST00000327908 H7C2G1 150 aa3.16□□□□□ -1.9
LRIT3-201ENST00000327908 BATFQ16520 125 aa3.16□□□□□ -1.9
LRIT3-201ENST00000327908 C4orf48Q5BLP8 95 aa3.16□□□□□ -1.9
LRIT3-201ENST00000327908 KRTAP29-1A8MX34 341 aaPredicted RBP3.15□□□□□ -1.9
LRIT3-201ENST00000327908 JMJD7-PLA2G4BH0Y9G9 81 aa3.15□□□□□ -1.9
LRIT3-201ENST00000327908 LST1O00453 97 aa3.15□□□□□ -1.9
LRIT3-201ENST00000327908 SNHG12Q9BXW3 62 aa3.15□□□□□ -1.9
LRIT3-201ENST00000327908 TRIAP1O43715 76 aa3.15□□□□□ -1.9
LRIT3-201ENST00000327908 LIMD2Q9BT23 127 aa3.15□□□□□ -1.9
LRIT3-201ENST00000327908 FUSP35637 526 aaKnown RBP eCLIP3.14□□□□□ -1.91
LRIT3-201ENST00000327908 Q8NDZ9 215 aa3.14□□□□□ -1.91
LRIT3-201ENST00000327908 A0A1W2PPM0 123 aa3.14□□□□□ -1.91
LRIT3-201ENST00000327908 LINC01600Q96MT4 127 aa3.14□□□□□ -1.91
LRIT3-201ENST00000327908 SS18L2Q9UHA2 77 aa3.14□□□□□ -1.91
LRIT3-201ENST00000327908 RYR2Q92736 4967 aa3.14□□□□□ -1.91
LRIT3-201ENST00000327908 SACSQ9NZJ4 4579 aa3.14□□□□□ -1.91
LRIT3-201ENST00000327908 SMR3BP02814 79 aaPredicted RBP3.14□□□□□ -1.91
LRIT3-201ENST00000327908 PRLHP81277 87 aa3.14□□□□□ -1.91
LRIT3-201ENST00000327908 DNAH2Q9P225 4427 aa3.14□□□□□ -1.91
LRIT3-201ENST00000327908 DNAH11Q96DT5 4516 aa3.13□□□□□ -1.91
LRIT3-201ENST00000327908 IGLV8-61A0A075B6I0 122 aa3.13□□□□□ -1.91
LRIT3-201ENST00000327908 A0A1B0GV90 55 aa3.13□□□□□ -1.91
LRIT3-201ENST00000327908 EIF4EBP3O60516 100 aaPredicted RBP3.13□□□□□ -1.91
LRIT3-201ENST00000327908 H3BUT2 72 aa3.12□□□□□ -1.91
LRIT3-201ENST00000327908 KRTAP10-4P60372 401 aaPredicted RBP3.12□□□□□ -1.91
LRIT3-201ENST00000327908 Q6ZQY7 126 aa3.12□□□□□ -1.91
LRIT3-201ENST00000327908 TYMSOSQ8TAI1 123 aa3.12□□□□□ -1.91
LRIT3-201ENST00000327908 CLEC2BQ92478 149 aa3.12□□□□□ -1.91
LRIT3-201ENST00000327908 TAX1BP3O14907 124 aa3.12□□□□□ -1.91
LRIT3-201ENST00000327908 GAGE2AQ6NT46 116 aa3.12□□□□□ -1.91
LRIT3-201ENST00000327908 Q9BRP9 147 aa3.12□□□□□ -1.91
LRIT3-201ENST00000327908 SPCS1Q9Y6A9 102 aa3.12□□□□□ -1.91
LRIT3-201ENST00000327908 K7ERJ3 54 aa3.12□□□□□ -1.91
LRIT3-201ENST00000327908 TCL1BO95988 128 aa3.12□□□□□ -1.91
LRIT3-201ENST00000327908 J3QL48 77 aa3.11□□□□□ -1.91
LRIT3-201ENST00000327908 SPINK1P00995 79 aa3.11□□□□□ -1.91
LRIT3-201ENST00000327908 Q6Q795 121 aa3.11□□□□□ -1.91
LRIT3-201ENST00000327908 K7EP34 96 aa3.11□□□□□ -1.91
LRIT3-201ENST00000327908 C9orf153Q5TBE3 101 aa3.11□□□□□ -1.91
LRIT3-201ENST00000327908 NDUFV3P56181 108 aaKnown RBP3.11□□□□□ -1.91
LRIT3-201ENST00000327908 BAALC-AS2P0C853 105 aa3.1□□□□□ -1.91
LRIT3-201ENST00000327908 Q5XG85 94 aa3.1□□□□□ -1.91
LRIT3-201ENST00000327908 LINC00304Q8N9R0 145 aa3.1□□□□□ -1.91
LRIT3-201ENST00000327908 DSCR8Q96T75 97 aa3.1□□□□□ -1.91
LRIT3-201ENST00000327908 DYNC1H1Q14204 4646 aaKnown RBP3.1□□□□□ -1.91
LRIT3-201ENST00000327908 LYSTQ99698 3801 aa3.1□□□□□ -1.91
LRIT3-201ENST00000327908 F8W1H4 67 aa3.1□□□□□ -1.91
LRIT3-201ENST00000327908 FP248Q71RG6 208 aaPredicted RBP3.1□□□□□ -1.91
LRIT3-201ENST00000327908 ANKRD29Q8N6D5 301 aa3.1□□□□□ -1.91
LRIT3-201ENST00000327908 CSMD3Q7Z407 3707 aa3.1□□□□□ -1.91
LRIT3-201ENST00000327908 LOC100996750A0A140TA64 210 aa3.09□□□□□ -1.91
LRIT3-201ENST00000327908 RBM3P98179 157 aaKnown RBP3.09□□□□□ -1.91
LRIT3-201ENST00000327908 KRTAP11-1Q8IUC1 163 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms