RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 RPL37AP8A6NKH3 93 aa6.42□□□□□ -1.38
VIPAS39-201ENST00000327028 CIRBP-AS1Q8TBR5 109 aa6.42□□□□□ -1.38
VIPAS39-201ENST00000327028 LRP1BQ9NZR2 4599 aa6.41□□□□□ -1.38
VIPAS39-201ENST00000327028 TRIAP1O43715 76 aa6.41□□□□□ -1.38
VIPAS39-201ENST00000327028 NAA38Q9BRA0 125 aaKnown RBP6.41□□□□□ -1.38
VIPAS39-201ENST00000327028 H3BUT2 72 aa6.41□□□□□ -1.38
VIPAS39-201ENST00000327028 PSMB2P49721 201 aa6.41□□□□□ -1.38
VIPAS39-201ENST00000327028 UBE2BP63146 152 aa6.41□□□□□ -1.38
VIPAS39-201ENST00000327028 ZNF73O43830 326 aaPredicted RBP6.4□□□□□ -1.38
VIPAS39-201ENST00000327028 DIRC1Q969H9 104 aa6.4□□□□□ -1.39
VIPAS39-201ENST00000327028 SCGB1A1P11684 91 aa6.39□□□□□ -1.39
VIPAS39-201ENST00000327028 A0A1W2PPM0 123 aa6.39□□□□□ -1.39
VIPAS39-201ENST00000327028 SPRR1AP35321 89 aa6.39□□□□□ -1.39
VIPAS39-201ENST00000327028 C6orf99Q4VX62 202 aa6.39□□□□□ -1.39
VIPAS39-201ENST00000327028 KRTAP11-1Q8IUC1 163 aa6.39□□□□□ -1.39
VIPAS39-201ENST00000327028 SIGMAR1Q99720 223 aa6.39□□□□□ -1.39
VIPAS39-201ENST00000327028 COX6CP09669 75 aa6.38□□□□□ -1.39
VIPAS39-201ENST00000327028 LYRM7Q5U5X0 104 aa6.38□□□□□ -1.39
VIPAS39-201ENST00000327028 REG3GQ6UW15 175 aa6.38□□□□□ -1.39
VIPAS39-201ENST00000327028 TRBV7-6A0A0J9YX20 115 aa6.38□□□□□ -1.39
VIPAS39-201ENST00000327028 HAMPP81172 84 aa6.38□□□□□ -1.39
VIPAS39-201ENST00000327028 FABP2P12104 132 aa6.37□□□□□ -1.39
VIPAS39-201ENST00000327028 KRTAP4-16G5E9R7 235 aaPredicted RBP6.36□□□□□ -1.39
VIPAS39-201ENST00000327028 SCGB1C2P0DMR2 95 aa6.36□□□□□ -1.39
VIPAS39-201ENST00000327028 SS18L2Q9UHA2 77 aa6.36□□□□□ -1.39
VIPAS39-201ENST00000327028 H0YGX0 51 aa6.36□□□□□ -1.39
VIPAS39-201ENST00000327028 ELOF1P60002 83 aaKnown RBP6.36□□□□□ -1.39
VIPAS39-201ENST00000327028 ETDCA0A1B0GVM5 59 aa6.35□□□□□ -1.39
VIPAS39-201ENST00000327028 COX7BP24311 80 aa6.35□□□□□ -1.39
VIPAS39-201ENST00000327028 XGP55808 180 aa6.35□□□□□ -1.39
VIPAS39-201ENST00000327028 GTF2H5Q6ZYL4 71 aa6.35□□□□□ -1.39
VIPAS39-201ENST00000327028 APOBP04114 4563 aaKnown RBP6.35□□□□□ -1.39
VIPAS39-201ENST00000327028 B5MCH6 92 aa6.34□□□□□ -1.39
VIPAS39-201ENST00000327028 CLEC2BQ92478 149 aa6.34□□□□□ -1.39
VIPAS39-201ENST00000327028 BCE1O60756 84 aa6.34□□□□□ -1.39
VIPAS39-201ENST00000327028 Q6ZRX8 168 aa6.34□□□□□ -1.39
VIPAS39-201ENST00000327028 PSORS1C2Q9UIG4 136 aa6.34□□□□□ -1.39
VIPAS39-201ENST00000327028 LINC00528Q8N1L1 170 aa6.33□□□□□ -1.4
VIPAS39-201ENST00000327028 TRBV20-1A0A075B6N2 111 aa6.33□□□□□ -1.4
VIPAS39-201ENST00000327028 SPCS1Q9Y6A9 102 aa6.33□□□□□ -1.4
VIPAS39-201ENST00000327028 TCL1BO95988 128 aa6.32□□□□□ -1.4
VIPAS39-201ENST00000327028 FAM19A1Q7Z5A9 133 aa6.32□□□□□ -1.4
VIPAS39-201ENST00000327028 FAM218AQ96MZ4 157 aa6.32□□□□□ -1.4
VIPAS39-201ENST00000327028 LST1O00453 97 aa6.32□□□□□ -1.4
VIPAS39-201ENST00000327028 ATXN8Q156A1 80 aa6.32□□□□□ -1.4
VIPAS39-201ENST00000327028 LINC00575Q6W349 94 aa6.32□□□□□ -1.4
VIPAS39-201ENST00000327028 H0Y9J4 135 aa6.31□□□□□ -1.4
VIPAS39-201ENST00000327028 K7EP34 96 aa6.31□□□□□ -1.4
VIPAS39-201ENST00000327028 A0A1B0GX51 115 aa6.31□□□□□ -1.4
VIPAS39-201ENST00000327028 CDK2AP2O75956 126 aa6.3□□□□□ -1.4
VIPAS39-201ENST00000327028 INAFM2P0DMQ5 153 aa6.3□□□□□ -1.4
VIPAS39-201ENST00000327028 PRLHP81277 87 aa6.3□□□□□ -1.4
VIPAS39-201ENST00000327028 C1orf137Q5JT78 98 aa6.3□□□□□ -1.4
VIPAS39-201ENST00000327028 KRTAP13-1Q8IUC0 172 aa6.3□□□□□ -1.4
VIPAS39-201ENST00000327028 DHRS4-AS1Q9P1J3 65 aa6.3□□□□□ -1.4
VIPAS39-201ENST00000327028 SLC25A20O43772 301 aa6.3□□□□□ -1.4
VIPAS39-201ENST00000327028 UBE2AP49459 152 aa6.3□□□□□ -1.4
VIPAS39-201ENST00000327028 Q9BRP9 147 aa6.3□□□□□ -1.4
VIPAS39-201ENST00000327028 TRACP01848 142 aa6.29□□□□□ -1.4
VIPAS39-201ENST00000327028 hADV29S1A0JD25 119 aa6.29□□□□□ -1.4
VIPAS39-201ENST00000327028 SNCGO76070 127 aa6.29□□□□□ -1.4
VIPAS39-201ENST00000327028 SMCR5Q8TEV8 140 aa6.28□□□□□ -1.4
VIPAS39-201ENST00000327028 EPPK1P58107 5090 aaKnown RBP6.28□□□□□ -1.4
VIPAS39-201ENST00000327028 IGLV7-43P04211 117 aa6.28□□□□□ -1.4
VIPAS39-201ENST00000327028 H3BMG7 143 aa6.27□□□□□ -1.41
VIPAS39-201ENST00000327028 SMIM20Q8N5G0 67 aa6.27□□□□□ -1.41
VIPAS39-201ENST00000327028 DNAL4O96015 105 aa6.27□□□□□ -1.41
VIPAS39-201ENST00000327028 SMR3BP02814 79 aaPredicted RBP6.27□□□□□ -1.41
VIPAS39-201ENST00000327028 RPL37AP61513 92 aaKnown RBP6.27□□□□□ -1.41
VIPAS39-201ENST00000327028 MTURNQ8N3F0 131 aa6.27□□□□□ -1.41
VIPAS39-201ENST00000327028 HIGD2AQ9BW72 106 aa6.27□□□□□ -1.41
VIPAS39-201ENST00000327028 ZNF861PO60384 105 aa6.26□□□□□ -1.41
VIPAS39-201ENST00000327028 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.26□□□□□ -1.41
VIPAS39-201ENST00000327028 ERC2-IT1O76042 136 aa6.25□□□□□ -1.41
VIPAS39-201ENST00000327028 Q6ZQY7 126 aa6.25□□□□□ -1.41
VIPAS39-201ENST00000327028 C9JAW5 83 aa6.24□□□□□ -1.41
VIPAS39-201ENST00000327028 J3QR89 54 aa6.24□□□□□ -1.41
VIPAS39-201ENST00000327028 HSPG2P98160 4391 aa6.24□□□□□ -1.41
VIPAS39-201ENST00000327028 ORMDL1Q9P0S3 153 aa6.23□□□□□ -1.41
VIPAS39-201ENST00000327028 VPS13BQ7Z7G8 4022 aa6.23□□□□□ -1.41
VIPAS39-201ENST00000327028 ST20-AS1Q8NBB2 130 aa6.22□□□□□ -1.41
VIPAS39-201ENST00000327028 PRO0461Q9UI25 63 aa6.22□□□□□ -1.41
VIPAS39-201ENST00000327028 RYR1P21817 5038 aa6.22□□□□□ -1.41
VIPAS39-201ENST00000327028 KRTAP10-4P60372 401 aaPredicted RBP6.22□□□□□ -1.41
VIPAS39-201ENST00000327028 IGLV5-48A0A075B6I7 105 aa6.21□□□□□ -1.41
VIPAS39-201ENST00000327028 H3BQ85 93 aa6.21□□□□□ -1.41
VIPAS39-201ENST00000327028 H3BT86 120 aa6.21□□□□□ -1.41
VIPAS39-201ENST00000327028 GHRHP01286 108 aa6.21□□□□□ -1.42
VIPAS39-201ENST00000327028 LINC01547P58512 204 aaPredicted RBP6.21□□□□□ -1.42
VIPAS39-201ENST00000327028 PPDPFLQ8WWR9 84 aa6.21□□□□□ -1.42
VIPAS39-201ENST00000327028 ANAPC13Q9BS18 74 aa6.21□□□□□ -1.42
VIPAS39-201ENST00000327028 ZNF706Q9Y5V0 76 aaPredicted RBP6.21□□□□□ -1.42
VIPAS39-201ENST00000327028 FAT1Q14517 4588 aa6.21□□□□□ -1.42
VIPAS39-201ENST00000327028 FAM229AH3BQW9 127 aa6.2□□□□□ -1.42
VIPAS39-201ENST00000327028 BAALC-AS2P0C853 105 aa6.2□□□□□ -1.42
VIPAS39-201ENST00000327028 SRRM2Q9UQ35 2752 aaKnown RBP6.2□□□□□ -1.42
VIPAS39-201ENST00000327028 PLA2G1BP04054 148 aaKnown RBP6.2□□□□□ -1.42
VIPAS39-201ENST00000327028 ETDBQ3ZM63 59 aa6.2□□□□□ -1.42
VIPAS39-201ENST00000327028 LINC01600Q96MT4 127 aa6.19□□□□□ -1.42
VIPAS39-201ENST00000327028 F8W1H4 67 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms