RNA–Protein interactions for RNA: ENST00000323055.10

PPP3CA-201, Transcript of protein phosphatase 3 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP3CA, Length 4,519 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CA-201ENST00000323055 DEFB116Q30KQ4 102 aa11.42□□□□□ -0.58
PPP3CA-201ENST00000323055 Q9BRP9 147 aa11.42□□□□□ -0.58
PPP3CA-201ENST00000323055 TMEM258P61165 79 aa11.41□□□□□ -0.58
PPP3CA-201ENST00000323055 A0A087WSZ3 146 aa11.41□□□□□ -0.58
PPP3CA-201ENST00000323055 ZNF706Q9Y5V0 76 aaPredicted RBP11.41□□□□□ -0.58
PPP3CA-201ENST00000323055 HIVEP1P15822 2718 aa11.4□□□□□ -0.58
PPP3CA-201ENST00000323055 SMCR5Q8TEV8 140 aa11.39□□□□□ -0.59
PPP3CA-201ENST00000323055 GVQW2A0A096LPI5 108 aaPredicted RBP11.39□□□□□ -0.59
PPP3CA-201ENST00000323055 Q8N9L7 120 aa11.38□□□□□ -0.59
PPP3CA-201ENST00000323055 CHTF8P0CG12 524 aa11.37□□□□□ -0.59
PPP3CA-201ENST00000323055 FAM104AQ969W3 186 aa11.37□□□□□ -0.59
PPP3CA-201ENST00000323055 FAM30AQ9NZY2 134 aa11.37□□□□□ -0.59
PPP3CA-201ENST00000323055 VPREB1P12018 145 aa11.37□□□□□ -0.59
PPP3CA-201ENST00000323055 ELOF1P60002 83 aaKnown RBP11.36□□□□□ -0.59
PPP3CA-201ENST00000323055 FAM168BA1KXE4 195 aa11.36□□□□□ -0.59
PPP3CA-201ENST00000323055 LINC01547P58512 204 aaPredicted RBP11.35□□□□□ -0.59
PPP3CA-201ENST00000323055 PRR4Q16378 134 aa11.35□□□□□ -0.59
PPP3CA-201ENST00000323055 DCHS2Q6V1P9 2916 aa11.35□□□□□ -0.59
PPP3CA-201ENST00000323055 FAM236DA0A1B0GTK5 79 aa11.35□□□□□ -0.59
PPP3CA-201ENST00000323055 FAM236CP0DP71 79 aa11.35□□□□□ -0.59
PPP3CA-201ENST00000323055 NBDYA0A0U1RRE5 68 aa11.35□□□□□ -0.59
PPP3CA-201ENST00000323055 PHF5AQ7RTV0 110 aaKnown RBP11.34□□□□□ -0.59
PPP3CA-201ENST00000323055 CIRBP-AS1Q8TBR5 109 aa11.33□□□□□ -0.6
PPP3CA-201ENST00000323055 C15orf56Q8N910 161 aa11.33□□□□□ -0.6
PPP3CA-201ENST00000323055 FBN2P35556 2912 aa11.33□□□□□ -0.6
PPP3CA-201ENST00000323055 IGLV6-57P01721 117 aa11.32□□□□□ -0.6
PPP3CA-201ENST00000323055 SERTAD4-AS1Q5TG53 156 aa11.32□□□□□ -0.6
PPP3CA-201ENST00000323055 ST20-AS1Q8NBB2 130 aa11.32□□□□□ -0.6
PPP3CA-201ENST00000323055 TRBV7-7A0A0K0K1E9 115 aa11.31□□□□□ -0.6
PPP3CA-201ENST00000323055 Q6ZRX8 168 aa11.3□□□□□ -0.6
PPP3CA-201ENST00000323055 C5orf47Q569G3 176 aa11.29□□□□□ -0.6
PPP3CA-201ENST00000323055 TRAV7A0A075B6U4 112 aa11.28□□□□□ -0.6
PPP3CA-201ENST00000323055 TM2D3Q9BRN9 247 aa11.27□□□□□ -0.6
PPP3CA-201ENST00000323055 CHKB-CPT1BH3BT56 60 aa11.27□□□□□ -0.61
PPP3CA-201ENST00000323055 TRBV7-6A0A0J9YX20 115 aa11.26□□□□□ -0.61
PPP3CA-201ENST00000323055 CASC10Q5T4H9 136 aa11.26□□□□□ -0.61
PPP3CA-201ENST00000323055 C16orf90A8MZG2 172 aa11.26□□□□□ -0.61
PPP3CA-201ENST00000323055 Q6ZQT0 140 aa11.26□□□□□ -0.61
PPP3CA-201ENST00000323055 ZFHX4Q86UP3 3567 aa11.26□□□□□ -0.61
PPP3CA-201ENST00000323055 MPLKIPQ8TAP9 179 aa11.24□□□□□ -0.61
PPP3CA-201ENST00000323055 NIPBLQ6KC79 2804 aaeCLIP11.23□□□□□ -0.61
PPP3CA-201ENST00000323055 IGHV6-1A0A0B4J1U7 121 aa11.22□□□□□ -0.61
PPP3CA-201ENST00000323055 C9orf129Q5T035 196 aaKnown RBP11.21□□□□□ -0.61
PPP3CA-201ENST00000323055 EPM2AB3EWF7 344 aa11.21□□□□□ -0.62
PPP3CA-201ENST00000323055 LINC00208Q96KT6 92 aa11.21□□□□□ -0.62
PPP3CA-201ENST00000323055 RTL8CO15255 209 aa11.2□□□□□ -0.62
PPP3CA-201ENST00000323055 NDUFC1O43677 76 aa11.19□□□□□ -0.62
PPP3CA-201ENST00000323055 LINC00528Q8N1L1 170 aa11.19□□□□□ -0.62
PPP3CA-201ENST00000323055 LINC00476Q8WZB0 136 aa11.19□□□□□ -0.62
PPP3CA-201ENST00000323055 CXCL6P80162 114 aa11.18□□□□□ -0.62
PPP3CA-201ENST00000323055 CASC2Q6XLA1 102 aa11.18□□□□□ -0.62
PPP3CA-201ENST00000323055 KCNQ1DNQ9H478 68 aa11.17□□□□□ -0.62
PPP3CA-201ENST00000323055 LOC110117498A0A087WWA1 95 aa11.16□□□□□ -0.62
PPP3CA-201ENST00000323055 IGLV1-50A0A075B6I6 118 aa11.16□□□□□ -0.62
PPP3CA-201ENST00000323055 Q8NBF4 154 aa11.16□□□□□ -0.62
PPP3CA-201ENST00000323055 WIPF1O43516 503 aa11.16□□□□□ -0.62
PPP3CA-201ENST00000323055 MOBPQ13875 183 aa11.15□□□□□ -0.62
PPP3CA-201ENST00000323055 KMT2BQ9UMN6 2715 aaPredicted RBP11.14□□□□□ -0.63
PPP3CA-201ENST00000323055 MXRA5Q9NR99 2828 aa11.13□□□□□ -0.63
PPP3CA-201ENST00000323055 TMEM254Q8TBM7 123 aa11.13□□□□□ -0.63
PPP3CA-201ENST00000323055 HCG22E2RYF7 251 aa11.11□□□□□ -0.63
PPP3CA-201ENST00000323055 STAB2Q8WWQ8 2551 aa11.11□□□□□ -0.63
PPP3CA-201ENST00000323055 SMIM29Q86T20 159 aa11.11□□□□□ -0.63
PPP3CA-201ENST00000323055 A0A0G2JQZ4 141 aa11.08□□□□□ -0.64
PPP3CA-201ENST00000323055 A0A1W2PNN7 141 aa11.08□□□□□ -0.64
PPP3CA-201ENST00000323055 WWC2-AS2Q96NR7 200 aa11.08□□□□□ -0.64
PPP3CA-201ENST00000323055 APLNQ9ULZ1 77 aa11.07□□□□□ -0.64
PPP3CA-201ENST00000323055 BRK1Q8WUW1 75 aa11.07□□□□□ -0.64
PPP3CA-201ENST00000323055 RETNLBQ9BQ08 111 aa11.07□□□□□ -0.64
PPP3CA-201ENST00000323055 Q8N377 158 aa11.06□□□□□ -0.64
PPP3CA-201ENST00000323055 BCE1O60756 84 aa11.06□□□□□ -0.64
PPP3CA-201ENST00000323055 PCOTHQ58A44 107 aa11.05□□□□□ -0.64
PPP3CA-201ENST00000323055 C9orf163Q8N9P6 203 aa11.05□□□□□ -0.64
PPP3CA-201ENST00000323055 ATP5EP56381 51 aaPredicted RBP11.04□□□□□ -0.64
PPP3CA-201ENST00000323055 TLX1NBP0CAT3 122 aa11.03□□□□□ -0.64
PPP3CA-201ENST00000323055 RPL37AP61513 92 aaKnown RBP11.03□□□□□ -0.64
PPP3CA-201ENST00000323055 H0Y9P7 68 aa11.02□□□□□ -0.64
PPP3CA-201ENST00000323055 ERC2-IT1O76042 136 aa11.02□□□□□ -0.65
PPP3CA-201ENST00000323055 A0A087WTM6 91 aa11.01□□□□□ -0.65
PPP3CA-201ENST00000323055 Q8NDZ9 215 aa10.99□□□□□ -0.65
PPP3CA-201ENST00000323055 TENM4Q6N022 2769 aa10.98□□□□□ -0.65
PPP3CA-201ENST00000323055 SPACA4Q8TDM5 124 aa10.98□□□□□ -0.65
PPP3CA-201ENST00000323055 A0A1B0GW54 56 aa10.97□□□□□ -0.65
PPP3CA-201ENST00000323055 CRYGAP11844 174 aa10.97□□□□□ -0.65
PPP3CA-201ENST00000323055 TRBV7-4A0A0J9YYF1 115 aa10.97□□□□□ -0.65
PPP3CA-201ENST00000323055 IGFL1Q6UW32 110 aa10.96□□□□□ -0.66
PPP3CA-201ENST00000323055 PLA2G2DQ9UNK4 145 aa10.95□□□□□ -0.66
PPP3CA-201ENST00000323055 SERP1Q9Y6X1 66 aa10.94□□□□□ -0.66
PPP3CA-201ENST00000323055 K7EQZ3 153 aa10.94□□□□□ -0.66
PPP3CA-201ENST00000323055 SMIM26A0A096LP01 95 aa10.94□□□□□ -0.66
PPP3CA-201ENST00000323055 ANAPC11Q9NYG5 84 aa10.93□□□□□ -0.66
PPP3CA-201ENST00000323055 CNBPP62633 177 aaKnown RBP10.93□□□□□ -0.66
PPP3CA-201ENST00000323055 hDV103S1A0JD37 113 aa10.92□□□□□ -0.66
PPP3CA-201ENST00000323055 C1orf64Q8NEQ6 169 aa10.92□□□□□ -0.66
PPP3CA-201ENST00000323055 SPTSSBQ8NFR3 76 aa10.9□□□□□ -0.66
PPP3CA-201ENST00000323055 SMG1Q96Q15 3661 aaKnown RBP10.89□□□□□ -0.67
PPP3CA-201ENST00000323055 SEC61GP60059 68 aa10.88□□□□□ -0.67
PPP3CA-201ENST00000323055 A0A1W2PNM2 257 aa10.87□□□□□ -0.67
PPP3CA-201ENST00000323055 LIMD2Q9BT23 127 aa10.87□□□□□ -0.67
PPP3CA-201ENST00000323055 A0A0U1RQV1 116 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms