RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 PLAC8L1A1L4L8 177 aa10.42□□□□□ -0.74
VARS2-201ENST00000321897 ATP5EP56381 51 aaPredicted RBP10.42□□□□□ -0.74
VARS2-201ENST00000321897 FAM104AQ969W3 186 aa10.42□□□□□ -0.74
VARS2-201ENST00000321897 H0Y9J4 135 aa10.41□□□□□ -0.74
VARS2-201ENST00000321897 COX17Q14061 63 aa10.41□□□□□ -0.74
VARS2-201ENST00000321897 CDK2AP2O75956 126 aa10.41□□□□□ -0.74
VARS2-201ENST00000321897 CSNK1G2-AS1Q8NCQ2 148 aa10.41□□□□□ -0.74
VARS2-201ENST00000321897 C19orf73Q9NVV2 129 aa10.41□□□□□ -0.74
VARS2-201ENST00000321897 CHKB-CPT1BH3BT56 60 aa10.4□□□□□ -0.74
VARS2-201ENST00000321897 Q6ZQT0 140 aa10.4□□□□□ -0.74
VARS2-201ENST00000321897 ESRGQ1W209 222 aa10.4□□□□□ -0.75
VARS2-201ENST00000321897 PMAIP1Q13794 54 aa10.39□□□□□ -0.75
VARS2-201ENST00000321897 KMT2BQ9UMN6 2715 aaPredicted RBP10.39□□□□□ -0.75
VARS2-201ENST00000321897 MRPL55Q7Z7F7 128 aaKnown RBP10.38□□□□□ -0.75
VARS2-201ENST00000321897 M0R378 163 aa10.37□□□□□ -0.75
VARS2-201ENST00000321897 LINC00208Q96KT6 92 aa10.37□□□□□ -0.75
VARS2-201ENST00000321897 UBE2AP49459 152 aa10.36□□□□□ -0.75
VARS2-201ENST00000321897 H7BZZ5 65 aa10.36□□□□□ -0.75
VARS2-201ENST00000321897 A6NED7 52 aa10.35□□□□□ -0.75
VARS2-201ENST00000321897 SMIM29Q86T20 159 aa10.35□□□□□ -0.75
VARS2-201ENST00000321897 SEC61GP60059 68 aa10.35□□□□□ -0.75
VARS2-201ENST00000321897 C6orf48Q9UBA6 75 aa10.34□□□□□ -0.75
VARS2-201ENST00000321897 C1orf137Q5JT78 98 aa10.33□□□□□ -0.76
VARS2-201ENST00000321897 STAB2Q8WWQ8 2551 aa10.33□□□□□ -0.76
VARS2-201ENST00000321897 KRTAP1-1Q07627 177 aa10.33□□□□□ -0.76
VARS2-201ENST00000321897 Q8NAQ8 132 aa10.33□□□□□ -0.76
VARS2-201ENST00000321897 CXCL6P80162 114 aa10.32□□□□□ -0.76
VARS2-201ENST00000321897 OXTP01178 125 aa10.3□□□□□ -0.76
VARS2-201ENST00000321897 PRR15LQ9BU68 103 aa10.29□□□□□ -0.76
VARS2-201ENST00000321897 KRTAP24-1Q3LI83 254 aa10.29□□□□□ -0.76
VARS2-201ENST00000321897 EGFEM1PQ0D2K5 195 aa10.28□□□□□ -0.76
VARS2-201ENST00000321897 LINC01600Q96MT4 127 aa10.28□□□□□ -0.76
VARS2-201ENST00000321897 FBN1P35555 2871 aaKnown RBP10.28□□□□□ -0.76
VARS2-201ENST00000321897 IGKV4-1P06312 121 aa10.27□□□□□ -0.77
VARS2-201ENST00000321897 NDUFB1O75438 58 aa10.26□□□□□ -0.77
VARS2-201ENST00000321897 IL17DQ8TAD2 202 aa10.26□□□□□ -0.77
VARS2-201ENST00000321897 PDZD2O15018 2839 aa10.26□□□□□ -0.77
VARS2-201ENST00000321897 PRLHP81277 87 aa10.26□□□□□ -0.77
VARS2-201ENST00000321897 KIAA0087Q14695 138 aa10.25□□□□□ -0.77
VARS2-201ENST00000321897 VWFP04275 2813 aa10.25□□□□□ -0.77
VARS2-201ENST00000321897 Q5XG85 94 aa10.23□□□□□ -0.77
VARS2-201ENST00000321897 C22orf24Q9Y442 160 aa10.23□□□□□ -0.77
VARS2-201ENST00000321897 A0A087WSZ3 146 aa10.23□□□□□ -0.77
VARS2-201ENST00000321897 KLKP1Q107X0 134 aa10.23□□□□□ -0.77
VARS2-201ENST00000321897 PCOTHQ58A44 107 aa10.23□□□□□ -0.77
VARS2-201ENST00000321897 BSNQ9UPA5 3926 aa10.22□□□□□ -0.77
VARS2-201ENST00000321897 ZFHX3Q15911 3703 aa10.22□□□□□ -0.77
VARS2-201ENST00000321897 TENM1Q9UKZ4 2725 aa10.22□□□□□ -0.77
VARS2-201ENST00000321897 NBPF19A0A087WUL8 3843 aa10.22□□□□□ -0.77
VARS2-201ENST00000321897 LOC110117498A0A087WWA1 95 aa10.22□□□□□ -0.77
VARS2-201ENST00000321897 FAM168BA1KXE4 195 aa10.2□□□□□ -0.78
VARS2-201ENST00000321897 C7orf33Q8WU49 177 aa10.19□□□□□ -0.78
VARS2-201ENST00000321897 DHRS4-AS1Q9P1J3 65 aa10.19□□□□□ -0.78
VARS2-201ENST00000321897 IGLV9-49A0A0B4J1Y8 123 aa10.18□□□□□ -0.78
VARS2-201ENST00000321897 KRTAP10-11P60412 298 aa10.18□□□□□ -0.78
VARS2-201ENST00000321897 Q6ZRP5 223 aa10.18□□□□□ -0.78
VARS2-201ENST00000321897 A0A0G2JQZ4 141 aa10.18□□□□□ -0.78
VARS2-201ENST00000321897 A0A1W2PNN7 141 aa10.18□□□□□ -0.78
VARS2-201ENST00000321897 SPINK6Q6UWN8 80 aa10.18□□□□□ -0.78
VARS2-201ENST00000321897 ST20-AS1Q8NBB2 130 aa10.17□□□□□ -0.78
VARS2-201ENST00000321897 A8MUN3 132 aa10.16□□□□□ -0.78
VARS2-201ENST00000321897 BCE1O60756 84 aa10.15□□□□□ -0.78
VARS2-201ENST00000321897 ELOF1P60002 83 aaKnown RBP10.14□□□□□ -0.79
VARS2-201ENST00000321897 OBSCN-AS1Q96MR7 158 aa10.14□□□□□ -0.79
VARS2-201ENST00000321897 TENM4Q6N022 2769 aa10.13□□□□□ -0.79
VARS2-201ENST00000321897 HCG22E2RYF7 251 aa10.13□□□□□ -0.79
VARS2-201ENST00000321897 LINC00167Q96N53 147 aa10.13□□□□□ -0.79
VARS2-201ENST00000321897 CHTF8P0CG12 524 aa10.13□□□□□ -0.79
VARS2-201ENST00000321897 OTOGQ6ZRI0 2925 aa10.13□□□□□ -0.79
VARS2-201ENST00000321897 H0Y9P7 68 aa10.12□□□□□ -0.79
VARS2-201ENST00000321897 IGLV6-57P01721 117 aa10.12□□□□□ -0.79
VARS2-201ENST00000321897 CASC10Q5T4H9 136 aa10.12□□□□□ -0.79
VARS2-201ENST00000321897 SERTAD4-AS1Q5TG53 156 aa10.12□□□□□ -0.79
VARS2-201ENST00000321897 LINC00588Q9Y4M8 146 aa10.11□□□□□ -0.79
VARS2-201ENST00000321897 FP248Q71RG6 208 aaPredicted RBP10.11□□□□□ -0.79
VARS2-201ENST00000321897 WIPF1O43516 503 aa10.11□□□□□ -0.79
VARS2-201ENST00000321897 CASC2Q6XLA1 102 aa10.1□□□□□ -0.79
VARS2-201ENST00000321897 VPS13CQ709C8 3753 aa10.1□□□□□ -0.79
VARS2-201ENST00000321897 RPL37AP61513 92 aaKnown RBP10.1□□□□□ -0.79
VARS2-201ENST00000321897 B9D2Q9BPU9 175 aa10.1□□□□□ -0.79
VARS2-201ENST00000321897 Q8NDZ9 215 aa10.09□□□□□ -0.79
VARS2-201ENST00000321897 C1orf64Q8NEQ6 169 aa10.09□□□□□ -0.79
VARS2-201ENST00000321897 LINC01556Q5JQF7 62 aa10.09□□□□□ -0.79
VARS2-201ENST00000321897 K7EQZ3 153 aa10.09□□□□□ -0.79
VARS2-201ENST00000321897 REG3GQ6UW15 175 aa10.08□□□□□ -0.8
VARS2-201ENST00000321897 FAM229BQ4G0N7 80 aa10.08□□□□□ -0.8
VARS2-201ENST00000321897 VPREB1P12018 145 aa10.07□□□□□ -0.8
VARS2-201ENST00000321897 LY6G6CO95867 125 aa10.07□□□□□ -0.8
VARS2-201ENST00000321897 TENM3Q9P273 2699 aa10.06□□□□□ -0.8
VARS2-201ENST00000321897 TRBV7-4A0A0J9YYF1 115 aa10.06□□□□□ -0.8
VARS2-201ENST00000321897 LINC00612Q8N6U2 182 aa10.05□□□□□ -0.8
VARS2-201ENST00000321897 C15orf56Q8N910 161 aa10.04□□□□□ -0.8
VARS2-201ENST00000321897 Q8NBF4 154 aa10.03□□□□□ -0.8
VARS2-201ENST00000321897 PRR34Q9NV39 138 aa10.03□□□□□ -0.8
VARS2-201ENST00000321897 SPAG11AQ6PDA7 123 aa10.02□□□□□ -0.81
VARS2-201ENST00000321897 Q9BRP9 147 aa10.02□□□□□ -0.81
VARS2-201ENST00000321897 PHF5AQ7RTV0 110 aaKnown RBP10.02□□□□□ -0.81
VARS2-201ENST00000321897 C14orf177Q52M58 125 aa10.01□□□□□ -0.81
VARS2-201ENST00000321897 LINC00528Q8N1L1 170 aa10.01□□□□□ -0.81
VARS2-201ENST00000321897 TRAV22A0A0B4J277 110 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms