RNA–Protein interactions for RNA: ENST00000320672.8

SSBP2-201, Transcript of single stranded DNA binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP2, Length 8,780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-201ENST00000320672 A0A087WTM6 91 aa5.72□□□□□ -1.49
SSBP2-201ENST00000320672 F8WDY8 70 aa5.72□□□□□ -1.49
SSBP2-201ENST00000320672 PRO0628Q9UI54 55 aa5.72□□□□□ -1.49
SSBP2-201ENST00000320672 IGLV5-48A0A075B6I7 105 aa5.72□□□□□ -1.49
SSBP2-201ENST00000320672 PSORS1C2Q9UIG4 136 aa5.72□□□□□ -1.49
SSBP2-201ENST00000320672 C19orf73Q9NVV2 129 aa5.72□□□□□ -1.49
SSBP2-201ENST00000320672 IGLV5-37A0A075B6J1 123 aa5.72□□□□□ -1.49
SSBP2-201ENST00000320672 ZNF462Q96JM2 2506 aa5.71□□□□□ -1.49
SSBP2-201ENST00000320672 LOC110117498A0A087WWA1 95 aa5.71□□□□□ -1.49
SSBP2-201ENST00000320672 CRIPTQ9P021 101 aa5.71□□□□□ -1.49
SSBP2-201ENST00000320672 CHD9Q3L8U1 2897 aa5.71□□□□□ -1.5
SSBP2-201ENST00000320672 TNP2Q05952 138 aa5.71□□□□□ -1.5
SSBP2-201ENST00000320672 LINC00528Q8N1L1 170 aa5.71□□□□□ -1.5
SSBP2-201ENST00000320672 LINC00304Q8N9R0 145 aa5.7□□□□□ -1.5
SSBP2-201ENST00000320672 PRR15Q8IV56 129 aa5.7□□□□□ -1.5
SSBP2-201ENST00000320672 COL27A1Q8IZC6 1860 aaPredicted RBP5.7□□□□□ -1.5
SSBP2-201ENST00000320672 TP53AIP1Q9HCN2 124 aa5.69□□□□□ -1.5
SSBP2-201ENST00000320672 A0A0C4DFX4 3053 aa5.69□□□□□ -1.5
SSBP2-201ENST00000320672 LRRK2Q5S007 2527 aa5.69□□□□□ -1.5
SSBP2-201ENST00000320672 MYO9AB2RTY4 2548 aa5.68□□□□□ -1.5
SSBP2-201ENST00000320672 USP9XQ93008 2570 aaPredicted RBP5.68□□□□□ -1.5
SSBP2-201ENST00000320672 PLA2G2DQ9UNK4 145 aa5.68□□□□□ -1.5
SSBP2-201ENST00000320672 A0A1W2PNM2 257 aa5.68□□□□□ -1.5
SSBP2-201ENST00000320672 ZFYVE26Q68DK2 2539 aa5.68□□□□□ -1.5
SSBP2-201ENST00000320672 LINC00336Q6ZUF6 198 aa5.67□□□□□ -1.5
SSBP2-201ENST00000320672 H3BNG1 76 aa5.67□□□□□ -1.5
SSBP2-201ENST00000320672 C8orf87E5RJ46 101 aa5.67□□□□□ -1.5
SSBP2-201ENST00000320672 PRR26Q8N8Z3 221 aa5.67□□□□□ -1.5
SSBP2-201ENST00000320672 KCNQ1DNQ9H478 68 aa5.67□□□□□ -1.5
SSBP2-201ENST00000320672 FREM2Q5SZK8 3169 aa5.66□□□□□ -1.5
SSBP2-201ENST00000320672 ZNF861PO60384 105 aa5.66□□□□□ -1.5
SSBP2-201ENST00000320672 A0A096LNT2 108 aa5.66□□□□□ -1.5
SSBP2-201ENST00000320672 MIR22HGQ0VDD5 57 aa5.65□□□□□ -1.5
SSBP2-201ENST00000320672 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.65□□□□□ -1.51
SSBP2-201ENST00000320672 CHD8Q9HCK8 2581 aa5.65□□□□□ -1.51
SSBP2-201ENST00000320672 A0A1B0GVX0 72 aa5.64□□□□□ -1.51
SSBP2-201ENST00000320672 WIPF1O43516 503 aa5.64□□□□□ -1.51
SSBP2-201ENST00000320672 KRTAP1-3Q8IUG1 177 aa5.64□□□□□ -1.51
SSBP2-201ENST00000320672 XIRP2A4UGR9 3374 aa5.64□□□□□ -1.51
SSBP2-201ENST00000320672 IGLV7-43P04211 117 aa5.64□□□□□ -1.51
SSBP2-201ENST00000320672 ACANP16112 2415 aa5.63□□□□□ -1.51
SSBP2-201ENST00000320672 PKD1L2Q7Z442 2459 aa5.63□□□□□ -1.51
SSBP2-201ENST00000320672 LINC00612Q8N6U2 182 aa5.62□□□□□ -1.51
SSBP2-201ENST00000320672 LOC101927531A0A1B0GV80 90 aa5.61□□□□□ -1.51
SSBP2-201ENST00000320672 PRR34Q9NV39 138 aa5.61□□□□□ -1.51
SSBP2-201ENST00000320672 CFAP54Q96N23 3096 aa5.61□□□□□ -1.51
SSBP2-201ENST00000320672 CELSR3Q9NYQ7 3312 aa5.61□□□□□ -1.51
SSBP2-201ENST00000320672 KRTAP1-1Q07627 177 aa5.6□□□□□ -1.51
SSBP2-201ENST00000320672 C9orf163Q8N9P6 203 aa5.6□□□□□ -1.51
SSBP2-201ENST00000320672 USP9YO00507 2555 aaPredicted RBP5.6□□□□□ -1.51
SSBP2-201ENST00000320672 ANKRD11Q6UB99 2663 aaPredicted RBP5.6□□□□□ -1.51
SSBP2-201ENST00000320672 Q8NDZ9 215 aa5.6□□□□□ -1.51
SSBP2-201ENST00000320672 UQCR11O14957 56 aa5.59□□□□□ -1.51
SSBP2-201ENST00000320672 PIEZO1Q92508 2521 aa5.59□□□□□ -1.51
SSBP2-201ENST00000320672 SPRR4Q96PI1 79 aa5.59□□□□□ -1.52
SSBP2-201ENST00000320672 H7BZZ5 65 aa5.58□□□□□ -1.52
SSBP2-201ENST00000320672 MTORP42345 2549 aa5.58□□□□□ -1.52
SSBP2-201ENST00000320672 SPTBN4Q9H254 2564 aa5.58□□□□□ -1.52
SSBP2-201ENST00000320672 M0R2T5 61 aa5.57□□□□□ -1.52
SSBP2-201ENST00000320672 KLK9Q2XQG4 91 aa5.56□□□□□ -1.52
SSBP2-201ENST00000320672 F8P00451 2351 aa5.56□□□□□ -1.52
SSBP2-201ENST00000320672 PRRC2CQ9Y520 2896 aaKnown RBP5.56□□□□□ -1.52
SSBP2-201ENST00000320672 FAM104AQ969W3 186 aa5.56□□□□□ -1.52
SSBP2-201ENST00000320672 PRAC1Q96KF2 57 aa5.56□□□□□ -1.52
SSBP2-201ENST00000320672 LAMA2P24043 3122 aaKnown RBP5.56□□□□□ -1.52
SSBP2-201ENST00000320672 PRUNE2Q8WUY3 3088 aa5.56□□□□□ -1.52
SSBP2-201ENST00000320672 FAM229BQ4G0N7 80 aa5.55□□□□□ -1.52
SSBP2-201ENST00000320672 Q8N9P0 234 aaPredicted RBP5.55□□□□□ -1.52
SSBP2-201ENST00000320672 CYSTM1Q9H1C7 97 aa5.54□□□□□ -1.52
SSBP2-201ENST00000320672 SZT2Q5T011 3432 aa5.54□□□□□ -1.52
SSBP2-201ENST00000320672 H3BPC8 53 aa5.53□□□□□ -1.52
SSBP2-201ENST00000320672 CDH23Q9H251 3354 aa5.53□□□□□ -1.52
SSBP2-201ENST00000320672 FASNP49327 2511 aaKnown RBP5.53□□□□□ -1.52
SSBP2-201ENST00000320672 RPS28P62857 69 aaKnown RBP5.52□□□□□ -1.53
SSBP2-201ENST00000320672 TRIOO75962 3097 aa5.51□□□□□ -1.53
SSBP2-201ENST00000320672 Q6ZSA8 131 aa5.5□□□□□ -1.53
SSBP2-201ENST00000320672 RBM12B-AS1Q9P1G2 102 aa5.5□□□□□ -1.53
SSBP2-201ENST00000320672 IGLV7-46A0A075B6I9 117 aa5.5□□□□□ -1.53
SSBP2-201ENST00000320672 CNBPP62633 177 aaKnown RBP5.49□□□□□ -1.53
SSBP2-201ENST00000320672 HRES1P13985 223 aa5.48□□□□□ -1.53
SSBP2-201ENST00000320672 HECTD1Q9ULT8 2610 aa5.47□□□□□ -1.53
SSBP2-201ENST00000320672 CD164Q04900 197 aa5.47□□□□□ -1.53
SSBP2-201ENST00000320672 CAMK2N1Q7Z7J9 78 aa5.46□□□□□ -1.53
SSBP2-201ENST00000320672 TLX1NBP0CAT3 122 aa5.46□□□□□ -1.54
SSBP2-201ENST00000320672 KLKP1Q107X0 134 aa5.45□□□□□ -1.54
SSBP2-201ENST00000320672 KRTAP1-5Q9BYS1 174 aa5.45□□□□□ -1.54
SSBP2-201ENST00000320672 CDC42SE1Q9NRR8 79 aa5.44□□□□□ -1.54
SSBP2-201ENST00000320672 DNAH14Q0VDD8 3507 aa5.44□□□□□ -1.54
SSBP2-201ENST00000320672 WDFY4Q6ZS81 3184 aa5.44□□□□□ -1.54
SSBP2-201ENST00000320672 VPS13AQ96RL7 3174 aa5.44□□□□□ -1.54
SSBP2-201ENST00000320672 A0A1B0GW54 56 aa5.43□□□□□ -1.54
SSBP2-201ENST00000320672 KRTAP10-2P60368 255 aa5.43□□□□□ -1.54
SSBP2-201ENST00000320672 PANO1I0J062 215 aa5.42□□□□□ -1.54
SSBP2-201ENST00000320672 CYP4F30PQ9H0H9 118 aa5.42□□□□□ -1.54
SSBP2-201ENST00000320672 OCR1Q9BZK8 76 aa5.4□□□□□ -1.55
SSBP2-201ENST00000320672 MGAM2Q2M2H8 2515 aa5.39□□□□□ -1.55
SSBP2-201ENST00000320672 SPINK7P58062 85 aa5.39□□□□□ -1.55
SSBP2-201ENST00000320672 ANKRD17O75179 2603 aaKnown RBP5.39□□□□□ -1.55
SSBP2-201ENST00000320672 KTN1-AS1Q86SY8 53 aa5.39□□□□□ -1.55
SSBP2-201ENST00000320672 VCANP13611 3396 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms