RNA–Protein interactions for RNA: ENST00000320280.8

SCAMP1-201, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 3

Gene SCAMP1, Length 3,766 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-201ENST00000320280 DHRS4-AS1Q9P1J3 65 aa2.06□□□□□ -2.08
SCAMP1-201ENST00000320280 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.06□□□□□ -2.08
SCAMP1-201ENST00000320280 BCE1O60756 84 aa2.06□□□□□ -2.08
SCAMP1-201ENST00000320280 PFN2P35080 140 aa2.06□□□□□ -2.08
SCAMP1-201ENST00000320280 RPL28P46779 137 aaKnown RBP2.06□□□□□ -2.08
SCAMP1-201ENST00000320280 KRTAP10-1P60331 282 aa2.06□□□□□ -2.08
SCAMP1-201ENST00000320280 GAGE2BQ13066 116 aa2.06□□□□□ -2.08
SCAMP1-201ENST00000320280 VAMP3Q15836 100 aa2.06□□□□□ -2.08
SCAMP1-201ENST00000320280 PCP2Q8IVA1 136 aa2.06□□□□□ -2.08
SCAMP1-201ENST00000320280 IGKV2D-30A0A075B6S6 120 aa2.06□□□□□ -2.08
SCAMP1-201ENST00000320280 A0A087WYN8 130 aa2.06□□□□□ -2.08
SCAMP1-201ENST00000320280 FAM229BQ4G0N7 80 aa2.06□□□□□ -2.08
SCAMP1-201ENST00000320280 C9orf116Q5BN46 136 aaPredicted RBP2.06□□□□□ -2.08
SCAMP1-201ENST00000320280 SPINK6Q6UWN8 80 aa2.06□□□□□ -2.08
SCAMP1-201ENST00000320280 C22orf24Q9Y442 160 aa2.06□□□□□ -2.08
SCAMP1-201ENST00000320280 DDTP30046 118 aa2.05□□□□□ -2.08
SCAMP1-201ENST00000320280 REG3GQ6UW15 175 aa2.05□□□□□ -2.08
SCAMP1-201ENST00000320280 ATOH7Q8N100 152 aa2.05□□□□□ -2.08
SCAMP1-201ENST00000320280 TRAV23DV6A0A075B6W5 121 aa2.05□□□□□ -2.08
SCAMP1-201ENST00000320280 LECT2O14960 151 aa2.05□□□□□ -2.08
SCAMP1-201ENST00000320280 PRR3P79522 188 aaKnown RBP2.05□□□□□ -2.08
SCAMP1-201ENST00000320280 SCXQ7RTU7 201 aa2.05□□□□□ -2.08
SCAMP1-201ENST00000320280 MUSTN1Q8IVN3 82 aa2.05□□□□□ -2.08
SCAMP1-201ENST00000320280 DIRC1Q969H9 104 aa2.05□□□□□ -2.08
SCAMP1-201ENST00000320280 KRTAP4-16G5E9R7 235 aaPredicted RBP2.05□□□□□ -2.08
SCAMP1-201ENST00000320280 COX6CP09669 75 aa2.05□□□□□ -2.08
SCAMP1-201ENST00000320280 S100A7L2Q5SY68 101 aa2.05□□□□□ -2.08
SCAMP1-201ENST00000320280 KRTAP13-1Q8IUC0 172 aa2.05□□□□□ -2.08
SCAMP1-201ENST00000320280 CIRBP-AS1Q8TBR5 109 aa2.05□□□□□ -2.08
SCAMP1-201ENST00000320280 RAB37Q96AX2 223 aa2.05□□□□□ -2.08
SCAMP1-201ENST00000320280 HSPG2P98160 4391 aa2.05□□□□□ -2.08
SCAMP1-201ENST00000320280 SPRR1BP22528 89 aa2.04□□□□□ -2.08
SCAMP1-201ENST00000320280 XGP55808 180 aa2.04□□□□□ -2.08
SCAMP1-201ENST00000320280 ELOF1P60002 83 aaKnown RBP2.04□□□□□ -2.08
SCAMP1-201ENST00000320280 ADAMTSL4-AS1Q5T5F5 129 aa2.04□□□□□ -2.08
SCAMP1-201ENST00000320280 SOSTDC1Q6X4U4 206 aa2.04□□□□□ -2.08
SCAMP1-201ENST00000320280 LINC00167Q96N53 147 aa2.04□□□□□ -2.08
SCAMP1-201ENST00000320280 PRO1854Q9UHT4 67 aa2.04□□□□□ -2.08
SCAMP1-201ENST00000320280 OXTP01178 125 aa2.04□□□□□ -2.08
SCAMP1-201ENST00000320280 GAGE2EQ4V326 116 aa2.04□□□□□ -2.08
SCAMP1-201ENST00000320280 LINC01600Q96MT4 127 aa2.04□□□□□ -2.08
SCAMP1-201ENST00000320280 GAGE2DQ9UEU5 116 aa2.04□□□□□ -2.08
SCAMP1-201ENST00000320280 DNAH5Q8TE73 4624 aa2.04□□□□□ -2.08
SCAMP1-201ENST00000320280 IGKV2-28A0A075B6P5 120 aa2.04□□□□□ -2.08
SCAMP1-201ENST00000320280 A0A1W2PNN7 141 aa2.04□□□□□ -2.08
SCAMP1-201ENST00000320280 IGKV2D-28P01615 120 aa2.04□□□□□ -2.08
SCAMP1-201ENST00000320280 RPL13AP40429 203 aaKnown RBP2.04□□□□□ -2.08
SCAMP1-201ENST00000320280 UBE2BP63146 152 aa2.04□□□□□ -2.08
SCAMP1-201ENST00000320280 LINC00483Q53H64 154 aa2.04□□□□□ -2.08
SCAMP1-201ENST00000320280 SERTAD4-AS1Q5TG53 156 aa2.04□□□□□ -2.08
SCAMP1-201ENST00000320280 RYR1P21817 5038 aa2.03□□□□□ -2.08
SCAMP1-201ENST00000320280 TRBV20-1A0A075B6N2 111 aa2.03□□□□□ -2.08
SCAMP1-201ENST00000320280 ETDCA0A1B0GVM5 59 aa2.03□□□□□ -2.08
SCAMP1-201ENST00000320280 A0A1B0GW54 56 aa2.03□□□□□ -2.08
SCAMP1-201ENST00000320280 ZNF73O43830 326 aaPredicted RBP2.03□□□□□ -2.08
SCAMP1-201ENST00000320280 ZNF861PO60384 105 aa2.03□□□□□ -2.08
SCAMP1-201ENST00000320280 IGLV7-43P04211 117 aa2.03□□□□□ -2.08
SCAMP1-201ENST00000320280 RPS29P62273 56 aaKnown RBP2.03□□□□□ -2.08
SCAMP1-201ENST00000320280 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.03□□□□□ -2.08
SCAMP1-201ENST00000320280 Q6ZRX8 168 aa2.03□□□□□ -2.08
SCAMP1-201ENST00000320280 C14orf144Q96I85 54 aa2.03□□□□□ -2.08
SCAMP1-201ENST00000320280 SLC25A20O43772 301 aa2.03□□□□□ -2.08
SCAMP1-201ENST00000320280 TRACP01848 142 aa2.03□□□□□ -2.08
SCAMP1-201ENST00000320280 CFC1BP0CG36 223 aa2.03□□□□□ -2.08
SCAMP1-201ENST00000320280 CFC1P0CG37 223 aa2.03□□□□□ -2.08
SCAMP1-201ENST00000320280 COX7BP24311 80 aa2.03□□□□□ -2.08
SCAMP1-201ENST00000320280 FAM19A5Q7Z5A7 132 aaPredicted RBP2.03□□□□□ -2.08
SCAMP1-201ENST00000320280 KRTAP7-1Q8IUC3 87 aa2.03□□□□□ -2.08
SCAMP1-201ENST00000320280 TENM2Q9NT68 2774 aa2.03□□□□□ -2.08
SCAMP1-201ENST00000320280 IGKV2-24A0A0C4DH68 120 aa2.03□□□□□ -2.09
SCAMP1-201ENST00000320280 TGP01266 2768 aa2.03□□□□□ -2.09
SCAMP1-201ENST00000320280 TRBV10-3A0A0K0K1G6 114 aa2.02□□□□□ -2.09
SCAMP1-201ENST00000320280 XAGE1AQ9HD64 81 aa2.02□□□□□ -2.09
SCAMP1-201ENST00000320280 TNXBP22105 4242 aa2.02□□□□□ -2.09
SCAMP1-201ENST00000320280 IGLV5-48A0A075B6I7 105 aa2.02□□□□□ -2.09
SCAMP1-201ENST00000320280 KRTAP10-4P60372 401 aaPredicted RBP2.02□□□□□ -2.09
SCAMP1-201ENST00000320280 COL5A1-AS1Q5SY13 56 aa2.02□□□□□ -2.09
SCAMP1-201ENST00000320280 PSORS1C2Q9UIG4 136 aa2.02□□□□□ -2.09
SCAMP1-201ENST00000320280 KIAA1109Q2LD37 5005 aa2.02□□□□□ -2.09
SCAMP1-201ENST00000320280 UBE2AP49459 152 aa2.02□□□□□ -2.09
SCAMP1-201ENST00000320280 CD164Q04900 197 aa2.02□□□□□ -2.09
SCAMP1-201ENST00000320280 DPH3Q96FX2 82 aa2.02□□□□□ -2.09
SCAMP1-201ENST00000320280 FAM30AQ9NZY2 134 aa2.02□□□□□ -2.09
SCAMP1-201ENST00000320280 NCR3O14931 201 aa2.01□□□□□ -2.09
SCAMP1-201ENST00000320280 CHTF8P0CG12 524 aa2.01□□□□□ -2.09
SCAMP1-201ENST00000320280 LINC01620Q4KN68 170 aa2.01□□□□□ -2.09
SCAMP1-201ENST00000320280 PHF5AQ7RTV0 110 aaKnown RBP2.01□□□□□ -2.09
SCAMP1-201ENST00000320280 IGLV8-61A0A075B6I0 122 aa2.01□□□□□ -2.09
SCAMP1-201ENST00000320280 FXYD2P54710 66 aa2.01□□□□□ -2.09
SCAMP1-201ENST00000320280 LINC00575Q6W349 94 aa2.01□□□□□ -2.09
SCAMP1-201ENST00000320280 SMIM11BQ8TCY0 68 aa2.01□□□□□ -2.09
SCAMP1-201ENST00000320280 TTTY13Q9BZ97 58 aa2.01□□□□□ -2.09
SCAMP1-201ENST00000320280 PANO1I0J062 215 aa2.01□□□□□ -2.09
SCAMP1-201ENST00000320280 Q6JHZ5 121 aa2.01□□□□□ -2.09
SCAMP1-201ENST00000320280 SPAG11AQ6PDA7 123 aa2.01□□□□□ -2.09
SCAMP1-201ENST00000320280 SSBP3-AS1Q7Z2R9 100 aa2.01□□□□□ -2.09
SCAMP1-201ENST00000320280 Q8N9P0 234 aaPredicted RBP2.01□□□□□ -2.09
SCAMP1-201ENST00000320280 OR13C6PQ8NH95 151 aa2.01□□□□□ -2.09
SCAMP1-201ENST00000320280 PDE6GP18545 87 aa2□□□□□ -2.09
SCAMP1-201ENST00000320280 UBE2V1Q13404 147 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms