RNA–Protein interactions for RNA: ENST00000319172.9

TMEM39A-201, Transcript of transmembrane protein 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM39A, Length 4,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-201ENST00000319172 CCDC179H3BU77 68 aa6.23□□□□□ -1.41
TMEM39A-201ENST00000319172 C4orf26Q17RF5 130 aa6.23□□□□□ -1.41
TMEM39A-201ENST00000319172 ATP5EP56381 51 aaPredicted RBP6.23□□□□□ -1.41
TMEM39A-201ENST00000319172 C1orf137Q5JT78 98 aa6.23□□□□□ -1.41
TMEM39A-201ENST00000319172 FAM236AA0A1B0GUQ0 79 aa6.22□□□□□ -1.41
TMEM39A-201ENST00000319172 FAM236BA0A1B0GV22 79 aa6.22□□□□□ -1.41
TMEM39A-201ENST00000319172 KIAA0087Q14695 138 aa6.22□□□□□ -1.41
TMEM39A-201ENST00000319172 FAM218AQ96MZ4 157 aa6.22□□□□□ -1.41
TMEM39A-201ENST00000319172 ATOX1O00244 68 aa6.22□□□□□ -1.41
TMEM39A-201ENST00000319172 IGKV4-1P06312 121 aa6.22□□□□□ -1.41
TMEM39A-201ENST00000319172 SMCPP49901 116 aaPredicted RBP6.22□□□□□ -1.41
TMEM39A-201ENST00000319172 SDIM1Q6ZPB5 146 aa6.22□□□□□ -1.41
TMEM39A-201ENST00000319172 LINC00643Q86TS7 51 aa6.22□□□□□ -1.41
TMEM39A-201ENST00000319172 BSNQ9UPA5 3926 aa6.21□□□□□ -1.41
TMEM39A-201ENST00000319172 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.21□□□□□ -1.41
TMEM39A-201ENST00000319172 C22orf24Q9Y442 160 aa6.21□□□□□ -1.41
TMEM39A-201ENST00000319172 NBDYA0A0U1RRE5 68 aa6.21□□□□□ -1.42
TMEM39A-201ENST00000319172 PDZD2O15018 2839 aa6.21□□□□□ -1.42
TMEM39A-201ENST00000319172 OTOGQ6ZRI0 2925 aa6.21□□□□□ -1.42
TMEM39A-201ENST00000319172 CIRBP-AS1Q8TBR5 109 aa6.2□□□□□ -1.42
TMEM39A-201ENST00000319172 LINC00575Q6W349 94 aa6.2□□□□□ -1.42
TMEM39A-201ENST00000319172 Q6ZRP5 223 aa6.2□□□□□ -1.42
TMEM39A-201ENST00000319172 REG3GQ6UW15 175 aa6.2□□□□□ -1.42
TMEM39A-201ENST00000319172 GVQW2A0A096LPI5 108 aaPredicted RBP6.19□□□□□ -1.42
TMEM39A-201ENST00000319172 CRYGAP11844 174 aa6.19□□□□□ -1.42
TMEM39A-201ENST00000319172 PRLHP81277 87 aa6.19□□□□□ -1.42
TMEM39A-201ENST00000319172 PRO0461Q9UI25 63 aa6.19□□□□□ -1.42
TMEM39A-201ENST00000319172 SMIM26A0A096LP01 95 aa6.18□□□□□ -1.42
TMEM39A-201ENST00000319172 CASC10Q5T4H9 136 aa6.18□□□□□ -1.42
TMEM39A-201ENST00000319172 C15orf56Q8N910 161 aa6.18□□□□□ -1.42
TMEM39A-201ENST00000319172 LINC00167Q96N53 147 aa6.18□□□□□ -1.42
TMEM39A-201ENST00000319172 CHTF8P0CG12 524 aa6.18□□□□□ -1.42
TMEM39A-201ENST00000319172 DMBT1Q9UGM3 2413 aaPredicted RBP6.17□□□□□ -1.42
TMEM39A-201ENST00000319172 TENM1Q9UKZ4 2725 aa6.17□□□□□ -1.42
TMEM39A-201ENST00000319172 NBPF19A0A087WUL8 3843 aa6.17□□□□□ -1.42
TMEM39A-201ENST00000319172 CHKB-CPT1BH3BT56 60 aa6.17□□□□□ -1.42
TMEM39A-201ENST00000319172 CDIP1Q9H305 208 aa6.17□□□□□ -1.42
TMEM39A-201ENST00000319172 SERP1Q9Y6X1 66 aa6.17□□□□□ -1.42
TMEM39A-201ENST00000319172 UPK3BQ9BT76 320 aa6.17□□□□□ -1.42
TMEM39A-201ENST00000319172 FAM240AA0A1B0GVK7 77 aa6.16□□□□□ -1.42
TMEM39A-201ENST00000319172 FAM168BA1KXE4 195 aa6.16□□□□□ -1.42
TMEM39A-201ENST00000319172 COX7CP15954 63 aa6.16□□□□□ -1.42
TMEM39A-201ENST00000319172 CSMD2Q7Z408 3487 aa6.16□□□□□ -1.42
TMEM39A-201ENST00000319172 WFDC13Q8IUB5 93 aa6.15□□□□□ -1.42
TMEM39A-201ENST00000319172 FAM236DA0A1B0GTK5 79 aa6.15□□□□□ -1.42
TMEM39A-201ENST00000319172 FAM236CP0DP71 79 aa6.15□□□□□ -1.42
TMEM39A-201ENST00000319172 C16orf90A8MZG2 172 aa6.15□□□□□ -1.43
TMEM39A-201ENST00000319172 PRYO14603 147 aa6.14□□□□□ -1.43
TMEM39A-201ENST00000319172 TRBV7-7A0A0K0K1E9 115 aa6.14□□□□□ -1.43
TMEM39A-201ENST00000319172 PHF5AQ7RTV0 110 aaKnown RBP6.13□□□□□ -1.43
TMEM39A-201ENST00000319172 APLNQ9ULZ1 77 aa6.13□□□□□ -1.43
TMEM39A-201ENST00000319172 Q9BRP9 147 aa6.11□□□□□ -1.43
TMEM39A-201ENST00000319172 CASC2Q6XLA1 102 aa6.11□□□□□ -1.43
TMEM39A-201ENST00000319172 SMCR5Q8TEV8 140 aa6.11□□□□□ -1.43
TMEM39A-201ENST00000319172 BRK1Q8WUW1 75 aa6.11□□□□□ -1.43
TMEM39A-201ENST00000319172 CUBNO60494 3623 aa6.11□□□□□ -1.43
TMEM39A-201ENST00000319172 IGLV6-57P01721 117 aa6.1□□□□□ -1.43
TMEM39A-201ENST00000319172 LINC00846Q9NV44 126 aa6.1□□□□□ -1.43
TMEM39A-201ENST00000319172 RTL8CO15255 209 aa6.1□□□□□ -1.43
TMEM39A-201ENST00000319172 VWFP04275 2813 aa6.1□□□□□ -1.43
TMEM39A-201ENST00000319172 ZFHX3Q15911 3703 aa6.1□□□□□ -1.43
TMEM39A-201ENST00000319172 ELOF1P60002 83 aaKnown RBP6.1□□□□□ -1.43
TMEM39A-201ENST00000319172 C9orf129Q5T035 196 aaKnown RBP6.09□□□□□ -1.43
TMEM39A-201ENST00000319172 A0A087WSZ3 146 aa6.09□□□□□ -1.43
TMEM39A-201ENST00000319172 A0A087WVE0 104 aa6.09□□□□□ -1.43
TMEM39A-201ENST00000319172 C20orf197Q8N268 126 aa6.09□□□□□ -1.43
TMEM39A-201ENST00000319172 ST20-AS1Q8NBB2 130 aa6.08□□□□□ -1.44
TMEM39A-201ENST00000319172 FAM229AH3BQW9 127 aa6.08□□□□□ -1.44
TMEM39A-201ENST00000319172 ATP5EP2Q5VTU8 51 aa6.07□□□□□ -1.44
TMEM39A-201ENST00000319172 Q6ZRX8 168 aa6.07□□□□□ -1.44
TMEM39A-201ENST00000319172 DEFB116Q30KQ4 102 aa6.06□□□□□ -1.44
TMEM39A-201ENST00000319172 FBN1P35555 2871 aaKnown RBP6.06□□□□□ -1.44
TMEM39A-201ENST00000319172 NDUFC1O43677 76 aa6.06□□□□□ -1.44
TMEM39A-201ENST00000319172 PRR15Q8IV56 129 aa6.06□□□□□ -1.44
TMEM39A-201ENST00000319172 TRBV7-6A0A0J9YX20 115 aa6.05□□□□□ -1.44
TMEM39A-201ENST00000319172 Q6JHZ5 121 aa6.05□□□□□ -1.44
TMEM39A-201ENST00000319172 IGHV6-1A0A0B4J1U7 121 aa6.04□□□□□ -1.44
TMEM39A-201ENST00000319172 TENM3Q9P273 2699 aa6.04□□□□□ -1.44
TMEM39A-201ENST00000319172 A0A087WTM6 91 aa6.04□□□□□ -1.44
TMEM39A-201ENST00000319172 EPM2AB3EWF7 344 aa6.04□□□□□ -1.44
TMEM39A-201ENST00000319172 Q6ZVQ6 151 aa6.04□□□□□ -1.44
TMEM39A-201ENST00000319172 IGLV1-50A0A075B6I6 118 aa6.03□□□□□ -1.44
TMEM39A-201ENST00000319172 SERP2Q8N6R1 65 aa6.03□□□□□ -1.44
TMEM39A-201ENST00000319172 SPACA4Q8TDM5 124 aa6.03□□□□□ -1.44
TMEM39A-201ENST00000319172 BCE1O60756 84 aa6.03□□□□□ -1.44
TMEM39A-201ENST00000319172 C9orf163Q8N9P6 203 aa6.03□□□□□ -1.44
TMEM39A-201ENST00000319172 KCNQ1DNQ9H478 68 aa6.03□□□□□ -1.44
TMEM39A-201ENST00000319172 LINC00528Q8N1L1 170 aa6.02□□□□□ -1.45
TMEM39A-201ENST00000319172 FAM30AQ9NZY2 134 aa6.02□□□□□ -1.45
TMEM39A-201ENST00000319172 MOBPQ13875 183 aa6.02□□□□□ -1.45
TMEM39A-201ENST00000319172 A0A1W2PNN7 141 aa6.02□□□□□ -1.45
TMEM39A-201ENST00000319172 PRR4Q16378 134 aa6.02□□□□□ -1.45
TMEM39A-201ENST00000319172 Q5XG85 94 aa6.02□□□□□ -1.45
TMEM39A-201ENST00000319172 Q8N9L7 120 aa6.01□□□□□ -1.45
TMEM39A-201ENST00000319172 FLG2Q5D862 2391 aaPredicted RBP6.01□□□□□ -1.45
TMEM39A-201ENST00000319172 Q8NDZ9 215 aa6.01□□□□□ -1.45
TMEM39A-201ENST00000319172 LINC01600Q96MT4 127 aa6.01□□□□□ -1.45
TMEM39A-201ENST00000319172 KRTAP1-5Q9BYS1 174 aa6.01□□□□□ -1.45
TMEM39A-201ENST00000319172 TLX1NBP0CAT3 122 aa6□□□□□ -1.45
TMEM39A-201ENST00000319172 LINC01547P58512 204 aaPredicted RBP6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms