RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 KRTAP24-1Q3LI83 254 aa6.43□□□□□ -1.38
PTPRA-202ENST00000318266 DNHD1Q96M86 4753 aa6.43□□□□□ -1.38
PTPRA-202ENST00000318266 IGKV4-1P06312 121 aa6.43□□□□□ -1.38
PTPRA-202ENST00000318266 FUSP35637 526 aaKnown RBP eCLIP6.42□□□□□ -1.38
PTPRA-202ENST00000318266 FAM30AQ9NZY2 134 aa6.42□□□□□ -1.38
PTPRA-202ENST00000318266 CAMK2N2Q96S95 79 aa6.42□□□□□ -1.38
PTPRA-202ENST00000318266 PRB2P02812 416 aaPredicted RBP6.42□□□□□ -1.38
PTPRA-202ENST00000318266 OCR1Q9BZK8 76 aa6.4□□□□□ -1.38
PTPRA-202ENST00000318266 VPREB1P12018 145 aa6.4□□□□□ -1.39
PTPRA-202ENST00000318266 PKD1L1Q8TDX9 2849 aa6.39□□□□□ -1.39
PTPRA-202ENST00000318266 ATP5EP56381 51 aaPredicted RBP6.39□□□□□ -1.39
PTPRA-202ENST00000318266 SMIM29Q86T20 159 aa6.39□□□□□ -1.39
PTPRA-202ENST00000318266 ATRQ13535 2644 aa6.39□□□□□ -1.39
PTPRA-202ENST00000318266 LYRM9A8MSI8 78 aa6.39□□□□□ -1.39
PTPRA-202ENST00000318266 PRR4Q16378 134 aa6.39□□□□□ -1.39
PTPRA-202ENST00000318266 ESRGQ1W209 222 aa6.39□□□□□ -1.39
PTPRA-202ENST00000318266 Q6ZRU5 148 aa6.39□□□□□ -1.39
PTPRA-202ENST00000318266 H3BQ85 93 aa6.38□□□□□ -1.39
PTPRA-202ENST00000318266 LELP1Q5T871 98 aa6.38□□□□□ -1.39
PTPRA-202ENST00000318266 LINC00528Q8N1L1 170 aa6.38□□□□□ -1.39
PTPRA-202ENST00000318266 C1orf195Q5TG92 126 aa6.37□□□□□ -1.39
PTPRA-202ENST00000318266 M0R378 163 aa6.37□□□□□ -1.39
PTPRA-202ENST00000318266 WFDC10BQ8IUB3 73 aa6.37□□□□□ -1.39
PTPRA-202ENST00000318266 PRR34Q9NV39 138 aa6.37□□□□□ -1.39
PTPRA-202ENST00000318266 Q6ZTC4 211 aa6.36□□□□□ -1.39
PTPRA-202ENST00000318266 ANK3Q12955 4377 aaKnown RBP6.36□□□□□ -1.39
PTPRA-202ENST00000318266 TENM1Q9UKZ4 2725 aa6.36□□□□□ -1.39
PTPRA-202ENST00000318266 GVQW2A0A096LPI5 108 aaPredicted RBP6.35□□□□□ -1.39
PTPRA-202ENST00000318266 KRTAP10-3P60369 221 aa6.35□□□□□ -1.39
PTPRA-202ENST00000318266 Q6ZRP5 223 aa6.35□□□□□ -1.39
PTPRA-202ENST00000318266 RPL37AP8A6NKH3 93 aa6.34□□□□□ -1.39
PTPRA-202ENST00000318266 ERC2-IT1O76042 136 aa6.34□□□□□ -1.39
PTPRA-202ENST00000318266 ANK2Q01484 3957 aa6.34□□□□□ -1.39
PTPRA-202ENST00000318266 KPRPQ5T749 579 aaPredicted RBP6.33□□□□□ -1.4
PTPRA-202ENST00000318266 Q8N377 158 aa6.33□□□□□ -1.4
PTPRA-202ENST00000318266 PSPHP1O15172 72 aa6.33□□□□□ -1.4
PTPRA-202ENST00000318266 SPART-AS1P0CW21 52 aa6.33□□□□□ -1.4
PTPRA-202ENST00000318266 Q8NAQ8 132 aa6.33□□□□□ -1.4
PTPRA-202ENST00000318266 EGFEM1PQ0D2K5 195 aa6.32□□□□□ -1.4
PTPRA-202ENST00000318266 NKAPP1Q8N9T2 125 aa6.32□□□□□ -1.4
PTPRA-202ENST00000318266 A0A0G2JQZ4 141 aa6.31□□□□□ -1.4
PTPRA-202ENST00000318266 A0A1W2PNN7 141 aa6.31□□□□□ -1.4
PTPRA-202ENST00000318266 SERTAD4-AS1Q5TG53 156 aa6.31□□□□□ -1.4
PTPRA-202ENST00000318266 ST20-AS1Q8NBB2 130 aa6.31□□□□□ -1.4
PTPRA-202ENST00000318266 V9GYY9 64 aa6.31□□□□□ -1.4
PTPRA-202ENST00000318266 TRRAPQ9Y4A5 3859 aa6.31□□□□□ -1.4
PTPRA-202ENST00000318266 C15orf56Q8N910 161 aa6.31□□□□□ -1.4
PTPRA-202ENST00000318266 IGKV2D-24A0A075B6R9 120 aa6.31□□□□□ -1.4
PTPRA-202ENST00000318266 A0A1W2PNM2 257 aa6.31□□□□□ -1.4
PTPRA-202ENST00000318266 C1orf64Q8NEQ6 169 aa6.31□□□□□ -1.4
PTPRA-202ENST00000318266 DEFB116Q30KQ4 102 aa6.3□□□□□ -1.4
PTPRA-202ENST00000318266 APOC4P55056 127 aa6.3□□□□□ -1.4
PTPRA-202ENST00000318266 K7EQZ3 153 aa6.29□□□□□ -1.4
PTPRA-202ENST00000318266 C1orf137Q5JT78 98 aa6.29□□□□□ -1.4
PTPRA-202ENST00000318266 C7orf33Q8WU49 177 aa6.29□□□□□ -1.4
PTPRA-202ENST00000318266 hDV103S1A0JD37 113 aa6.29□□□□□ -1.4
PTPRA-202ENST00000318266 FAM168BA1KXE4 195 aa6.28□□□□□ -1.4
PTPRA-202ENST00000318266 RETNQ9HD89 108 aa6.27□□□□□ -1.41
PTPRA-202ENST00000318266 SYCNQ0VAF6 134 aa6.27□□□□□ -1.41
PTPRA-202ENST00000318266 IGLV5-48A0A075B6I7 105 aa6.26□□□□□ -1.41
PTPRA-202ENST00000318266 SEC61GP60059 68 aa6.26□□□□□ -1.41
PTPRA-202ENST00000318266 KRTAP26-1Q6PEX3 210 aa6.26□□□□□ -1.41
PTPRA-202ENST00000318266 Q9BRP9 147 aa6.26□□□□□ -1.41
PTPRA-202ENST00000318266 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.26□□□□□ -1.41
PTPRA-202ENST00000318266 F8WDY8 70 aa6.26□□□□□ -1.41
PTPRA-202ENST00000318266 DSCR10P59022 87 aa6.26□□□□□ -1.41
PTPRA-202ENST00000318266 STAB1Q9NY15 2570 aa6.26□□□□□ -1.41
PTPRA-202ENST00000318266 WFDC13Q8IUB5 93 aa6.25□□□□□ -1.41
PTPRA-202ENST00000318266 ETDCA0A1B0GVM5 59 aa6.25□□□□□ -1.41
PTPRA-202ENST00000318266 KCNQ1DNQ9H478 68 aa6.25□□□□□ -1.41
PTPRA-202ENST00000318266 UBE2BP63146 152 aa6.24□□□□□ -1.41
PTPRA-202ENST00000318266 Q6ZRX8 168 aa6.24□□□□□ -1.41
PTPRA-202ENST00000318266 Q8NBF4 154 aa6.24□□□□□ -1.41
PTPRA-202ENST00000318266 TENM3Q9P273 2699 aa6.24□□□□□ -1.41
PTPRA-202ENST00000318266 COL6A5A8TX70 2615 aa6.23□□□□□ -1.41
PTPRA-202ENST00000318266 TRAV22A0A0B4J277 110 aa6.23□□□□□ -1.41
PTPRA-202ENST00000318266 A8MU10 97 aa6.23□□□□□ -1.41
PTPRA-202ENST00000318266 A8MUN3 132 aa6.22□□□□□ -1.41
PTPRA-202ENST00000318266 DHRS4-AS1Q9P1J3 65 aa6.21□□□□□ -1.42
PTPRA-202ENST00000318266 HCG22E2RYF7 251 aa6.21□□□□□ -1.42
PTPRA-202ENST00000318266 PSCAO43653 123 aa6.21□□□□□ -1.42
PTPRA-202ENST00000318266 ZCCHC13Q8WW36 166 aaKnown RBP6.21□□□□□ -1.42
PTPRA-202ENST00000318266 RPL37AP61513 92 aaKnown RBP6.2□□□□□ -1.42
PTPRA-202ENST00000318266 Q1T7F1 81 aa6.2□□□□□ -1.42
PTPRA-202ENST00000318266 LCE6AA0A183 80 aa6.2□□□□□ -1.42
PTPRA-202ENST00000318266 TNP2Q05952 138 aa6.2□□□□□ -1.42
PTPRA-202ENST00000318266 LINC00208Q96KT6 92 aa6.2□□□□□ -1.42
PTPRA-202ENST00000318266 SRRM2Q9UQ35 2752 aaKnown RBP6.19□□□□□ -1.42
PTPRA-202ENST00000318266 PMAIP1Q13794 54 aa6.19□□□□□ -1.42
PTPRA-202ENST00000318266 CASC10Q5T4H9 136 aa6.19□□□□□ -1.42
PTPRA-202ENST00000318266 NOTCH1P46531 2555 aa6.18□□□□□ -1.42
PTPRA-202ENST00000318266 PRR15Q8IV56 129 aa6.18□□□□□ -1.42
PTPRA-202ENST00000318266 LINC00476Q8WZB0 136 aa6.18□□□□□ -1.42
PTPRA-202ENST00000318266 FBN1P35555 2871 aaKnown RBP6.18□□□□□ -1.42
PTPRA-202ENST00000318266 IGLV1-50A0A075B6I6 118 aa6.18□□□□□ -1.42
PTPRA-202ENST00000318266 A0A087WSZ3 146 aa6.17□□□□□ -1.42
PTPRA-202ENST00000318266 KRTAP4-16G5E9R7 235 aaPredicted RBP6.17□□□□□ -1.42
PTPRA-202ENST00000318266 SPRR4Q96PI1 79 aa6.17□□□□□ -1.42
PTPRA-202ENST00000318266 KRTAP7-1Q8IUC3 87 aa6.16□□□□□ -1.42
PTPRA-202ENST00000318266 MP68P56378 58 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms