RNA–Protein interactions for RNA: ENST00000318023.11

CAPN3-201, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 3,172 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-201ENST00000318023 PRR4Q16378 134 aa6.36□□□□□ -1.39
CAPN3-201ENST00000318023 CD164L2Q6UWJ8 174 aa6.36□□□□□ -1.39
CAPN3-201ENST00000318023 RBM12B-AS1Q9P1G2 102 aa6.36□□□□□ -1.39
CAPN3-201ENST00000318023 hDV103S1A0JD37 113 aa6.35□□□□□ -1.39
CAPN3-201ENST00000318023 ZNF561-AS1K7EIQ3 104 aa6.35□□□□□ -1.39
CAPN3-201ENST00000318023 CASC10Q5T4H9 136 aa6.35□□□□□ -1.39
CAPN3-201ENST00000318023 STARD9Q9P2P6 4700 aa6.35□□□□□ -1.39
CAPN3-201ENST00000318023 LOC110117498A0A087WWA1 95 aa6.34□□□□□ -1.39
CAPN3-201ENST00000318023 TRAV22A0A0B4J277 110 aa6.34□□□□□ -1.39
CAPN3-201ENST00000318023 DEFB130BP0DP73 79 aa6.34□□□□□ -1.39
CAPN3-201ENST00000318023 DEFB130AP0DP74 79 aa6.34□□□□□ -1.39
CAPN3-201ENST00000318023 C1orf64Q8NEQ6 169 aa6.34□□□□□ -1.39
CAPN3-201ENST00000318023 CELA1Q9UNI1 258 aa6.34□□□□□ -1.39
CAPN3-201ENST00000318023 C11orf45Q8TAV5 145 aa6.34□□□□□ -1.4
CAPN3-201ENST00000318023 CMC4P56277 68 aaPredicted RBP6.33□□□□□ -1.4
CAPN3-201ENST00000318023 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.33□□□□□ -1.4
CAPN3-201ENST00000318023 A8MUN3 132 aa6.33□□□□□ -1.4
CAPN3-201ENST00000318023 Q1T7F1 81 aa6.32□□□□□ -1.4
CAPN3-201ENST00000318023 Q6ZQY7 126 aa6.32□□□□□ -1.4
CAPN3-201ENST00000318023 OCR1Q9BZK8 76 aa6.32□□□□□ -1.4
CAPN3-201ENST00000318023 IGLV4-60A0A075B6I1 120 aa6.32□□□□□ -1.4
CAPN3-201ENST00000318023 TRGV1A0A0A0MS02 117 aa6.32□□□□□ -1.4
CAPN3-201ENST00000318023 LY6G6CO95867 125 aa6.32□□□□□ -1.4
CAPN3-201ENST00000318023 X6R8D5 127 aa6.32□□□□□ -1.4
CAPN3-201ENST00000318023 LYSTQ99698 3801 aa6.31□□□□□ -1.4
CAPN3-201ENST00000318023 IGHV3OR16-9A0A0B4J2B5 98 aa6.31□□□□□ -1.4
CAPN3-201ENST00000318023 C4orf48Q5BLP8 95 aa6.31□□□□□ -1.4
CAPN3-201ENST00000318023 LINC00575Q6W349 94 aa6.31□□□□□ -1.4
CAPN3-201ENST00000318023 SPTSSBQ8NFR3 76 aa6.31□□□□□ -1.4
CAPN3-201ENST00000318023 FAM30AQ9NZY2 134 aa6.31□□□□□ -1.4
CAPN3-201ENST00000318023 ERC2-IT1O76042 136 aa6.3□□□□□ -1.4
CAPN3-201ENST00000318023 Q8NDZ9 215 aa6.3□□□□□ -1.4
CAPN3-201ENST00000318023 RYR3Q15413 4870 aa6.3□□□□□ -1.4
CAPN3-201ENST00000318023 LOC100131303A0A0U1RQF7 123 aa6.3□□□□□ -1.4
CAPN3-201ENST00000318023 Q8NAQ8 132 aa6.3□□□□□ -1.4
CAPN3-201ENST00000318023 CSNK1G2-AS1Q8NCQ2 148 aa6.3□□□□□ -1.4
CAPN3-201ENST00000318023 SYCNQ0VAF6 134 aa6.29□□□□□ -1.4
CAPN3-201ENST00000318023 C9orf116Q5BN46 136 aaPredicted RBP6.29□□□□□ -1.4
CAPN3-201ENST00000318023 INSP01308 110 aa6.29□□□□□ -1.4
CAPN3-201ENST00000318023 IGKV4-1P06312 121 aa6.29□□□□□ -1.4
CAPN3-201ENST00000318023 C10orf25Q5T742 122 aa6.29□□□□□ -1.4
CAPN3-201ENST00000318023 KTN1-AS1Q86SY8 53 aa6.29□□□□□ -1.4
CAPN3-201ENST00000318023 NOP10Q9NPE3 64 aaKnown RBP6.29□□□□□ -1.4
CAPN3-201ENST00000318023 CLPSL2Q6UWE3 100 aa6.28□□□□□ -1.4
CAPN3-201ENST00000318023 PLECQ15149 4684 aaKnown RBP6.28□□□□□ -1.4
CAPN3-201ENST00000318023 LINC00612Q8N6U2 182 aa6.27□□□□□ -1.41
CAPN3-201ENST00000318023 DEFB131BA0A096LNP1 70 aa6.26□□□□□ -1.41
CAPN3-201ENST00000318023 C3orf84H3BNL1 204 aa6.26□□□□□ -1.41
CAPN3-201ENST00000318023 LINC00588Q9Y4M8 146 aa6.26□□□□□ -1.41
CAPN3-201ENST00000318023 TRGV2A0A075B6R0 118 aa6.26□□□□□ -1.41
CAPN3-201ENST00000318023 SMIM29Q86T20 159 aa6.26□□□□□ -1.41
CAPN3-201ENST00000318023 M0R378 163 aa6.25□□□□□ -1.41
CAPN3-201ENST00000318023 SPART-AS1P0CW21 52 aa6.25□□□□□ -1.41
CAPN3-201ENST00000318023 A0A096LPF7 62 aa6.24□□□□□ -1.41
CAPN3-201ENST00000318023 C16orf90A8MZG2 172 aa6.24□□□□□ -1.41
CAPN3-201ENST00000318023 CHKB-CPT1BH3BT56 60 aa6.24□□□□□ -1.41
CAPN3-201ENST00000318023 PDE6GP18545 87 aa6.24□□□□□ -1.41
CAPN3-201ENST00000318023 UBE2BP63146 152 aa6.24□□□□□ -1.41
CAPN3-201ENST00000318023 Q5VV11 94 aa6.24□□□□□ -1.41
CAPN3-201ENST00000318023 PSCAO43653 123 aa6.24□□□□□ -1.41
CAPN3-201ENST00000318023 KLK12Q9UKR0 248 aa6.24□□□□□ -1.41
CAPN3-201ENST00000318023 LINC00269Q8N2A0 174 aa6.23□□□□□ -1.41
CAPN3-201ENST00000318023 LINC00959A0A1B0GUT2 108 aa6.22□□□□□ -1.41
CAPN3-201ENST00000318023 HYDINQ4G0P3 5121 aa6.22□□□□□ -1.41
CAPN3-201ENST00000318023 TRGV4A0A0C4DH28 118 aa6.21□□□□□ -1.41
CAPN3-201ENST00000318023 DNAH7Q8WXX0 4024 aa6.21□□□□□ -1.42
CAPN3-201ENST00000318023 SACSQ9NZJ4 4579 aa6.21□□□□□ -1.42
CAPN3-201ENST00000318023 NUPR2A6NF83 97 aa6.21□□□□□ -1.42
CAPN3-201ENST00000318023 HCG22E2RYF7 251 aa6.2□□□□□ -1.42
CAPN3-201ENST00000318023 UBE2DNLQ8IWF7 75 aa6.2□□□□□ -1.42
CAPN3-201ENST00000318023 Q8IZM0 81 aa6.2□□□□□ -1.42
CAPN3-201ENST00000318023 IGLV10-54A0A075B6I4 117 aa6.19□□□□□ -1.42
CAPN3-201ENST00000318023 COX7BP24311 80 aa6.19□□□□□ -1.42
CAPN3-201ENST00000318023 DIRC1Q969H9 104 aa6.19□□□□□ -1.42
CAPN3-201ENST00000318023 KMT2AQ03164 3969 aa6.19□□□□□ -1.42
CAPN3-201ENST00000318023 ZNF73O43830 326 aaPredicted RBP6.18□□□□□ -1.42
CAPN3-201ENST00000318023 PRR15LQ9BU68 103 aa6.18□□□□□ -1.42
CAPN3-201ENST00000318023 TRBV6-8A0A0A6YYG3 113 aa6.18□□□□□ -1.42
CAPN3-201ENST00000318023 LCE6AA0A183 80 aa6.18□□□□□ -1.42
CAPN3-201ENST00000318023 UBE2AP49459 152 aa6.18□□□□□ -1.42
CAPN3-201ENST00000318023 LINC00476Q8WZB0 136 aa6.18□□□□□ -1.42
CAPN3-201ENST00000318023 C16orf74Q96GX8 76 aa6.18□□□□□ -1.42
CAPN3-201ENST00000318023 ST20-AS1Q8NBB2 130 aa6.18□□□□□ -1.42
CAPN3-201ENST00000318023 LCA10Q71F78 164 aa6.17□□□□□ -1.42
CAPN3-201ENST00000318023 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.17□□□□□ -1.42
CAPN3-201ENST00000318023 H3BS24 57 aa6.16□□□□□ -1.42
CAPN3-201ENST00000318023 RYR2Q92736 4967 aa6.15□□□□□ -1.42
CAPN3-201ENST00000318023 A6NED7 52 aa6.15□□□□□ -1.42
CAPN3-201ENST00000318023 ZCCHC13Q8WW36 166 aaKnown RBP6.15□□□□□ -1.42
CAPN3-201ENST00000318023 LYRM9A8MSI8 78 aa6.15□□□□□ -1.43
CAPN3-201ENST00000318023 C8orf87E5RJ46 101 aa6.15□□□□□ -1.43
CAPN3-201ENST00000318023 KIAA0087Q14695 138 aa6.15□□□□□ -1.43
CAPN3-201ENST00000318023 HIGD2BQ4VC39 106 aa6.15□□□□□ -1.43
CAPN3-201ENST00000318023 APLNQ9ULZ1 77 aa6.15□□□□□ -1.43
CAPN3-201ENST00000318023 A6NN06 94 aa6.14□□□□□ -1.43
CAPN3-201ENST00000318023 IGLV6-57P01721 117 aa6.14□□□□□ -1.43
CAPN3-201ENST00000318023 UNQ6190/PRO20217Q6UXQ8 127 aa6.14□□□□□ -1.43
CAPN3-201ENST00000318023 XAGE1AQ9HD64 81 aa6.14□□□□□ -1.43
CAPN3-201ENST00000318023 NDUFS5O43920 106 aa6.13□□□□□ -1.43
CAPN3-201ENST00000318023 COX17Q14061 63 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms