RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 NANOS2P60321 138 aaKnown RBP5.95□□□□□ -1.46
COL6A5-202ENST00000312481 SPRR4Q96PI1 79 aa5.95□□□□□ -1.46
COL6A5-202ENST00000312481 APCP25054 2843 aa5.95□□□□□ -1.46
COL6A5-202ENST00000312481 CNBPP62633 177 aaKnown RBP5.95□□□□□ -1.46
COL6A5-202ENST00000312481 SMCR5Q8TEV8 140 aa5.94□□□□□ -1.46
COL6A5-202ENST00000312481 IGHV6-1A0A0B4J1U7 121 aa5.94□□□□□ -1.46
COL6A5-202ENST00000312481 PRR3P79522 188 aaKnown RBP5.94□□□□□ -1.46
COL6A5-202ENST00000312481 CHD7Q9P2D1 2997 aa5.94□□□□□ -1.46
COL6A5-202ENST00000312481 PRR4Q16378 134 aa5.94□□□□□ -1.46
COL6A5-202ENST00000312481 C7orf65Q6ZTY9 151 aa5.93□□□□□ -1.46
COL6A5-202ENST00000312481 KTN1-AS1Q86SY8 53 aa5.93□□□□□ -1.46
COL6A5-202ENST00000312481 CDSNQ15517 529 aa5.93□□□□□ -1.46
COL6A5-202ENST00000312481 FLNCQ14315 2725 aa5.93□□□□□ -1.46
COL6A5-202ENST00000312481 PSPHP1O15172 72 aa5.93□□□□□ -1.46
COL6A5-202ENST00000312481 TM2D3Q9BRN9 247 aa5.92□□□□□ -1.46
COL6A5-202ENST00000312481 IGSF10Q6WRI0 2623 aa5.92□□□□□ -1.46
COL6A5-202ENST00000312481 CHD9Q3L8U1 2897 aa5.92□□□□□ -1.46
COL6A5-202ENST00000312481 C1orf134Q5TEV5 83 aa5.91□□□□□ -1.46
COL6A5-202ENST00000312481 IGLV1-50A0A075B6I6 118 aa5.91□□□□□ -1.46
COL6A5-202ENST00000312481 LINC00313P59037 77 aa5.91□□□□□ -1.46
COL6A5-202ENST00000312481 DSPP15924 2871 aaKnown RBP5.91□□□□□ -1.46
COL6A5-202ENST00000312481 LY6G6CO95867 125 aa5.91□□□□□ -1.46
COL6A5-202ENST00000312481 ITPR1Q14643 2758 aa5.9□□□□□ -1.46
COL6A5-202ENST00000312481 CIRBP-AS1Q8TBR5 109 aa5.9□□□□□ -1.47
COL6A5-202ENST00000312481 MRPL34Q9BQ48 92 aaKnown RBP5.9□□□□□ -1.47
COL6A5-202ENST00000312481 M0R2N4 97 aa5.89□□□□□ -1.47
COL6A5-202ENST00000312481 FAM104AQ969W3 186 aa5.89□□□□□ -1.47
COL6A5-202ENST00000312481 CEP350Q5VT06 3117 aa5.89□□□□□ -1.47
COL6A5-202ENST00000312481 A0A0C4DFX4 3053 aa5.89□□□□□ -1.47
COL6A5-202ENST00000312481 C15orf56Q8N910 161 aa5.89□□□□□ -1.47
COL6A5-202ENST00000312481 OCR1Q9BZK8 76 aa5.87□□□□□ -1.47
COL6A5-202ENST00000312481 A0A096LNT2 108 aa5.87□□□□□ -1.47
COL6A5-202ENST00000312481 A0A1B0GVX0 72 aa5.87□□□□□ -1.47
COL6A5-202ENST00000312481 CDC42SE1Q9NRR8 79 aa5.87□□□□□ -1.47
COL6A5-202ENST00000312481 EPM2AB3EWF7 344 aa5.86□□□□□ -1.47
COL6A5-202ENST00000312481 C4orf26Q17RF5 130 aa5.86□□□□□ -1.47
COL6A5-202ENST00000312481 NIPBLQ6KC79 2804 aaeCLIP5.86□□□□□ -1.47
COL6A5-202ENST00000312481 LINC00336Q6ZUF6 198 aa5.86□□□□□ -1.47
COL6A5-202ENST00000312481 COA5Q86WW8 74 aa5.85□□□□□ -1.47
COL6A5-202ENST00000312481 NBDYA0A0U1RRE5 68 aa5.85□□□□□ -1.47
COL6A5-202ENST00000312481 PRLHP81277 87 aa5.84□□□□□ -1.47
COL6A5-202ENST00000312481 C19orf73Q9NVV2 129 aa5.84□□□□□ -1.48
COL6A5-202ENST00000312481 Q75L30 129 aa5.83□□□□□ -1.48
COL6A5-202ENST00000312481 IGLV8-61A0A075B6I0 122 aa5.83□□□□□ -1.48
COL6A5-202ENST00000312481 SPINK1P00995 79 aa5.83□□□□□ -1.48
COL6A5-202ENST00000312481 A0A087X002 238 aa5.82□□□□□ -1.48
COL6A5-202ENST00000312481 LCA10Q71F78 164 aa5.82□□□□□ -1.48
COL6A5-202ENST00000312481 Q8N377 158 aa5.82□□□□□ -1.48
COL6A5-202ENST00000312481 ZNF861PO60384 105 aa5.82□□□□□ -1.48
COL6A5-202ENST00000312481 FAM229BQ4G0N7 80 aa5.82□□□□□ -1.48
COL6A5-202ENST00000312481 UTP20O75691 2785 aaKnown RBP5.81□□□□□ -1.48
COL6A5-202ENST00000312481 K7EQZ3 153 aa5.81□□□□□ -1.48
COL6A5-202ENST00000312481 GOLGB1Q14789 3259 aaKnown RBP5.8□□□□□ -1.48
COL6A5-202ENST00000312481 PCOTHQ58A44 107 aa5.8□□□□□ -1.48
COL6A5-202ENST00000312481 ST20-AS1Q8NBB2 130 aa5.8□□□□□ -1.48
COL6A5-202ENST00000312481 C9orf163Q8N9P6 203 aa5.8□□□□□ -1.48
COL6A5-202ENST00000312481 C8orf17Q9NRJ1 99 aa5.8□□□□□ -1.48
COL6A5-202ENST00000312481 IGLV7-46A0A075B6I9 117 aa5.8□□□□□ -1.48
COL6A5-202ENST00000312481 IGFL1Q6UW32 110 aa5.8□□□□□ -1.48
COL6A5-202ENST00000312481 GIG44P09565 113 aaPredicted RBP5.79□□□□□ -1.48
COL6A5-202ENST00000312481 LINC00588Q9Y4M8 146 aa5.79□□□□□ -1.48
COL6A5-202ENST00000312481 C5orf42Q9H799 3197 aa5.79□□□□□ -1.48
COL6A5-202ENST00000312481 OXLD1Q5BKU9 147 aa5.79□□□□□ -1.48
COL6A5-202ENST00000312481 ZNF575Q86XF7 245 aa5.79□□□□□ -1.48
COL6A5-202ENST00000312481 TNP2Q05952 138 aa5.78□□□□□ -1.48
COL6A5-202ENST00000312481 PLA2G1BP04054 148 aaKnown RBP5.78□□□□□ -1.48
COL6A5-202ENST00000312481 MGAQ8IWI9 3026 aa5.77□□□□□ -1.49
COL6A5-202ENST00000312481 LAMA2P24043 3122 aaKnown RBP5.77□□□□□ -1.49
COL6A5-202ENST00000312481 SPRR1BP22528 89 aa5.76□□□□□ -1.49
COL6A5-202ENST00000312481 SPRR1AP35321 89 aa5.76□□□□□ -1.49
COL6A5-202ENST00000312481 SRCAPQ6ZRS2 3230 aa5.76□□□□□ -1.49
COL6A5-202ENST00000312481 MIR22HGQ0VDD5 57 aa5.76□□□□□ -1.49
COL6A5-202ENST00000312481 UBR5O95071 2799 aaPredicted RBP5.76□□□□□ -1.49
COL6A5-202ENST00000312481 CFAP54Q96N23 3096 aa5.74□□□□□ -1.49
COL6A5-202ENST00000312481 IGKV2D-30A0A075B6S6 120 aa5.74□□□□□ -1.49
COL6A5-202ENST00000312481 IGKV2-30P06310 120 aa5.74□□□□□ -1.49
COL6A5-202ENST00000312481 NBEAL2Q6ZNJ1 2754 aa5.74□□□□□ -1.49
COL6A5-202ENST00000312481 SPINT4Q6UDR6 99 aa5.73□□□□□ -1.49
COL6A5-202ENST00000312481 RTL8CO15255 209 aa5.72□□□□□ -1.49
COL6A5-202ENST00000312481 C9orf129Q5T035 196 aaKnown RBP5.72□□□□□ -1.49
COL6A5-202ENST00000312481 VPS13AQ96RL7 3174 aa5.72□□□□□ -1.49
COL6A5-202ENST00000312481 PCNTO95613 3336 aa5.72□□□□□ -1.49
COL6A5-202ENST00000312481 FRYLO94915 3013 aa5.72□□□□□ -1.49
COL6A5-202ENST00000312481 TYMSOSQ8TAI1 123 aa5.71□□□□□ -1.5
COL6A5-202ENST00000312481 KRTAP10-9P60411 292 aa5.71□□□□□ -1.5
COL6A5-202ENST00000312481 EIF4EBP3O60516 100 aaPredicted RBP5.7□□□□□ -1.5
COL6A5-202ENST00000312481 Q9UF83 564 aa5.7□□□□□ -1.5
COL6A5-202ENST00000312481 DEFB116Q30KQ4 102 aa5.7□□□□□ -1.5
COL6A5-202ENST00000312481 CRIPTQ9P021 101 aa5.69□□□□□ -1.5
COL6A5-202ENST00000312481 FRYQ5TBA9 3013 aa5.69□□□□□ -1.5
COL6A5-202ENST00000312481 LINC01558Q9Y6Z2 57 aa5.68□□□□□ -1.5
COL6A5-202ENST00000312481 RBM12B-AS1Q9P1G2 102 aa5.67□□□□□ -1.5
COL6A5-202ENST00000312481 LUZP6Q538Z0 58 aa5.67□□□□□ -1.5
COL6A5-202ENST00000312481 A0A1W2PNM2 257 aa5.66□□□□□ -1.5
COL6A5-202ENST00000312481 TRIOO75962 3097 aa5.66□□□□□ -1.5
COL6A5-202ENST00000312481 SPACA4Q8TDM5 124 aa5.65□□□□□ -1.51
COL6A5-202ENST00000312481 LINC00304Q8N9R0 145 aa5.64□□□□□ -1.51
COL6A5-202ENST00000312481 DSCR10P59022 87 aa5.64□□□□□ -1.51
COL6A5-202ENST00000312481 PHF5AQ7RTV0 110 aaKnown RBP5.64□□□□□ -1.51
COL6A5-202ENST00000312481 IGLV7-43P04211 117 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms