RNA–Protein interactions for RNA: ENST00000311745.9

RBFOX1-201, Transcript of RNA binding fox-1 homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RBFOX1, Length 3,268 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-201ENST00000311745 CDC42SE2Q9NRR3 84 aa6.45□□□□□ -1.38
RBFOX1-201ENST00000311745 FBN1P35555 2871 aaKnown RBP6.45□□□□□ -1.38
RBFOX1-201ENST00000311745 NBEAL2Q6ZNJ1 2754 aa6.45□□□□□ -1.38
RBFOX1-201ENST00000311745 SMIM1B2RUZ4 78 aa6.45□□□□□ -1.38
RBFOX1-201ENST00000311745 CXCL6P80162 114 aa6.45□□□□□ -1.38
RBFOX1-201ENST00000311745 Q8N814 137 aa6.45□□□□□ -1.38
RBFOX1-201ENST00000311745 TRBV6-8A0A0A6YYG3 113 aa6.44□□□□□ -1.38
RBFOX1-201ENST00000311745 PRR3P79522 188 aaKnown RBP6.44□□□□□ -1.38
RBFOX1-201ENST00000311745 TRBV6-4A0A1B0GX49 114 aa6.44□□□□□ -1.38
RBFOX1-201ENST00000311745 CMC4P56277 68 aaPredicted RBP6.44□□□□□ -1.38
RBFOX1-201ENST00000311745 ERC2-IT1O76042 136 aa6.43□□□□□ -1.38
RBFOX1-201ENST00000311745 LINC01554Q52M75 96 aa6.43□□□□□ -1.38
RBFOX1-201ENST00000311745 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.42□□□□□ -1.38
RBFOX1-201ENST00000311745 OCR1Q9BZK8 76 aa6.42□□□□□ -1.38
RBFOX1-201ENST00000311745 IGLV4-60A0A075B6I1 120 aa6.42□□□□□ -1.38
RBFOX1-201ENST00000311745 LINC00313P59037 77 aa6.41□□□□□ -1.38
RBFOX1-201ENST00000311745 ZNF706Q9Y5V0 76 aaPredicted RBP6.41□□□□□ -1.38
RBFOX1-201ENST00000311745 PKD1L1Q8TDX9 2849 aa6.41□□□□□ -1.38
RBFOX1-201ENST00000311745 TEP1Q99973 2627 aaKnown RBP6.4□□□□□ -1.38
RBFOX1-201ENST00000311745 HUWE1Q7Z6Z7 4374 aaKnown RBP6.4□□□□□ -1.39
RBFOX1-201ENST00000311745 HIGD2BQ4VC39 106 aa6.38□□□□□ -1.39
RBFOX1-201ENST00000311745 ADM2Q7Z4H4 148 aa6.38□□□□□ -1.39
RBFOX1-201ENST00000311745 HIVEP2P31629 2446 aa6.38□□□□□ -1.39
RBFOX1-201ENST00000311745 MOBPQ13875 183 aa6.38□□□□□ -1.39
RBFOX1-201ENST00000311745 C6orf99Q4VX62 202 aa6.38□□□□□ -1.39
RBFOX1-201ENST00000311745 TRGV2A0A075B6R0 118 aa6.37□□□□□ -1.39
RBFOX1-201ENST00000311745 C9orf116Q5BN46 136 aaPredicted RBP6.37□□□□□ -1.39
RBFOX1-201ENST00000311745 SMIM29Q86T20 159 aa6.37□□□□□ -1.39
RBFOX1-201ENST00000311745 LYSTQ99698 3801 aa6.37□□□□□ -1.39
RBFOX1-201ENST00000311745 C10orf25Q5T742 122 aa6.37□□□□□ -1.39
RBFOX1-201ENST00000311745 LIMD2Q9BT23 127 aa6.37□□□□□ -1.39
RBFOX1-201ENST00000311745 MP68P56378 58 aa6.37□□□□□ -1.39
RBFOX1-201ENST00000311745 IGHV3OR16-9A0A0B4J2B5 98 aa6.36□□□□□ -1.39
RBFOX1-201ENST00000311745 Q8NAQ8 132 aa6.36□□□□□ -1.39
RBFOX1-201ENST00000311745 Q8N9P0 234 aaPredicted RBP6.36□□□□□ -1.39
RBFOX1-201ENST00000311745 MUC7Q8TAX7 377 aa6.36□□□□□ -1.39
RBFOX1-201ENST00000311745 TRGV4A0A0C4DH28 118 aa6.35□□□□□ -1.39
RBFOX1-201ENST00000311745 IGHV4-28A0A0C4DH34 117 aa6.35□□□□□ -1.39
RBFOX1-201ENST00000311745 C9orf66Q5T8R8 295 aa6.35□□□□□ -1.39
RBFOX1-201ENST00000311745 Q6ZQY7 126 aa6.35□□□□□ -1.39
RBFOX1-201ENST00000311745 IGKV4-1P06312 121 aa6.34□□□□□ -1.39
RBFOX1-201ENST00000311745 DEFB130BP0DP73 79 aa6.34□□□□□ -1.39
RBFOX1-201ENST00000311745 DEFB130AP0DP74 79 aa6.34□□□□□ -1.39
RBFOX1-201ENST00000311745 LOC110117498A0A087WWA1 95 aa6.34□□□□□ -1.39
RBFOX1-201ENST00000311745 C3orf84H3BNL1 204 aa6.33□□□□□ -1.4
RBFOX1-201ENST00000311745 DEFB4AO15263 64 aa6.33□□□□□ -1.4
RBFOX1-201ENST00000311745 CDC42SE1Q9NRR8 79 aa6.33□□□□□ -1.4
RBFOX1-201ENST00000311745 DYNC2H1Q8NCM8 4307 aaKnown RBP6.33□□□□□ -1.4
RBFOX1-201ENST00000311745 DEFB135Q30KP9 77 aa6.33□□□□□ -1.4
RBFOX1-201ENST00000311745 B9D2Q9BPU9 175 aa6.33□□□□□ -1.4
RBFOX1-201ENST00000311745 ATRQ13535 2644 aa6.32□□□□□ -1.4
RBFOX1-201ENST00000311745 GYPEP15421 78 aa6.32□□□□□ -1.4
RBFOX1-201ENST00000311745 KRTAP10-11P60412 298 aa6.32□□□□□ -1.4
RBFOX1-201ENST00000311745 LINC00959A0A1B0GUT2 108 aa6.31□□□□□ -1.4
RBFOX1-201ENST00000311745 LINC00167Q96N53 147 aa6.31□□□□□ -1.4
RBFOX1-201ENST00000311745 KLK12Q9UKR0 248 aa6.31□□□□□ -1.4
RBFOX1-201ENST00000311745 NOTCH2Q04721 2471 aa6.31□□□□□ -1.4
RBFOX1-201ENST00000311745 A0A1B0GUV1 79 aa6.31□□□□□ -1.4
RBFOX1-201ENST00000311745 LINC00208Q96KT6 92 aa6.31□□□□□ -1.4
RBFOX1-201ENST00000311745 CYP4F30PQ9H0H9 118 aa6.31□□□□□ -1.4
RBFOX1-201ENST00000311745 TENM3Q9P273 2699 aa6.3□□□□□ -1.4
RBFOX1-201ENST00000311745 REG3AQ06141 175 aa6.3□□□□□ -1.4
RBFOX1-201ENST00000311745 ST20-AS1Q8NBB2 130 aa6.3□□□□□ -1.4
RBFOX1-201ENST00000311745 RETNLBQ9BQ08 111 aa6.3□□□□□ -1.4
RBFOX1-201ENST00000311745 DNAH9Q9NYC9 4486 aa6.3□□□□□ -1.4
RBFOX1-201ENST00000311745 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.3□□□□□ -1.4
RBFOX1-201ENST00000311745 PDE6GP18545 87 aa6.3□□□□□ -1.4
RBFOX1-201ENST00000311745 PRO0255Q9UI72 69 aa6.3□□□□□ -1.4
RBFOX1-201ENST00000311745 A0A096LPF7 62 aa6.29□□□□□ -1.4
RBFOX1-201ENST00000311745 DNAH7Q8WXX0 4024 aa6.29□□□□□ -1.4
RBFOX1-201ENST00000311745 IGHV4-30-4P0DP06 118 aa6.29□□□□□ -1.4
RBFOX1-201ENST00000311745 KIAA0087Q14695 138 aa6.28□□□□□ -1.4
RBFOX1-201ENST00000311745 LINC00575Q6W349 94 aa6.28□□□□□ -1.4
RBFOX1-201ENST00000311745 Q75L30 129 aa6.28□□□□□ -1.4
RBFOX1-201ENST00000311745 CSMD3Q7Z407 3707 aa6.28□□□□□ -1.4
RBFOX1-201ENST00000311745 DNAH10Q8IVF4 4471 aa6.27□□□□□ -1.41
RBFOX1-201ENST00000311745 DEFB116Q30KQ4 102 aa6.27□□□□□ -1.41
RBFOX1-201ENST00000311745 CASC2Q6XLA1 102 aa6.27□□□□□ -1.41
RBFOX1-201ENST00000311745 Q8NDZ9 215 aa6.27□□□□□ -1.41
RBFOX1-201ENST00000311745 BAHCC1Q9P281 2608 aa6.27□□□□□ -1.41
RBFOX1-201ENST00000311745 LOC101927531A0A1B0GV80 90 aa6.26□□□□□ -1.41
RBFOX1-201ENST00000311745 CYSRT1A8MQ03 144 aa6.26□□□□□ -1.41
RBFOX1-201ENST00000311745 KRTAP24-1Q3LI83 254 aa6.26□□□□□ -1.41
RBFOX1-201ENST00000311745 SPAG11AQ6PDA7 123 aa6.26□□□□□ -1.41
RBFOX1-201ENST00000311745 A0A0A0MQY5 61 aa6.25□□□□□ -1.41
RBFOX1-201ENST00000311745 ETDCA0A1B0GVM5 59 aa6.25□□□□□ -1.41
RBFOX1-201ENST00000311745 EGFEM1PQ0D2K5 195 aa6.25□□□□□ -1.41
RBFOX1-201ENST00000311745 MAST4O15021 2626 aa6.25□□□□□ -1.41
RBFOX1-201ENST00000311745 CLPSL2Q6UWE3 100 aa6.25□□□□□ -1.41
RBFOX1-201ENST00000311745 PLA2G2DQ9UNK4 145 aa6.25□□□□□ -1.41
RBFOX1-201ENST00000311745 TNP2Q05952 138 aa6.24□□□□□ -1.41
RBFOX1-201ENST00000311745 SPINK7P58062 85 aa6.24□□□□□ -1.41
RBFOX1-201ENST00000311745 COL7A1Q02388 2944 aa6.23□□□□□ -1.41
RBFOX1-201ENST00000311745 LINC00476Q8WZB0 136 aa6.23□□□□□ -1.41
RBFOX1-201ENST00000311745 LINC00528Q8N1L1 170 aa6.23□□□□□ -1.41
RBFOX1-201ENST00000311745 NDUFB1O75438 58 aa6.23□□□□□ -1.41
RBFOX1-201ENST00000311745 KRTAP26-1Q6PEX3 210 aa6.23□□□□□ -1.41
RBFOX1-201ENST00000311745 Q8IZM0 81 aa6.23□□□□□ -1.41
RBFOX1-201ENST00000311745 PRR34Q9NV39 138 aa6.23□□□□□ -1.41
RBFOX1-201ENST00000311745 SPAG11BQ08648 103 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms