RNA–Protein interactions for RNA: ENST00000310571.7

PAAF1-201, Transcript of proteasomal ATPase associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PAAF1, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-201ENST00000310571 Q9BRP9 147 aa9.05□□□□□ -0.96
PAAF1-201ENST00000310571 SMCR5Q8TEV8 140 aa9.05□□□□□ -0.96
PAAF1-201ENST00000310571 FAM168BA1KXE4 195 aa9.04□□□□□ -0.96
PAAF1-201ENST00000310571 C16orf90A8MZG2 172 aa9.04□□□□□ -0.96
PAAF1-201ENST00000310571 C3orf22Q8N5N4 141 aa9.03□□□□□ -0.96
PAAF1-201ENST00000310571 SERTAD4-AS1Q5TG53 156 aa9.03□□□□□ -0.96
PAAF1-201ENST00000310571 CHTF8P0CG12 524 aa9.02□□□□□ -0.96
PAAF1-201ENST00000310571 Q6ZVQ6 151 aa9.02□□□□□ -0.97
PAAF1-201ENST00000310571 PHF5AQ7RTV0 110 aaKnown RBP9.02□□□□□ -0.97
PAAF1-201ENST00000310571 SERP2Q8N6R1 65 aa9.02□□□□□ -0.97
PAAF1-201ENST00000310571 Q6ZRX8 168 aa9.02□□□□□ -0.97
PAAF1-201ENST00000310571 SPINK6Q6UWN8 80 aa9.01□□□□□ -0.97
PAAF1-201ENST00000310571 CCDC179H3BU77 68 aa9□□□□□ -0.97
PAAF1-201ENST00000310571 WFDC13Q8IUB5 93 aa9□□□□□ -0.97
PAAF1-201ENST00000310571 NSD1Q96L73 2696 aaPredicted RBP9□□□□□ -0.97
PAAF1-201ENST00000310571 CASC10Q5T4H9 136 aa9□□□□□ -0.97
PAAF1-201ENST00000310571 A0A087WSZ3 146 aa8.98□□□□□ -0.97
PAAF1-201ENST00000310571 C9orf129Q5T035 196 aaKnown RBP8.98□□□□□ -0.97
PAAF1-201ENST00000310571 COX7CP15954 63 aa8.97□□□□□ -0.97
PAAF1-201ENST00000310571 ASH1LQ9NR48 2969 aaKnown RBP8.97□□□□□ -0.97
PAAF1-201ENST00000310571 RTL8CO15255 209 aa8.97□□□□□ -0.97
PAAF1-201ENST00000310571 APLNQ9ULZ1 77 aa8.97□□□□□ -0.97
PAAF1-201ENST00000310571 ST20-AS1Q8NBB2 130 aa8.96□□□□□ -0.97
PAAF1-201ENST00000310571 LINC01547P58512 204 aaPredicted RBP8.96□□□□□ -0.97
PAAF1-201ENST00000310571 WWC2-AS2Q96NR7 200 aa8.96□□□□□ -0.98
PAAF1-201ENST00000310571 TRBV7-7A0A0K0K1E9 115 aa8.96□□□□□ -0.98
PAAF1-201ENST00000310571 NF1P21359 2839 aa8.95□□□□□ -0.98
PAAF1-201ENST00000310571 Q6ZQT0 140 aa8.95□□□□□ -0.98
PAAF1-201ENST00000310571 KCNQ1DNQ9H478 68 aa8.95□□□□□ -0.98
PAAF1-201ENST00000310571 IGLV1-50A0A075B6I6 118 aa8.94□□□□□ -0.98
PAAF1-201ENST00000310571 DEFB116Q30KQ4 102 aa8.93□□□□□ -0.98
PAAF1-201ENST00000310571 LINC00528Q8N1L1 170 aa8.93□□□□□ -0.98
PAAF1-201ENST00000310571 CIRBP-AS1Q8TBR5 109 aa8.93□□□□□ -0.98
PAAF1-201ENST00000310571 SNURFQ9Y675 71 aa8.93□□□□□ -0.98
PAAF1-201ENST00000310571 EPM2AB3EWF7 344 aa8.92□□□□□ -0.98
PAAF1-201ENST00000310571 FBN2P35556 2912 aa8.92□□□□□ -0.98
PAAF1-201ENST00000310571 TLX1NBP0CAT3 122 aa8.92□□□□□ -0.98
PAAF1-201ENST00000310571 LOC110117498A0A087WWA1 95 aa8.92□□□□□ -0.98
PAAF1-201ENST00000310571 IGKV4-1P06312 121 aa8.91□□□□□ -0.98
PAAF1-201ENST00000310571 FAM30AQ9NZY2 134 aa8.91□□□□□ -0.98
PAAF1-201ENST00000310571 Q8N9L7 120 aa8.9□□□□□ -0.98
PAAF1-201ENST00000310571 J3KT08 172 aa8.89□□□□□ -0.99
PAAF1-201ENST00000310571 CXCL6P80162 114 aa8.89□□□□□ -0.99
PAAF1-201ENST00000310571 TRAV7A0A075B6U4 112 aa8.88□□□□□ -0.99
PAAF1-201ENST00000310571 MXRA5Q9NR99 2828 aa8.88□□□□□ -0.99
PAAF1-201ENST00000310571 TMEM258P61165 79 aa8.88□□□□□ -0.99
PAAF1-201ENST00000310571 LINC00476Q8WZB0 136 aa8.88□□□□□ -0.99
PAAF1-201ENST00000310571 C9orf163Q8N9P6 203 aa8.87□□□□□ -0.99
PAAF1-201ENST00000310571 SMG1Q96Q15 3661 aaKnown RBP8.87□□□□□ -0.99
PAAF1-201ENST00000310571 FAM236DA0A1B0GTK5 79 aa8.86□□□□□ -0.99
PAAF1-201ENST00000310571 FAM236CP0DP71 79 aa8.86□□□□□ -0.99
PAAF1-201ENST00000310571 PLA2G2DQ9UNK4 145 aa8.86□□□□□ -0.99
PAAF1-201ENST00000310571 Q8NBF4 154 aa8.86□□□□□ -0.99
PAAF1-201ENST00000310571 BCE1O60756 84 aa8.85□□□□□ -0.99
PAAF1-201ENST00000310571 A0A087WTM6 91 aa8.85□□□□□ -0.99
PAAF1-201ENST00000310571 NBEAL1Q6ZS30 2694 aa8.83□□□□□ -1
PAAF1-201ENST00000310571 A0A1W2PNN7 141 aa8.83□□□□□ -1
PAAF1-201ENST00000310571 CNBPP62633 177 aaKnown RBP8.83□□□□□ -1
PAAF1-201ENST00000310571 MOBPQ13875 183 aa8.83□□□□□ -1
PAAF1-201ENST00000310571 IGHV6-1A0A0B4J1U7 121 aa8.82□□□□□ -1
PAAF1-201ENST00000310571 NIPBLQ6KC79 2804 aaeCLIP8.81□□□□□ -1
PAAF1-201ENST00000310571 NDUFC1O43677 76 aa8.81□□□□□ -1
PAAF1-201ENST00000310571 CASC2Q6XLA1 102 aa8.81□□□□□ -1
PAAF1-201ENST00000310571 Q8N377 158 aa8.81□□□□□ -1
PAAF1-201ENST00000310571 A0A1B0GW54 56 aa8.8□□□□□ -1
PAAF1-201ENST00000310571 Q8NDZ9 215 aa8.79□□□□□ -1
PAAF1-201ENST00000310571 HCG22E2RYF7 251 aa8.78□□□□□ -1
PAAF1-201ENST00000310571 KMT2BQ9UMN6 2715 aaPredicted RBP8.77□□□□□ -1
PAAF1-201ENST00000310571 PRR4Q16378 134 aa8.77□□□□□ -1.01
PAAF1-201ENST00000310571 CHKB-CPT1BH3BT56 60 aa8.76□□□□□ -1.01
PAAF1-201ENST00000310571 ERC2-IT1O76042 136 aa8.76□□□□□ -1.01
PAAF1-201ENST00000310571 LINC00208Q96KT6 92 aa8.76□□□□□ -1.01
PAAF1-201ENST00000310571 TENM4Q6N022 2769 aa8.75□□□□□ -1.01
PAAF1-201ENST00000310571 IGLV5-37A0A075B6J1 123 aa8.75□□□□□ -1.01
PAAF1-201ENST00000310571 TRBV7-4A0A0J9YYF1 115 aa8.75□□□□□ -1.01
PAAF1-201ENST00000310571 KRTAP26-1Q6PEX3 210 aa8.74□□□□□ -1.01
PAAF1-201ENST00000310571 SMIM29Q86T20 159 aa8.74□□□□□ -1.01
PAAF1-201ENST00000310571 LINC01600Q96MT4 127 aa8.74□□□□□ -1.01
PAAF1-201ENST00000310571 TMEM254Q8TBM7 123 aa8.73□□□□□ -1.01
PAAF1-201ENST00000310571 A0A0G2JQZ4 141 aa8.71□□□□□ -1.01
PAAF1-201ENST00000310571 IGFL1Q6UW32 110 aa8.71□□□□□ -1.01
PAAF1-201ENST00000310571 KRTAP1-5Q9BYS1 174 aa8.71□□□□□ -1.01
PAAF1-201ENST00000310571 ATP5EP56381 51 aaPredicted RBP8.71□□□□□ -1.02
PAAF1-201ENST00000310571 OBSCN-AS1Q96MR7 158 aa8.7□□□□□ -1.02
PAAF1-201ENST00000310571 BSNQ9UPA5 3926 aa8.69□□□□□ -1.02
PAAF1-201ENST00000310571 RPL37AP61513 92 aaKnown RBP8.69□□□□□ -1.02
PAAF1-201ENST00000310571 SPENQ96T58 3664 aaKnown RBP8.68□□□□□ -1.02
PAAF1-201ENST00000310571 ZNF861PO60384 105 aa8.68□□□□□ -1.02
PAAF1-201ENST00000310571 CSMD1Q96PZ7 3565 aa8.67□□□□□ -1.02
PAAF1-201ENST00000310571 CELSR1Q9NYQ6 3014 aa8.67□□□□□ -1.02
PAAF1-201ENST00000310571 H0Y9P7 68 aa8.67□□□□□ -1.02
PAAF1-201ENST00000310571 C5orf47Q569G3 176 aa8.67□□□□□ -1.02
PAAF1-201ENST00000310571 MPLKIPQ8TAP9 179 aa8.67□□□□□ -1.02
PAAF1-201ENST00000310571 PSORS1C2Q9UIG4 136 aa8.67□□□□□ -1.02
PAAF1-201ENST00000310571 CRYGAP11844 174 aa8.66□□□□□ -1.02
PAAF1-201ENST00000310571 LIMD2Q9BT23 127 aa8.66□□□□□ -1.02
PAAF1-201ENST00000310571 PDZD2O15018 2839 aa8.66□□□□□ -1.02
PAAF1-201ENST00000310571 TNP2Q05952 138 aa8.65□□□□□ -1.02
PAAF1-201ENST00000310571 SPACA4Q8TDM5 124 aa8.65□□□□□ -1.03
PAAF1-201ENST00000310571 A0A1W2PNM2 257 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms