RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 MIAQ16674 131 aa5.42□□□□□ -1.54
CHD6-201ENST00000309279 CLEC2BQ92478 149 aa5.42□□□□□ -1.54
CHD6-201ENST00000309279 RMI2Q96E14 147 aa5.42□□□□□ -1.54
CHD6-201ENST00000309279 CDC42SE2Q9NRR3 84 aa5.42□□□□□ -1.54
CHD6-201ENST00000309279 HECTD4Q9Y4D8 3996 aa5.42□□□□□ -1.54
CHD6-201ENST00000309279 SERF1AO75920 110 aa5.41□□□□□ -1.54
CHD6-201ENST00000309279 CRPP02741 224 aa5.41□□□□□ -1.54
CHD6-201ENST00000309279 RPL39P62891 51 aaKnown RBP5.41□□□□□ -1.54
CHD6-201ENST00000309279 DNAH11Q96DT5 4516 aa5.41□□□□□ -1.54
CHD6-201ENST00000309279 RPL37AP8A6NKH3 93 aa5.41□□□□□ -1.54
CHD6-201ENST00000309279 EPPK1P58107 5090 aaKnown RBP5.41□□□□□ -1.54
CHD6-201ENST00000309279 PRR4Q16378 134 aa5.4□□□□□ -1.55
CHD6-201ENST00000309279 KRTAP26-1Q6PEX3 210 aa5.4□□□□□ -1.55
CHD6-201ENST00000309279 CLPSL2Q6UWE3 100 aa5.4□□□□□ -1.55
CHD6-201ENST00000309279 C2orf66Q6UXQ4 117 aa5.4□□□□□ -1.55
CHD6-201ENST00000309279 OCR1Q9BZK8 76 aa5.4□□□□□ -1.55
CHD6-201ENST00000309279 IGKV2D-24A0A075B6R9 120 aa5.39□□□□□ -1.55
CHD6-201ENST00000309279 A0A1B0GVY2 172 aa5.39□□□□□ -1.55
CHD6-201ENST00000309279 LRCOL1A6NCL2 159 aa5.39□□□□□ -1.55
CHD6-201ENST00000309279 IGIPA6NJ69 53 aa5.39□□□□□ -1.55
CHD6-201ENST00000309279 TTTY13Q9BZ97 58 aa5.39□□□□□ -1.55
CHD6-201ENST00000309279 LINC01549A6NIU2 74 aa5.38□□□□□ -1.55
CHD6-201ENST00000309279 PSCAO43653 123 aa5.38□□□□□ -1.55
CHD6-201ENST00000309279 Q1T7F1 81 aa5.38□□□□□ -1.55
CHD6-201ENST00000309279 PKHD1P08F94 4074 aa5.38□□□□□ -1.55
CHD6-201ENST00000309279 A0A087WTM6 91 aa5.37□□□□□ -1.55
CHD6-201ENST00000309279 LINC00959A0A1B0GUT2 108 aa5.37□□□□□ -1.55
CHD6-201ENST00000309279 ACYP1P07311 99 aa5.37□□□□□ -1.55
CHD6-201ENST00000309279 CHCHD1Q96BP2 118 aaKnown RBP5.37□□□□□ -1.55
CHD6-201ENST00000309279 DNAH5Q8TE73 4624 aa5.37□□□□□ -1.55
CHD6-201ENST00000309279 IGLV10-54A0A075B6I4 117 aa5.37□□□□□ -1.55
CHD6-201ENST00000309279 IGLV4-3A0A075B6K6 122 aa5.37□□□□□ -1.55
CHD6-201ENST00000309279 A0A096LNJ9 63 aa5.37□□□□□ -1.55
CHD6-201ENST00000309279 S100A7L2Q5SY68 101 aa5.37□□□□□ -1.55
CHD6-201ENST00000309279 TMEM141Q96I45 108 aa5.37□□□□□ -1.55
CHD6-201ENST00000309279 A0A087X002 238 aa5.36□□□□□ -1.55
CHD6-201ENST00000309279 IGKV3OR2-268A0A0C4DH90 116 aa5.36□□□□□ -1.55
CHD6-201ENST00000309279 TSPEAR-AS2P59090 65 aa5.36□□□□□ -1.55
CHD6-201ENST00000309279 ASB16-AS1Q495Z4 193 aa5.36□□□□□ -1.55
CHD6-201ENST00000309279 RNASE13Q5GAN3 156 aaKnown RBP5.36□□□□□ -1.55
CHD6-201ENST00000309279 TMEM170BQ5T4T1 132 aa5.36□□□□□ -1.55
CHD6-201ENST00000309279 LINC00643Q86TS7 51 aa5.36□□□□□ -1.55
CHD6-201ENST00000309279 AMELXQ99217 191 aa5.36□□□□□ -1.55
CHD6-201ENST00000309279 MRPL35Q9NZE8 188 aaKnown RBP5.36□□□□□ -1.55
CHD6-201ENST00000309279 BAGE3Q86Y29 109 aa5.35□□□□□ -1.55
CHD6-201ENST00000309279 SCGB3A1Q96QR1 104 aa5.35□□□□□ -1.55
CHD6-201ENST00000309279 Q8N814 137 aa5.34□□□□□ -1.55
CHD6-201ENST00000309279 XAGE1AQ9HD64 81 aa5.34□□□□□ -1.55
CHD6-201ENST00000309279 H7BZZ5 65 aa5.34□□□□□ -1.56
CHD6-201ENST00000309279 NDUFC1O43677 76 aa5.34□□□□□ -1.56
CHD6-201ENST00000309279 XCL1P47992 114 aa5.34□□□□□ -1.56
CHD6-201ENST00000309279 UBE2D1P51668 147 aa5.34□□□□□ -1.56
CHD6-201ENST00000309279 KRTAP10-2P60368 255 aa5.34□□□□□ -1.56
CHD6-201ENST00000309279 LECT2O14960 151 aa5.33□□□□□ -1.56
CHD6-201ENST00000309279 C14orf177Q52M58 125 aa5.33□□□□□ -1.56
CHD6-201ENST00000309279 DYNC1H1Q14204 4646 aaKnown RBP5.33□□□□□ -1.56
CHD6-201ENST00000309279 LRP1BQ9NZR2 4599 aa5.32□□□□□ -1.56
CHD6-201ENST00000309279 C15orf56Q8N910 161 aa5.32□□□□□ -1.56
CHD6-201ENST00000309279 FAM19A2Q8N3H0 131 aa5.31□□□□□ -1.56
CHD6-201ENST00000309279 BIRC6Q9NR09 4857 aa5.31□□□□□ -1.56
CHD6-201ENST00000309279 TRAV13-2A0A0B4J235 113 aa5.3□□□□□ -1.56
CHD6-201ENST00000309279 COX6A2Q02221 97 aa5.3□□□□□ -1.56
CHD6-201ENST00000309279 SDIM1Q6ZPB5 146 aa5.3□□□□□ -1.56
CHD6-201ENST00000309279 ADM2Q7Z4H4 148 aa5.3□□□□□ -1.56
CHD6-201ENST00000309279 MPLKIPQ8TAP9 179 aa5.3□□□□□ -1.56
CHD6-201ENST00000309279 C8orf17Q9NRJ1 99 aa5.3□□□□□ -1.56
CHD6-201ENST00000309279 GVQW2A0A096LPI5 108 aaPredicted RBP5.3□□□□□ -1.56
CHD6-201ENST00000309279 DHRS4-AS1Q9P1J3 65 aa5.3□□□□□ -1.56
CHD6-201ENST00000309279 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.29□□□□□ -1.56
CHD6-201ENST00000309279 IGLV5-39A0A0G2JS06 123 aa5.29□□□□□ -1.56
CHD6-201ENST00000309279 BCE1O60756 84 aa5.29□□□□□ -1.56
CHD6-201ENST00000309279 LEPROTL1O95214 131 aa5.29□□□□□ -1.56
CHD6-201ENST00000309279 SLPIP03973 132 aa5.29□□□□□ -1.56
CHD6-201ENST00000309279 CNBPP62633 177 aaKnown RBP5.29□□□□□ -1.56
CHD6-201ENST00000309279 SYCNQ0VAF6 134 aa5.29□□□□□ -1.56
CHD6-201ENST00000309279 C7orf33Q8WU49 177 aa5.29□□□□□ -1.56
CHD6-201ENST00000309279 IFI27L1Q96BM0 104 aa5.29□□□□□ -1.56
CHD6-201ENST00000309279 CAMK2N2Q96S95 79 aa5.29□□□□□ -1.56
CHD6-201ENST00000309279 TRAV12-1A0A0B4J245 112 aa5.28□□□□□ -1.56
CHD6-201ENST00000309279 A0A0J9YXY3 114 aa5.28□□□□□ -1.56
CHD6-201ENST00000309279 C16orf90A8MZG2 172 aa5.28□□□□□ -1.56
CHD6-201ENST00000309279 C10orf25Q5T742 122 aa5.28□□□□□ -1.56
CHD6-201ENST00000309279 RETNLBQ9BQ08 111 aa5.28□□□□□ -1.56
CHD6-201ENST00000309279 NDUFA12Q9UI09 145 aa5.28□□□□□ -1.56
CHD6-201ENST00000309279 IGHV3-64A0A075B6Q5 118 aa5.27□□□□□ -1.57
CHD6-201ENST00000309279 KLKP1Q107X0 134 aa5.27□□□□□ -1.57
CHD6-201ENST00000309279 CDKN2A-AS1Q9UH64 79 aa5.27□□□□□ -1.57
CHD6-201ENST00000309279 IGLV4-69A0A075B6H9 119 aa5.26□□□□□ -1.57
CHD6-201ENST00000309279 HIGD2BQ4VC39 106 aa5.26□□□□□ -1.57
CHD6-201ENST00000309279 C9orf163Q8N9P6 203 aa5.26□□□□□ -1.57
CHD6-201ENST00000309279 DNAH8Q96JB1 4490 aa5.26□□□□□ -1.57
CHD6-201ENST00000309279 IGLV8-61A0A075B6I0 122 aa5.26□□□□□ -1.57
CHD6-201ENST00000309279 KRTAP10-1P60331 282 aa5.26□□□□□ -1.57
CHD6-201ENST00000309279 LUZP6Q538Z0 58 aa5.26□□□□□ -1.57
CHD6-201ENST00000309279 KIAA1109Q2LD37 5005 aa5.25□□□□□ -1.57
CHD6-201ENST00000309279 F8VRH5 84 aa5.25□□□□□ -1.57
CHD6-201ENST00000309279 APOBP04114 4563 aaKnown RBP5.25□□□□□ -1.57
CHD6-201ENST00000309279 LOC107984156A0A0G2JMH3 177 aa5.24□□□□□ -1.57
CHD6-201ENST00000309279 C11orf86A6NJI1 115 aa5.24□□□□□ -1.57
CHD6-201ENST00000309279 SMIM1B2RUZ4 78 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 106.8 ms