RNA–Protein interactions for RNA: ENST00000308330.2

LEMD3-201, Transcript of LEM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LEMD3, Length 4,764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-201ENST00000308330 CDH23Q9H251 3354 aa10.46□□□□□ -0.73
LEMD3-201ENST00000308330 VPS13AQ96RL7 3174 aa10.46□□□□□ -0.74
LEMD3-201ENST00000308330 PHF5AQ7RTV0 110 aaKnown RBP10.45□□□□□ -0.74
LEMD3-201ENST00000308330 A0A096LNT2 108 aa10.45□□□□□ -0.74
LEMD3-201ENST00000308330 Q75L30 129 aa10.45□□□□□ -0.74
LEMD3-201ENST00000308330 GCN1Q92616 2671 aaKnown RBP10.45□□□□□ -0.74
LEMD3-201ENST00000308330 OBSCN-AS1Q96MR7 158 aa10.44□□□□□ -0.74
LEMD3-201ENST00000308330 UNQ6190/PRO20217Q6UXQ8 127 aa10.43□□□□□ -0.74
LEMD3-201ENST00000308330 IGLV4-60A0A075B6I1 120 aa10.42□□□□□ -0.74
LEMD3-201ENST00000308330 Q5VV11 94 aa10.42□□□□□ -0.74
LEMD3-201ENST00000308330 CYSRT1A8MQ03 144 aa10.42□□□□□ -0.74
LEMD3-201ENST00000308330 NOTCH1P46531 2555 aa10.42□□□□□ -0.74
LEMD3-201ENST00000308330 A0A087WSZ3 146 aa10.41□□□□□ -0.74
LEMD3-201ENST00000308330 UQCR11O14957 56 aa10.41□□□□□ -0.74
LEMD3-201ENST00000308330 EPM2AB3EWF7 344 aa10.41□□□□□ -0.74
LEMD3-201ENST00000308330 Q6ZSN1 163 aa10.41□□□□□ -0.74
LEMD3-201ENST00000308330 ACYP2P14621 99 aa10.41□□□□□ -0.74
LEMD3-201ENST00000308330 COL27A1Q8IZC6 1860 aaPredicted RBP10.41□□□□□ -0.74
LEMD3-201ENST00000308330 PRR26Q8N8Z3 221 aa10.4□□□□□ -0.74
LEMD3-201ENST00000308330 C1orf134Q5TEV5 83 aa10.39□□□□□ -0.75
LEMD3-201ENST00000308330 OCR1Q9BZK8 76 aa10.38□□□□□ -0.75
LEMD3-201ENST00000308330 SZT2Q5T011 3432 aa10.38□□□□□ -0.75
LEMD3-201ENST00000308330 MIR22HGQ0VDD5 57 aa10.38□□□□□ -0.75
LEMD3-201ENST00000308330 NBEAL1Q6ZS30 2694 aa10.37□□□□□ -0.75
LEMD3-201ENST00000308330 SPANXA2-OT1Q8N9U9 137 aa10.36□□□□□ -0.75
LEMD3-201ENST00000308330 Q8N9P0 234 aaPredicted RBP10.35□□□□□ -0.75
LEMD3-201ENST00000308330 RPL37AP8A6NKH3 93 aa10.35□□□□□ -0.75
LEMD3-201ENST00000308330 SSBP3-AS1Q7Z2R9 100 aa10.35□□□□□ -0.75
LEMD3-201ENST00000308330 IGLV5-52A0A0A0MRZ9 124 aa10.34□□□□□ -0.75
LEMD3-201ENST00000308330 FLNCQ14315 2725 aa10.34□□□□□ -0.75
LEMD3-201ENST00000308330 TP53AIP1Q9HCN2 124 aa10.34□□□□□ -0.75
LEMD3-201ENST00000308330 KRTAP1-3Q8IUG1 177 aa10.34□□□□□ -0.75
LEMD3-201ENST00000308330 KIAA0087Q14695 138 aa10.33□□□□□ -0.76
LEMD3-201ENST00000308330 C6orf48Q9UBA6 75 aa10.33□□□□□ -0.76
LEMD3-201ENST00000308330 UBR5O95071 2799 aaPredicted RBP10.33□□□□□ -0.76
LEMD3-201ENST00000308330 IGHV3OR16-9A0A0B4J2B5 98 aa10.33□□□□□ -0.76
LEMD3-201ENST00000308330 MOBPQ13875 183 aa10.32□□□□□ -0.76
LEMD3-201ENST00000308330 X6R8D5 127 aa10.32□□□□□ -0.76
LEMD3-201ENST00000308330 EGFEM1PQ0D2K5 195 aa10.31□□□□□ -0.76
LEMD3-201ENST00000308330 Q8NBF4 154 aa10.31□□□□□ -0.76
LEMD3-201ENST00000308330 K7EQZ3 153 aa10.3□□□□□ -0.76
LEMD3-201ENST00000308330 A0A1B0GUV1 79 aa10.3□□□□□ -0.76
LEMD3-201ENST00000308330 Q9BRP9 147 aa10.3□□□□□ -0.76
LEMD3-201ENST00000308330 FRYLO94915 3013 aa10.3□□□□□ -0.76
LEMD3-201ENST00000308330 REG3GQ6UW15 175 aa10.29□□□□□ -0.76
LEMD3-201ENST00000308330 ST20-AS1Q8NBB2 130 aa10.27□□□□□ -0.76
LEMD3-201ENST00000308330 COL6A3P12111 3177 aa10.27□□□□□ -0.76
LEMD3-201ENST00000308330 KRTAP1-1Q07627 177 aa10.27□□□□□ -0.77
LEMD3-201ENST00000308330 IGLV8-61A0A075B6I0 122 aa10.26□□□□□ -0.77
LEMD3-201ENST00000308330 IGHV6-1A0A0B4J1U7 121 aa10.26□□□□□ -0.77
LEMD3-201ENST00000308330 SPINK1P00995 79 aa10.25□□□□□ -0.77
LEMD3-201ENST00000308330 LINC00167Q96N53 147 aa10.25□□□□□ -0.77
LEMD3-201ENST00000308330 REV3LO60673 3130 aa10.25□□□□□ -0.77
LEMD3-201ENST00000308330 WWC2-AS2Q96NR7 200 aa10.25□□□□□ -0.77
LEMD3-201ENST00000308330 Q8NAQ8 132 aa10.24□□□□□ -0.77
LEMD3-201ENST00000308330 A0A0A0MQY5 61 aa10.23□□□□□ -0.77
LEMD3-201ENST00000308330 K7EIL1 84 aa10.23□□□□□ -0.77
LEMD3-201ENST00000308330 KLK9Q2XQG4 91 aa10.23□□□□□ -0.77
LEMD3-201ENST00000308330 CSAG1Q6PB30 78 aa10.23□□□□□ -0.77
LEMD3-201ENST00000308330 SPINK6Q6UWN8 80 aa10.22□□□□□ -0.77
LEMD3-201ENST00000308330 KRTAP10-3P60369 221 aa10.21□□□□□ -0.77
LEMD3-201ENST00000308330 LINC01556Q5JQF7 62 aa10.21□□□□□ -0.77
LEMD3-201ENST00000308330 LINC00476Q8WZB0 136 aa10.2□□□□□ -0.78
LEMD3-201ENST00000308330 KRTAP10-11P60412 298 aa10.19□□□□□ -0.78
LEMD3-201ENST00000308330 IGLV9-49A0A0B4J1Y8 123 aa10.18□□□□□ -0.78
LEMD3-201ENST00000308330 LINC01558Q9Y6Z2 57 aa10.18□□□□□ -0.78
LEMD3-201ENST00000308330 A6NN06 94 aa10.17□□□□□ -0.78
LEMD3-201ENST00000308330 H3BNG1 76 aa10.17□□□□□ -0.78
LEMD3-201ENST00000308330 TACC2O95359 2948 aa10.17□□□□□ -0.78
LEMD3-201ENST00000308330 A8MWP4 228 aa10.15□□□□□ -0.78
LEMD3-201ENST00000308330 VCANP13611 3396 aa10.15□□□□□ -0.78
LEMD3-201ENST00000308330 RPL37AP61513 92 aaKnown RBP10.14□□□□□ -0.79
LEMD3-201ENST00000308330 FRYQ5TBA9 3013 aa10.14□□□□□ -0.79
LEMD3-201ENST00000308330 NSD1Q96L73 2696 aaPredicted RBP10.13□□□□□ -0.79
LEMD3-201ENST00000308330 ATMQ13315 3056 aa10.13□□□□□ -0.79
LEMD3-201ENST00000308330 COL12A1Q99715 3063 aa10.13□□□□□ -0.79
LEMD3-201ENST00000308330 NBDYA0A0U1RRE5 68 aa10.12□□□□□ -0.79
LEMD3-201ENST00000308330 ITPR2Q14571 2701 aa10.12□□□□□ -0.79
LEMD3-201ENST00000308330 IGLV6-57P01721 117 aa10.11□□□□□ -0.79
LEMD3-201ENST00000308330 LAMA1P25391 3075 aa10.11□□□□□ -0.79
LEMD3-201ENST00000308330 SPINK7P58062 85 aa10.1□□□□□ -0.79
LEMD3-201ENST00000308330 DMXL2Q8TDJ6 3036 aa10.1□□□□□ -0.79
LEMD3-201ENST00000308330 KCNQ1DNQ9H478 68 aa10.1□□□□□ -0.79
LEMD3-201ENST00000308330 C19orf73Q9NVV2 129 aa10.09□□□□□ -0.79
LEMD3-201ENST00000308330 C22orf24Q9Y442 160 aa10.08□□□□□ -0.8
LEMD3-201ENST00000308330 PRLHP81277 87 aa10.07□□□□□ -0.8
LEMD3-201ENST00000308330 CSNK1G2-AS1Q8NCQ2 148 aa10.07□□□□□ -0.8
LEMD3-201ENST00000308330 CELSR3Q9NYQ7 3312 aa10.07□□□□□ -0.8
LEMD3-201ENST00000308330 ITPR1Q14643 2758 aa10.07□□□□□ -0.8
LEMD3-201ENST00000308330 KRTAP16-1A8MUX0 517 aa10.07□□□□□ -0.8
LEMD3-201ENST00000308330 ASB16-AS1Q495Z4 193 aa10.07□□□□□ -0.8
LEMD3-201ENST00000308330 BOD1L1Q8NFC6 3051 aa10.06□□□□□ -0.8
LEMD3-201ENST00000308330 CIRBP-AS1Q8TBR5 109 aa10.06□□□□□ -0.8
LEMD3-201ENST00000308330 IGLV7-46A0A075B6I9 117 aa10.02□□□□□ -0.81
LEMD3-201ENST00000308330 GIG44P09565 113 aaPredicted RBP10.01□□□□□ -0.81
LEMD3-201ENST00000308330 TNRC18O15417 2968 aaPredicted RBP10.01□□□□□ -0.81
LEMD3-201ENST00000308330 LINC00528Q8N1L1 170 aa9.98□□□□□ -0.81
LEMD3-201ENST00000308330 A8MU10 97 aa9.98□□□□□ -0.81
LEMD3-201ENST00000308330 ZNF575Q86XF7 245 aa9.98□□□□□ -0.81
LEMD3-201ENST00000308330 C9orf163Q8N9P6 203 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms