RNA–Protein interactions for RNA: ENST00000306024.3

LSM3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM3, Length 3,815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3-201ENST00000306024 PLAC8L1A1L4L8 177 aa7.46□□□□□ -1.22
LSM3-201ENST00000306024 H3BQ85 93 aa7.46□□□□□ -1.22
LSM3-201ENST00000306024 C3orf84H3BNL1 204 aa7.45□□□□□ -1.22
LSM3-201ENST00000306024 M0R2N4 97 aa7.45□□□□□ -1.22
LSM3-201ENST00000306024 FBN1P35555 2871 aaKnown RBP7.45□□□□□ -1.22
LSM3-201ENST00000306024 Q8IZM0 81 aa7.45□□□□□ -1.22
LSM3-201ENST00000306024 FAM30AQ9NZY2 134 aa7.45□□□□□ -1.22
LSM3-201ENST00000306024 Q8NAQ8 132 aa7.45□□□□□ -1.22
LSM3-201ENST00000306024 DEFB105AQ8NG35 78 aa7.45□□□□□ -1.22
LSM3-201ENST00000306024 Q6ZTC4 211 aa7.44□□□□□ -1.22
LSM3-201ENST00000306024 COX7BP24311 80 aa7.44□□□□□ -1.22
LSM3-201ENST00000306024 LOC110117498A0A087WWA1 95 aa7.43□□□□□ -1.22
LSM3-201ENST00000306024 FAM229BQ4G0N7 80 aa7.43□□□□□ -1.22
LSM3-201ENST00000306024 UBE2DNLQ8IWF7 75 aa7.43□□□□□ -1.22
LSM3-201ENST00000306024 SPAG11BQ08648 103 aa7.42□□□□□ -1.22
LSM3-201ENST00000306024 C6orf223Q8N319 242 aa7.42□□□□□ -1.22
LSM3-201ENST00000306024 XAGE1AQ9HD64 81 aa7.42□□□□□ -1.22
LSM3-201ENST00000306024 KPRPQ5T749 579 aaPredicted RBP7.41□□□□□ -1.22
LSM3-201ENST00000306024 CHCHD10Q8WYQ3 142 aaPredicted RBP7.41□□□□□ -1.22
LSM3-201ENST00000306024 TRBV7-4A0A0J9YYF1 115 aa7.4□□□□□ -1.22
LSM3-201ENST00000306024 LINC00167Q96N53 147 aa7.4□□□□□ -1.23
LSM3-201ENST00000306024 EPM2AB3EWF7 344 aa7.39□□□□□ -1.23
LSM3-201ENST00000306024 COX17Q14061 63 aa7.39□□□□□ -1.23
LSM3-201ENST00000306024 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.38□□□□□ -1.23
LSM3-201ENST00000306024 CUBNO60494 3623 aa7.38□□□□□ -1.23
LSM3-201ENST00000306024 CHKB-CPT1BH3BT56 60 aa7.37□□□□□ -1.23
LSM3-201ENST00000306024 UNQ6190/PRO20217Q6UXQ8 127 aa7.37□□□□□ -1.23
LSM3-201ENST00000306024 CD164L2Q6UWJ8 174 aa7.36□□□□□ -1.23
LSM3-201ENST00000306024 ZNF73O43830 326 aaPredicted RBP7.36□□□□□ -1.23
LSM3-201ENST00000306024 REG3AQ06141 175 aa7.36□□□□□ -1.23
LSM3-201ENST00000306024 B9D2Q9BPU9 175 aa7.36□□□□□ -1.23
LSM3-201ENST00000306024 ERC2-IT1O76042 136 aa7.35□□□□□ -1.23
LSM3-201ENST00000306024 KLK12Q9UKR0 248 aa7.35□□□□□ -1.23
LSM3-201ENST00000306024 SMIM29Q86T20 159 aa7.34□□□□□ -1.23
LSM3-201ENST00000306024 MP68P56378 58 aa7.34□□□□□ -1.23
LSM3-201ENST00000306024 PKD1L1Q8TDX9 2849 aa7.33□□□□□ -1.24
LSM3-201ENST00000306024 UBE2BP63146 152 aa7.33□□□□□ -1.24
LSM3-201ENST00000306024 PRR15Q8IV56 129 aa7.33□□□□□ -1.24
LSM3-201ENST00000306024 LINC00612Q8N6U2 182 aa7.33□□□□□ -1.24
LSM3-201ENST00000306024 CD164Q04900 197 aa7.32□□□□□ -1.24
LSM3-201ENST00000306024 LELP1Q5T871 98 aa7.32□□□□□ -1.24
LSM3-201ENST00000306024 C1orf64Q8NEQ6 169 aa7.32□□□□□ -1.24
LSM3-201ENST00000306024 A8MUN3 132 aa7.32□□□□□ -1.24
LSM3-201ENST00000306024 STAB2Q8WWQ8 2551 aa7.31□□□□□ -1.24
LSM3-201ENST00000306024 TRRAPQ9Y4A5 3859 aa7.31□□□□□ -1.24
LSM3-201ENST00000306024 CAMK2N2Q96S95 79 aa7.31□□□□□ -1.24
LSM3-201ENST00000306024 A6NED7 52 aa7.3□□□□□ -1.24
LSM3-201ENST00000306024 IGKV2D-24A0A075B6R9 120 aa7.3□□□□□ -1.24
LSM3-201ENST00000306024 NKAPP1Q8N9T2 125 aa7.3□□□□□ -1.24
LSM3-201ENST00000306024 UBE2AP49459 152 aa7.29□□□□□ -1.24
LSM3-201ENST00000306024 PRR15LQ9BU68 103 aa7.29□□□□□ -1.24
LSM3-201ENST00000306024 TRAV22A0A0B4J277 110 aa7.29□□□□□ -1.24
LSM3-201ENST00000306024 IGKV4-1P06312 121 aa7.29□□□□□ -1.24
LSM3-201ENST00000306024 hDV103S1A0JD37 113 aa7.29□□□□□ -1.24
LSM3-201ENST00000306024 C10orf25Q5T742 122 aa7.29□□□□□ -1.24
LSM3-201ENST00000306024 ETDCA0A1B0GVM5 59 aa7.28□□□□□ -1.24
LSM3-201ENST00000306024 PSCAO43653 123 aa7.28□□□□□ -1.24
LSM3-201ENST00000306024 OCR1Q9BZK8 76 aa7.28□□□□□ -1.24
LSM3-201ENST00000306024 A0A1B0GUV1 79 aa7.27□□□□□ -1.25
LSM3-201ENST00000306024 NDUFB1O75438 58 aa7.27□□□□□ -1.25
LSM3-201ENST00000306024 WFDC10BQ8IUB3 73 aa7.26□□□□□ -1.25
LSM3-201ENST00000306024 WFDC13Q8IUB5 93 aa7.26□□□□□ -1.25
LSM3-201ENST00000306024 NUPR2A6NF83 97 aa7.26□□□□□ -1.25
LSM3-201ENST00000306024 TENM3Q9P273 2699 aa7.25□□□□□ -1.25
LSM3-201ENST00000306024 H3BNG1 76 aa7.25□□□□□ -1.25
LSM3-201ENST00000306024 Q6ZRP5 223 aa7.25□□□□□ -1.25
LSM3-201ENST00000306024 LINC00208Q96KT6 92 aa7.25□□□□□ -1.25
LSM3-201ENST00000306024 IGLV6-57P01721 117 aa7.24□□□□□ -1.25
LSM3-201ENST00000306024 KIAA0087Q14695 138 aa7.24□□□□□ -1.25
LSM3-201ENST00000306024 Q6ZRU5 148 aa7.24□□□□□ -1.25
LSM3-201ENST00000306024 M0R378 163 aa7.23□□□□□ -1.25
LSM3-201ENST00000306024 Q1T7F1 81 aa7.23□□□□□ -1.25
LSM3-201ENST00000306024 KRTAP21-3Q3LHN1 58 aa7.22□□□□□ -1.25
LSM3-201ENST00000306024 Q8NDZ9 215 aa7.22□□□□□ -1.25
LSM3-201ENST00000306024 ELOF1P60002 83 aaKnown RBP7.22□□□□□ -1.25
LSM3-201ENST00000306024 DEFB116Q30KQ4 102 aa7.22□□□□□ -1.25
LSM3-201ENST00000306024 C1orf137Q5JT78 98 aa7.2□□□□□ -1.26
LSM3-201ENST00000306024 HCG22E2RYF7 251 aa7.2□□□□□ -1.26
LSM3-201ENST00000306024 KTN1-AS1Q86SY8 53 aa7.19□□□□□ -1.26
LSM3-201ENST00000306024 SYCNQ0VAF6 134 aa7.19□□□□□ -1.26
LSM3-201ENST00000306024 LIMD2Q9BT23 127 aa7.19□□□□□ -1.26
LSM3-201ENST00000306024 LINC00588Q9Y4M8 146 aa7.18□□□□□ -1.26
LSM3-201ENST00000306024 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.17□□□□□ -1.26
LSM3-201ENST00000306024 NDUFS5O43920 106 aa7.17□□□□□ -1.26
LSM3-201ENST00000306024 LY6G6CO95867 125 aa7.17□□□□□ -1.26
LSM3-201ENST00000306024 C6orf48Q9UBA6 75 aa7.17□□□□□ -1.26
LSM3-201ENST00000306024 RBM12B-AS1Q9P1G2 102 aa7.16□□□□□ -1.26
LSM3-201ENST00000306024 LINC01556Q5JQF7 62 aa7.16□□□□□ -1.26
LSM3-201ENST00000306024 ST20-AS1Q8NBB2 130 aa7.15□□□□□ -1.27
LSM3-201ENST00000306024 K7EQZ3 153 aa7.14□□□□□ -1.27
LSM3-201ENST00000306024 WWC2-AS2Q96NR7 200 aa7.14□□□□□ -1.27
LSM3-201ENST00000306024 RPL37AP8A6NKH3 93 aa7.13□□□□□ -1.27
LSM3-201ENST00000306024 LINC00528Q8N1L1 170 aa7.13□□□□□ -1.27
LSM3-201ENST00000306024 H0Y9P7 68 aa7.12□□□□□ -1.27
LSM3-201ENST00000306024 DHRS4-AS1Q9P1J3 65 aa7.11□□□□□ -1.27
LSM3-201ENST00000306024 VPREB1P12018 145 aa7.11□□□□□ -1.27
LSM3-201ENST00000306024 Q8NBF4 154 aa7.1□□□□□ -1.27
LSM3-201ENST00000306024 DNAH10OSP0CZ25 163 aa7.1□□□□□ -1.27
LSM3-201ENST00000306024 ATP11AUNQ6ZP68 121 aa7.1□□□□□ -1.27
LSM3-201ENST00000306024 A8MU10 97 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms