RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 LINC00167Q96N53 147 aa8.92□□□□□ -0.98
DDX54-201ENST00000306014 GVQW2A0A096LPI5 108 aaPredicted RBP8.92□□□□□ -0.98
DDX54-201ENST00000306014 KRTAP1-1Q07627 177 aa8.92□□□□□ -0.98
DDX54-201ENST00000306014 NBEAL2Q6ZNJ1 2754 aa8.91□□□□□ -0.98
DDX54-201ENST00000306014 TEX15Q9BXT5 2789 aa8.91□□□□□ -0.98
DDX54-201ENST00000306014 Q6ZRP5 223 aa8.91□□□□□ -0.98
DDX54-201ENST00000306014 Q9BRP9 147 aa8.91□□□□□ -0.98
DDX54-201ENST00000306014 M0R2N4 97 aa8.9□□□□□ -0.99
DDX54-201ENST00000306014 PSPHP1O15172 72 aa8.89□□□□□ -0.99
DDX54-201ENST00000306014 C1orf195Q5TG92 126 aa8.89□□□□□ -0.99
DDX54-201ENST00000306014 LINC00612Q8N6U2 182 aa8.89□□□□□ -0.99
DDX54-201ENST00000306014 V9GYY9 64 aa8.89□□□□□ -0.99
DDX54-201ENST00000306014 SETXQ7Z333 2677 aaKnown RBP8.89□□□□□ -0.99
DDX54-201ENST00000306014 HCG22E2RYF7 251 aa8.89□□□□□ -0.99
DDX54-201ENST00000306014 SPINK6Q6UWN8 80 aa8.89□□□□□ -0.99
DDX54-201ENST00000306014 ST20-AS1Q8NBB2 130 aa8.88□□□□□ -0.99
DDX54-201ENST00000306014 COL6A5A8TX70 2615 aa8.88□□□□□ -0.99
DDX54-201ENST00000306014 STAB1Q9NY15 2570 aa8.88□□□□□ -0.99
DDX54-201ENST00000306014 CASC2Q6XLA1 102 aa8.88□□□□□ -0.99
DDX54-201ENST00000306014 ITPR1Q14643 2758 aa8.88□□□□□ -0.99
DDX54-201ENST00000306014 PRR34Q9NV39 138 aa8.87□□□□□ -0.99
DDX54-201ENST00000306014 ITPR2Q14571 2701 aa8.87□□□□□ -0.99
DDX54-201ENST00000306014 Q6ZRX8 168 aa8.87□□□□□ -0.99
DDX54-201ENST00000306014 OBSCN-AS1Q96MR7 158 aa8.86□□□□□ -0.99
DDX54-201ENST00000306014 H3BNG1 76 aa8.86□□□□□ -0.99
DDX54-201ENST00000306014 Q8NBF4 154 aa8.85□□□□□ -0.99
DDX54-201ENST00000306014 LINC00528Q8N1L1 170 aa8.85□□□□□ -0.99
DDX54-201ENST00000306014 KRTAP10-3P60369 221 aa8.85□□□□□ -0.99
DDX54-201ENST00000306014 PRO0628Q9UI54 55 aa8.85□□□□□ -0.99
DDX54-201ENST00000306014 A6NED7 52 aa8.84□□□□□ -0.99
DDX54-201ENST00000306014 DCHS1Q96JQ0 3298 aa8.83□□□□□ -1
DDX54-201ENST00000306014 SERTAD4-AS1Q5TG53 156 aa8.83□□□□□ -1
DDX54-201ENST00000306014 H0Y9P7 68 aa8.83□□□□□ -1
DDX54-201ENST00000306014 TRBV7-4A0A0J9YYF1 115 aa8.82□□□□□ -1
DDX54-201ENST00000306014 FAM168BA1KXE4 195 aa8.82□□□□□ -1
DDX54-201ENST00000306014 H7BZZ5 65 aa8.81□□□□□ -1
DDX54-201ENST00000306014 KLKP1Q107X0 134 aa8.81□□□□□ -1
DDX54-201ENST00000306014 PCOTHQ58A44 107 aa8.81□□□□□ -1
DDX54-201ENST00000306014 LINC00476Q8WZB0 136 aa8.81□□□□□ -1
DDX54-201ENST00000306014 CR1P17927 2039 aa8.81□□□□□ -1
DDX54-201ENST00000306014 C15orf56Q8N910 161 aa8.8□□□□□ -1
DDX54-201ENST00000306014 LINC00474Q9P2X8 69 aa8.8□□□□□ -1
DDX54-201ENST00000306014 PRR15LQ9BU68 103 aa8.79□□□□□ -1
DDX54-201ENST00000306014 IGHV6-1A0A0B4J1U7 121 aa8.78□□□□□ -1
DDX54-201ENST00000306014 A0A1B0GW54 56 aa8.78□□□□□ -1
DDX54-201ENST00000306014 SMG1Q96Q15 3661 aaKnown RBP8.78□□□□□ -1
DDX54-201ENST00000306014 KCNQ1DNQ9H478 68 aa8.77□□□□□ -1
DDX54-201ENST00000306014 LINC00588Q9Y4M8 146 aa8.77□□□□□ -1.01
DDX54-201ENST00000306014 ASH1LQ9NR48 2969 aaKnown RBP8.77□□□□□ -1.01
DDX54-201ENST00000306014 ZNF706Q9Y5V0 76 aaPredicted RBP8.77□□□□□ -1.01
DDX54-201ENST00000306014 UTP20O75691 2785 aaKnown RBP8.77□□□□□ -1.01
DDX54-201ENST00000306014 C4orf48Q5BLP8 95 aa8.76□□□□□ -1.01
DDX54-201ENST00000306014 Q8N377 158 aa8.76□□□□□ -1.01
DDX54-201ENST00000306014 UBR5O95071 2799 aaPredicted RBP8.76□□□□□ -1.01
DDX54-201ENST00000306014 K7EQZ3 153 aa8.75□□□□□ -1.01
DDX54-201ENST00000306014 SPENQ96T58 3664 aaKnown RBP8.75□□□□□ -1.01
DDX54-201ENST00000306014 PMAIP1Q13794 54 aa8.75□□□□□ -1.01
DDX54-201ENST00000306014 CYSTM1Q9H1C7 97 aa8.75□□□□□ -1.01
DDX54-201ENST00000306014 C1orf64Q8NEQ6 169 aa8.75□□□□□ -1.01
DDX54-201ENST00000306014 hDV103S1A0JD37 113 aa8.75□□□□□ -1.01
DDX54-201ENST00000306014 RPL37AP61513 92 aaKnown RBP8.74□□□□□ -1.01
DDX54-201ENST00000306014 ZANQ9Y493 2812 aa8.74□□□□□ -1.01
DDX54-201ENST00000306014 Q8NDZ9 215 aa8.74□□□□□ -1.01
DDX54-201ENST00000306014 DNAH10OSP0CZ25 163 aa8.73□□□□□ -1.01
DDX54-201ENST00000306014 IGLV1-50A0A075B6I6 118 aa8.73□□□□□ -1.01
DDX54-201ENST00000306014 ERC2-IT1O76042 136 aa8.72□□□□□ -1.01
DDX54-201ENST00000306014 NUPR2A6NF83 97 aa8.72□□□□□ -1.01
DDX54-201ENST00000306014 A0A0G2JQZ4 141 aa8.71□□□□□ -1.01
DDX54-201ENST00000306014 A0A1W2PNN7 141 aa8.71□□□□□ -1.01
DDX54-201ENST00000306014 PHF5AQ7RTV0 110 aaKnown RBP8.71□□□□□ -1.01
DDX54-201ENST00000306014 RELNP78509 3460 aa8.71□□□□□ -1.01
DDX54-201ENST00000306014 HRNRQ86YZ3 2850 aaPredicted RBP8.71□□□□□ -1.02
DDX54-201ENST00000306014 NOTCH1P46531 2555 aa8.71□□□□□ -1.02
DDX54-201ENST00000306014 LINC00336Q6ZUF6 198 aa8.7□□□□□ -1.02
DDX54-201ENST00000306014 APCP25054 2843 aa8.7□□□□□ -1.02
DDX54-201ENST00000306014 CHTF8P0CG12 524 aa8.7□□□□□ -1.02
DDX54-201ENST00000306014 LY6G6CO95867 125 aa8.69□□□□□ -1.02
DDX54-201ENST00000306014 CIRBP-AS1Q8TBR5 109 aa8.69□□□□□ -1.02
DDX54-201ENST00000306014 EPM2AB3EWF7 344 aa8.68□□□□□ -1.02
DDX54-201ENST00000306014 KRTAP10-11P60412 298 aa8.68□□□□□ -1.02
DDX54-201ENST00000306014 C16orf90A8MZG2 172 aa8.67□□□□□ -1.02
DDX54-201ENST00000306014 A0A1W2PNM2 257 aa8.66□□□□□ -1.02
DDX54-201ENST00000306014 IGFL1Q6UW32 110 aa8.64□□□□□ -1.03
DDX54-201ENST00000306014 CASC10Q5T4H9 136 aa8.64□□□□□ -1.03
DDX54-201ENST00000306014 HIVEP1P15822 2718 aa8.64□□□□□ -1.03
DDX54-201ENST00000306014 RETNLBQ9BQ08 111 aa8.62□□□□□ -1.03
DDX54-201ENST00000306014 LIMD2Q9BT23 127 aa8.62□□□□□ -1.03
DDX54-201ENST00000306014 TRAV22A0A0B4J277 110 aa8.61□□□□□ -1.03
DDX54-201ENST00000306014 SEC61GP60059 68 aa8.61□□□□□ -1.03
DDX54-201ENST00000306014 CRYBG3Q68DQ2 2970 aa8.61□□□□□ -1.03
DDX54-201ENST00000306014 MOBPQ13875 183 aa8.61□□□□□ -1.03
DDX54-201ENST00000306014 MDFIQ99750 246 aa8.6□□□□□ -1.03
DDX54-201ENST00000306014 IGLV5-48A0A075B6I7 105 aa8.59□□□□□ -1.03
DDX54-201ENST00000306014 IGLV5-52A0A0A0MRZ9 124 aa8.59□□□□□ -1.03
DDX54-201ENST00000306014 K7EIL1 84 aa8.59□□□□□ -1.03
DDX54-201ENST00000306014 TLX1NBP0CAT3 122 aa8.59□□□□□ -1.03
DDX54-201ENST00000306014 OCR1Q9BZK8 76 aa8.58□□□□□ -1.04
DDX54-201ENST00000306014 A8MUN3 132 aa8.58□□□□□ -1.04
DDX54-201ENST00000306014 A8MWP4 228 aa8.57□□□□□ -1.04
DDX54-201ENST00000306014 H3BPC8 53 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms