RNA–Protein interactions for RNA: ENST00000304514.11

RGPD3-201, Transcript of RANBP2-like and GRIP domain containing 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RGPD3, Length 5,510 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3-201ENST00000304514 JMJD1CQ15652 2540 aa4.66□□□□□ -1.66
RGPD3-201ENST00000304514 BAHCC1Q9P281 2608 aa4.66□□□□□ -1.66
RGPD3-201ENST00000304514 IGLV1-50A0A075B6I6 118 aa4.66□□□□□ -1.66
RGPD3-201ENST00000304514 USP17L23D6RBM5 183 aa4.66□□□□□ -1.66
RGPD3-201ENST00000304514 CXCL6P80162 114 aa4.66□□□□□ -1.66
RGPD3-201ENST00000304514 FAM19A1Q7Z5A9 133 aa4.66□□□□□ -1.66
RGPD3-201ENST00000304514 C9orf153Q5TBE3 101 aa4.65□□□□□ -1.66
RGPD3-201ENST00000304514 HELZ2Q9BYK8 2649 aaKnown RBP4.65□□□□□ -1.66
RGPD3-201ENST00000304514 SPRR1AP35321 89 aa4.65□□□□□ -1.66
RGPD3-201ENST00000304514 SERP2Q8N6R1 65 aa4.65□□□□□ -1.67
RGPD3-201ENST00000304514 Q9BRP9 147 aa4.65□□□□□ -1.67
RGPD3-201ENST00000304514 DNAH8Q96JB1 4490 aa4.65□□□□□ -1.67
RGPD3-201ENST00000304514 UBL5Q9BZL1 73 aa4.65□□□□□ -1.67
RGPD3-201ENST00000304514 PRYO14603 147 aa4.64□□□□□ -1.67
RGPD3-201ENST00000304514 CCDC168Q8NDH2 2452 aa4.63□□□□□ -1.67
RGPD3-201ENST00000304514 Q6ZRX8 168 aa4.63□□□□□ -1.67
RGPD3-201ENST00000304514 DNAH17Q9UFH2 4485 aa4.63□□□□□ -1.67
RGPD3-201ENST00000304514 PRB2P02812 416 aaPredicted RBP4.63□□□□□ -1.67
RGPD3-201ENST00000304514 HIVEP2P31629 2446 aa4.63□□□□□ -1.67
RGPD3-201ENST00000304514 Q8N377 158 aa4.63□□□□□ -1.67
RGPD3-201ENST00000304514 PKD1L1Q8TDX9 2849 aa4.62□□□□□ -1.67
RGPD3-201ENST00000304514 BCE1O60756 84 aa4.62□□□□□ -1.67
RGPD3-201ENST00000304514 TNP2Q05952 138 aa4.62□□□□□ -1.67
RGPD3-201ENST00000304514 IGLV5-48A0A075B6I7 105 aa4.62□□□□□ -1.67
RGPD3-201ENST00000304514 NKAPP1Q8N9T2 125 aa4.62□□□□□ -1.67
RGPD3-201ENST00000304514 GHRHP01286 108 aa4.62□□□□□ -1.67
RGPD3-201ENST00000304514 KRTAP1-5Q9BYS1 174 aa4.61□□□□□ -1.67
RGPD3-201ENST00000304514 DHRS4-AS1Q9P1J3 65 aa4.61□□□□□ -1.67
RGPD3-201ENST00000304514 KMT2AQ03164 3969 aa4.6□□□□□ -1.67
RGPD3-201ENST00000304514 RPL37AP8A6NKH3 93 aa4.6□□□□□ -1.67
RGPD3-201ENST00000304514 LOC107984640A0A0U1RRK4 108 aa4.6□□□□□ -1.67
RGPD3-201ENST00000304514 RMI2Q96E14 147 aa4.6□□□□□ -1.67
RGPD3-201ENST00000304514 MRPL55Q7Z7F7 128 aaKnown RBP4.59□□□□□ -1.67
RGPD3-201ENST00000304514 TENM3Q9P273 2699 aa4.59□□□□□ -1.67
RGPD3-201ENST00000304514 CNBPP62633 177 aaKnown RBP4.59□□□□□ -1.68
RGPD3-201ENST00000304514 COL7A1Q02388 2944 aa4.59□□□□□ -1.68
RGPD3-201ENST00000304514 IGKV4-1P06312 121 aa4.59□□□□□ -1.68
RGPD3-201ENST00000304514 C2CD3Q4AC94 2353 aa4.58□□□□□ -1.68
RGPD3-201ENST00000304514 APLNQ9ULZ1 77 aa4.58□□□□□ -1.68
RGPD3-201ENST00000304514 ST20-AS1Q8NBB2 130 aa4.58□□□□□ -1.68
RGPD3-201ENST00000304514 TMEM258P61165 79 aa4.58□□□□□ -1.68
RGPD3-201ENST00000304514 FAM19A5Q7Z5A7 132 aaPredicted RBP4.57□□□□□ -1.68
RGPD3-201ENST00000304514 MTORP42345 2549 aa4.57□□□□□ -1.68
RGPD3-201ENST00000304514 PKD1P98161 4303 aa4.57□□□□□ -1.68
RGPD3-201ENST00000304514 ERC2-IT1O76042 136 aa4.57□□□□□ -1.68
RGPD3-201ENST00000304514 REG3GQ6UW15 175 aa4.57□□□□□ -1.68
RGPD3-201ENST00000304514 SMIM29Q86T20 159 aa4.57□□□□□ -1.68
RGPD3-201ENST00000304514 SMIM20Q8N5G0 67 aa4.57□□□□□ -1.68
RGPD3-201ENST00000304514 TRAV7A0A075B6U4 112 aa4.57□□□□□ -1.68
RGPD3-201ENST00000304514 HAMPP81172 84 aa4.56□□□□□ -1.68
RGPD3-201ENST00000304514 DEFB105AQ8NG35 78 aa4.56□□□□□ -1.68
RGPD3-201ENST00000304514 C16orf90A8MZG2 172 aa4.56□□□□□ -1.68
RGPD3-201ENST00000304514 SCXQ7RTU7 201 aa4.56□□□□□ -1.68
RGPD3-201ENST00000304514 A0A096LNI7 61 aa4.56□□□□□ -1.68
RGPD3-201ENST00000304514 MAST4O15021 2626 aa4.56□□□□□ -1.68
RGPD3-201ENST00000304514 HECTD1Q9ULT8 2610 aa4.56□□□□□ -1.68
RGPD3-201ENST00000304514 A0A1B0GW54 56 aa4.56□□□□□ -1.68
RGPD3-201ENST00000304514 A0A1W2PNM2 257 aa4.56□□□□□ -1.68
RGPD3-201ENST00000304514 SPRR4Q96PI1 79 aa4.55□□□□□ -1.68
RGPD3-201ENST00000304514 DNAH11Q96DT5 4516 aa4.55□□□□□ -1.68
RGPD3-201ENST00000304514 RPS28P62857 69 aaKnown RBP4.55□□□□□ -1.68
RGPD3-201ENST00000304514 DPH3Q96FX2 82 aa4.55□□□□□ -1.68
RGPD3-201ENST00000304514 A0A1W2PNN7 141 aa4.55□□□□□ -1.68
RGPD3-201ENST00000304514 OXTP01178 125 aa4.55□□□□□ -1.68
RGPD3-201ENST00000304514 SETD2Q9BYW2 2564 aaPredicted RBP4.54□□□□□ -1.68
RGPD3-201ENST00000304514 SVIPQ8NHG7 77 aa4.54□□□□□ -1.68
RGPD3-201ENST00000304514 DNAH5Q8TE73 4624 aa4.54□□□□□ -1.68
RGPD3-201ENST00000304514 BPY2O14599 106 aa4.54□□□□□ -1.68
RGPD3-201ENST00000304514 KRTAP11-1Q8IUC1 163 aa4.54□□□□□ -1.68
RGPD3-201ENST00000304514 ETDCA0A1B0GVM5 59 aa4.54□□□□□ -1.68
RGPD3-201ENST00000304514 J3KT08 172 aa4.53□□□□□ -1.68
RGPD3-201ENST00000304514 KLKP1Q107X0 134 aa4.53□□□□□ -1.68
RGPD3-201ENST00000304514 EPM2AB3EWF7 344 aa4.53□□□□□ -1.68
RGPD3-201ENST00000304514 C3orf84H3BNL1 204 aa4.53□□□□□ -1.68
RGPD3-201ENST00000304514 FBN3Q75N90 2809 aa4.53□□□□□ -1.68
RGPD3-201ENST00000304514 IGLV8-61A0A075B6I0 122 aa4.53□□□□□ -1.68
RGPD3-201ENST00000304514 LRCOL1A6NCL2 159 aa4.53□□□□□ -1.68
RGPD3-201ENST00000304514 FAT2Q9NYQ8 4349 aa4.53□□□□□ -1.68
RGPD3-201ENST00000304514 H7BZZ5 65 aa4.53□□□□□ -1.68
RGPD3-201ENST00000304514 Q8N9L7 120 aa4.53□□□□□ -1.68
RGPD3-201ENST00000304514 NOTCH2Q04721 2471 aa4.52□□□□□ -1.69
RGPD3-201ENST00000304514 C1orf137Q5JT78 98 aa4.52□□□□□ -1.69
RGPD3-201ENST00000304514 Q6ZRN7 208 aaPredicted RBP4.52□□□□□ -1.69
RGPD3-201ENST00000304514 Q8NBF4 154 aa4.52□□□□□ -1.69
RGPD3-201ENST00000304514 OCR1Q9BZK8 76 aa4.51□□□□□ -1.69
RGPD3-201ENST00000304514 B9D2Q9BPU9 175 aa4.51□□□□□ -1.69
RGPD3-201ENST00000304514 ATRQ13535 2644 aa4.51□□□□□ -1.69
RGPD3-201ENST00000304514 NREPQ16612 68 aa4.51□□□□□ -1.69
RGPD3-201ENST00000304514 LCE6AA0A183 80 aa4.5□□□□□ -1.69
RGPD3-201ENST00000304514 C20orf197Q8N268 126 aa4.5□□□□□ -1.69
RGPD3-201ENST00000304514 LINC00476Q8WZB0 136 aa4.5□□□□□ -1.69
RGPD3-201ENST00000304514 H0Y9J4 135 aa4.5□□□□□ -1.69
RGPD3-201ENST00000304514 IGFL1Q6UW32 110 aa4.5□□□□□ -1.69
RGPD3-201ENST00000304514 DSCR10P59022 87 aa4.5□□□□□ -1.69
RGPD3-201ENST00000304514 UBE2BP63146 152 aa4.49□□□□□ -1.69
RGPD3-201ENST00000304514 FUSP35637 526 aaKnown RBP eCLIP4.49□□□□□ -1.69
RGPD3-201ENST00000304514 KRTAP13-1Q8IUC0 172 aa4.49□□□□□ -1.69
RGPD3-201ENST00000304514 PHF5AQ7RTV0 110 aaKnown RBP4.48□□□□□ -1.69
RGPD3-201ENST00000304514 MDFIQ99750 246 aa4.48□□□□□ -1.69
RGPD3-201ENST00000304514 PRLHP81277 87 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms