RNA–Protein interactions for RNA: ENST00000303296.8

HIPK3-201, Transcript of homeodomain interacting protein kinase 3, humanhuman

TSL 5 BASIC

Gene HIPK3, Length 7,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-201ENST00000303296 IGFL1Q6UW32 110 aa9.52□□□□□ -0.89
HIPK3-201ENST00000303296 PRR15Q8IV56 129 aa9.52□□□□□ -0.89
HIPK3-201ENST00000303296 WDR87Q6ZQQ6 2873 aa9.51□□□□□ -0.89
HIPK3-201ENST00000303296 GVQW2A0A096LPI5 108 aaPredicted RBP9.5□□□□□ -0.89
HIPK3-201ENST00000303296 A0A1W2PPR1 153 aa9.5□□□□□ -0.89
HIPK3-201ENST00000303296 KRTAP24-1Q3LI83 254 aa9.49□□□□□ -0.89
HIPK3-201ENST00000303296 Q6ZSA8 131 aa9.49□□□□□ -0.89
HIPK3-201ENST00000303296 H3BNG1 76 aa9.48□□□□□ -0.89
HIPK3-201ENST00000303296 Q1T7F1 81 aa9.46□□□□□ -0.89
HIPK3-201ENST00000303296 ZNF861PO60384 105 aa9.46□□□□□ -0.89
HIPK3-201ENST00000303296 C15orf56Q8N910 161 aa9.45□□□□□ -0.9
HIPK3-201ENST00000303296 COX8CQ7Z4L0 72 aa9.44□□□□□ -0.9
HIPK3-201ENST00000303296 Q8NAQ8 132 aa9.42□□□□□ -0.9
HIPK3-201ENST00000303296 A0A0A0MQY5 61 aa9.41□□□□□ -0.9
HIPK3-201ENST00000303296 SETD2Q9BYW2 2564 aaPredicted RBP9.38□□□□□ -0.91
HIPK3-201ENST00000303296 PRR26Q8N8Z3 221 aa9.37□□□□□ -0.91
HIPK3-201ENST00000303296 PSORS1C2Q9UIG4 136 aa9.34□□□□□ -0.91
HIPK3-201ENST00000303296 Q8N377 158 aa9.34□□□□□ -0.91
HIPK3-201ENST00000303296 USP9XQ93008 2570 aaPredicted RBP9.33□□□□□ -0.92
HIPK3-201ENST00000303296 PRO0461Q9UI25 63 aa9.33□□□□□ -0.92
HIPK3-201ENST00000303296 LINC00528Q8N1L1 170 aa9.33□□□□□ -0.92
HIPK3-201ENST00000303296 IGLV7-43P04211 117 aa9.33□□□□□ -0.92
HIPK3-201ENST00000303296 C9orf163Q8N9P6 203 aa9.33□□□□□ -0.92
HIPK3-201ENST00000303296 IGF2RP11717 2491 aa9.33□□□□□ -0.92
HIPK3-201ENST00000303296 LINC01546A6NGU7 62 aa9.32□□□□□ -0.92
HIPK3-201ENST00000303296 KCNQ1DNQ9H478 68 aa9.32□□□□□ -0.92
HIPK3-201ENST00000303296 A0A087WTM6 91 aa9.31□□□□□ -0.92
HIPK3-201ENST00000303296 ANKRD17O75179 2603 aaKnown RBP9.31□□□□□ -0.92
HIPK3-201ENST00000303296 H3BS24 57 aa9.31□□□□□ -0.92
HIPK3-201ENST00000303296 A0A1B0GU33 70 aa9.3□□□□□ -0.92
HIPK3-201ENST00000303296 NCOR2Q9Y618 2525 aa9.3□□□□□ -0.92
HIPK3-201ENST00000303296 SPINK7P58062 85 aa9.3□□□□□ -0.92
HIPK3-201ENST00000303296 BPTFQ12830 3046 aa9.29□□□□□ -0.92
HIPK3-201ENST00000303296 IGLV7-46A0A075B6I9 117 aa9.28□□□□□ -0.92
HIPK3-201ENST00000303296 MUC22E2RYF6 1773 aaPredicted RBP9.27□□□□□ -0.93
HIPK3-201ENST00000303296 HRES1P13985 223 aa9.27□□□□□ -0.93
HIPK3-201ENST00000303296 H1FX-AS1Q4G0G2 97 aa9.25□□□□□ -0.93
HIPK3-201ENST00000303296 PLAC4Q8WY50 150 aa9.25□□□□□ -0.93
HIPK3-201ENST00000303296 SPTBN4Q9H254 2564 aa9.25□□□□□ -0.93
HIPK3-201ENST00000303296 S4R3F8 94 aa9.24□□□□□ -0.93
HIPK3-201ENST00000303296 KRTAP10-11P60412 298 aa9.23□□□□□ -0.93
HIPK3-201ENST00000303296 MTORP42345 2549 aa9.23□□□□□ -0.93
HIPK3-201ENST00000303296 K7EIL1 84 aa9.23□□□□□ -0.93
HIPK3-201ENST00000303296 H7BZZ5 65 aa9.22□□□□□ -0.93
HIPK3-201ENST00000303296 KLKP1Q107X0 134 aa9.21□□□□□ -0.93
HIPK3-201ENST00000303296 SPRR4Q96PI1 79 aa9.19□□□□□ -0.94
HIPK3-201ENST00000303296 R4GN34 69 aa9.17□□□□□ -0.94
HIPK3-201ENST00000303296 USP24Q9UPU5 2620 aa9.17□□□□□ -0.94
HIPK3-201ENST00000303296 LINC00612Q8N6U2 182 aa9.16□□□□□ -0.94
HIPK3-201ENST00000303296 LITAFQ99732 161 aa9.15□□□□□ -0.94
HIPK3-201ENST00000303296 PRAC1Q96KF2 57 aa9.15□□□□□ -0.95
HIPK3-201ENST00000303296 SPANXA2-OT1Q8N9U9 137 aa9.14□□□□□ -0.95
HIPK3-201ENST00000303296 CSAG1Q6PB30 78 aa9.14□□□□□ -0.95
HIPK3-201ENST00000303296 CASC10Q5T4H9 136 aa9.11□□□□□ -0.95
HIPK3-201ENST00000303296 DMAC1Q96GE9 116 aa9.1□□□□□ -0.95
HIPK3-201ENST00000303296 EIF4EBP3O60516 100 aaPredicted RBP9.1□□□□□ -0.95
HIPK3-201ENST00000303296 Q5VSD8 79 aa9.06□□□□□ -0.96
HIPK3-201ENST00000303296 POLQO75417 2590 aa9.05□□□□□ -0.96
HIPK3-201ENST00000303296 A0A1W2PNM2 257 aa9.05□□□□□ -0.96
HIPK3-201ENST00000303296 CHD8Q9HCK8 2581 aa9.04□□□□□ -0.96
HIPK3-201ENST00000303296 CENPFP49454 3210 aa9.03□□□□□ -0.96
HIPK3-201ENST00000303296 COL4A2P08572 1712 aa9.02□□□□□ -0.97
HIPK3-201ENST00000303296 TNP2Q05952 138 aa9.02□□□□□ -0.97
HIPK3-201ENST00000303296 PRR34Q9NV39 138 aa9□□□□□ -0.97
HIPK3-201ENST00000303296 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9□□□□□ -0.97
HIPK3-201ENST00000303296 Q8N9P0 234 aaPredicted RBP8.97□□□□□ -0.97
HIPK3-201ENST00000303296 M0QZ58 72 aa8.97□□□□□ -0.97
HIPK3-201ENST00000303296 C19orf73Q9NVV2 129 aa8.95□□□□□ -0.98
HIPK3-201ENST00000303296 Q75L30 129 aa8.95□□□□□ -0.98
HIPK3-201ENST00000303296 GIG44P09565 113 aaPredicted RBP8.94□□□□□ -0.98
HIPK3-201ENST00000303296 ZCCHC13Q8WW36 166 aaKnown RBP8.94□□□□□ -0.98
HIPK3-201ENST00000303296 EPG5Q9HCE0 2579 aa8.94□□□□□ -0.98
HIPK3-201ENST00000303296 FAM229BQ4G0N7 80 aa8.93□□□□□ -0.98
HIPK3-201ENST00000303296 KRTAP10-3P60369 221 aa8.91□□□□□ -0.98
HIPK3-201ENST00000303296 USP9YO00507 2555 aaPredicted RBP8.91□□□□□ -0.98
HIPK3-201ENST00000303296 ROMO1P60602 79 aa8.91□□□□□ -0.98
HIPK3-201ENST00000303296 CNBPP62633 177 aaKnown RBP8.91□□□□□ -0.98
HIPK3-201ENST00000303296 C20orf166-AS1Q96NR2 134 aa8.88□□□□□ -0.99
HIPK3-201ENST00000303296 SEC61BP60468 96 aaKnown RBP8.87□□□□□ -0.99
HIPK3-201ENST00000303296 OCR1Q9BZK8 76 aa8.87□□□□□ -0.99
HIPK3-201ENST00000303296 LINC01558Q9Y6Z2 57 aa8.86□□□□□ -0.99
HIPK3-201ENST00000303296 FASNP49327 2511 aaKnown RBP8.85□□□□□ -0.99
HIPK3-201ENST00000303296 ANKRD11Q6UB99 2663 aaPredicted RBP8.85□□□□□ -0.99
HIPK3-201ENST00000303296 RPL37P61927 97 aaKnown RBP8.84□□□□□ -0.99
HIPK3-201ENST00000303296 ADM2Q7Z4H4 148 aa8.83□□□□□ -1
HIPK3-201ENST00000303296 FP248Q71RG6 208 aaPredicted RBP8.82□□□□□ -1
HIPK3-201ENST00000303296 C10orf142B7Z368 130 aa8.8□□□□□ -1
HIPK3-201ENST00000303296 KRTAP16-1A8MUX0 517 aa8.79□□□□□ -1
HIPK3-201ENST00000303296 Q5W150 140 aa8.79□□□□□ -1
HIPK3-201ENST00000303296 KLK9Q2XQG4 91 aa8.78□□□□□ -1
HIPK3-201ENST00000303296 SPATA8Q6RVD6 105 aa8.77□□□□□ -1.01
HIPK3-201ENST00000303296 Q8NDZ9 215 aa8.72□□□□□ -1.01
HIPK3-201ENST00000303296 Q5VV11 94 aa8.71□□□□□ -1.01
HIPK3-201ENST00000303296 PRRC2CQ9Y520 2896 aaKnown RBP8.7□□□□□ -1.02
HIPK3-201ENST00000303296 MMP24-AS1A0A0U1RRL7 71 aa8.7□□□□□ -1.02
HIPK3-201ENST00000303296 MGAM2Q2M2H8 2515 aa8.67□□□□□ -1.02
HIPK3-201ENST00000303296 DMBT1Q9UGM3 2413 aaPredicted RBP8.64□□□□□ -1.03
HIPK3-201ENST00000303296 GOLGB1Q14789 3259 aaKnown RBP8.59□□□□□ -1.03
HIPK3-201ENST00000303296 CEP350Q5VT06 3117 aa8.59□□□□□ -1.03
HIPK3-201ENST00000303296 Q5XG85 94 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms