RNA–Protein interactions for RNA: ENST00000301935.9

UBXN1-202, Transcript of UBX domain protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene UBXN1, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-202ENST00000301935 RAB37Q96AX2 223 aa9.48□□□□□ -0.89
UBXN1-202ENST00000301935 A0A1B0GWB2 263 aa9.47□□□□□ -0.89
UBXN1-202ENST00000301935 PRR3P79522 188 aaKnown RBP9.47□□□□□ -0.89
UBXN1-202ENST00000301935 KRTAP7-1Q8IUC3 87 aa9.47□□□□□ -0.89
UBXN1-202ENST00000301935 Q8NDZ9 215 aa9.47□□□□□ -0.89
UBXN1-202ENST00000301935 NCR3O14931 201 aa9.46□□□□□ -0.9
UBXN1-202ENST00000301935 OR13C6PQ8NH95 151 aa9.46□□□□□ -0.9
UBXN1-202ENST00000301935 NHP2Q9NX24 153 aaKnown RBP9.46□□□□□ -0.9
UBXN1-202ENST00000301935 PRO1854Q9UHT4 67 aa9.46□□□□□ -0.9
UBXN1-202ENST00000301935 IGLV6-57P01721 117 aa9.45□□□□□ -0.9
UBXN1-202ENST00000301935 LINC00337Q8N6G1 96 aa9.45□□□□□ -0.9
UBXN1-202ENST00000301935 C7orf33Q8WU49 177 aa9.45□□□□□ -0.9
UBXN1-202ENST00000301935 LINC00167Q96N53 147 aa9.45□□□□□ -0.9
UBXN1-202ENST00000301935 RPL37AP61513 92 aaKnown RBP9.44□□□□□ -0.9
UBXN1-202ENST00000301935 IGLV1-50A0A075B6I6 118 aa9.43□□□□□ -0.9
UBXN1-202ENST00000301935 TRBV10-3A0A0K0K1G6 114 aa9.42□□□□□ -0.9
UBXN1-202ENST00000301935 UBE2BP63146 152 aa9.42□□□□□ -0.9
UBXN1-202ENST00000301935 BATFQ16520 125 aa9.42□□□□□ -0.9
UBXN1-202ENST00000301935 PHF5AQ7RTV0 110 aaKnown RBP9.42□□□□□ -0.9
UBXN1-202ENST00000301935 KCNQ1DNQ9H478 68 aa9.42□□□□□ -0.9
UBXN1-202ENST00000301935 GAGE10A6NGK3 116 aa9.41□□□□□ -0.9
UBXN1-202ENST00000301935 RPL13AP40429 203 aaKnown RBP9.41□□□□□ -0.9
UBXN1-202ENST00000301935 PRYO14603 147 aa9.4□□□□□ -0.9
UBXN1-202ENST00000301935 SNHG12Q9BXW3 62 aa9.4□□□□□ -0.9
UBXN1-202ENST00000301935 TRAV23DV6A0A075B6W5 121 aa9.39□□□□□ -0.91
UBXN1-202ENST00000301935 RPL37AP8A6NKH3 93 aa9.38□□□□□ -0.91
UBXN1-202ENST00000301935 COL5A1-AS1Q5SY13 56 aa9.38□□□□□ -0.91
UBXN1-202ENST00000301935 RPL28P46779 137 aaKnown RBP9.37□□□□□ -0.91
UBXN1-202ENST00000301935 Q1RN00 199 aa9.37□□□□□ -0.91
UBXN1-202ENST00000301935 TRBV7-6A0A0J9YX20 115 aa9.36□□□□□ -0.91
UBXN1-202ENST00000301935 K7ERJ3 54 aa9.36□□□□□ -0.91
UBXN1-202ENST00000301935 VAMP3Q15836 100 aa9.36□□□□□ -0.91
UBXN1-202ENST00000301935 REG3GQ6UW15 175 aa9.36□□□□□ -0.91
UBXN1-202ENST00000301935 SMIM11BQ8TCY0 68 aa9.36□□□□□ -0.91
UBXN1-202ENST00000301935 ZNF73O43830 326 aaPredicted RBP9.35□□□□□ -0.91
UBXN1-202ENST00000301935 MT1HL1P0DM35 61 aa9.35□□□□□ -0.91
UBXN1-202ENST00000301935 DIRC1Q969H9 104 aa9.35□□□□□ -0.91
UBXN1-202ENST00000301935 H7C2G1 150 aa9.34□□□□□ -0.91
UBXN1-202ENST00000301935 COX6CP09669 75 aa9.34□□□□□ -0.91
UBXN1-202ENST00000301935 SPRR1AP35321 89 aa9.34□□□□□ -0.91
UBXN1-202ENST00000301935 TSPAN13O95857 204 aa9.33□□□□□ -0.92
UBXN1-202ENST00000301935 ETDCA0A1B0GVM5 59 aa9.32□□□□□ -0.92
UBXN1-202ENST00000301935 H0YGX0 51 aa9.32□□□□□ -0.92
UBXN1-202ENST00000301935 BCE1O60756 84 aa9.32□□□□□ -0.92
UBXN1-202ENST00000301935 PSMB2P49721 201 aa9.31□□□□□ -0.92
UBXN1-202ENST00000301935 C6orf99Q4VX62 202 aa9.31□□□□□ -0.92
UBXN1-202ENST00000301935 PSORS1C2Q9UIG4 136 aa9.31□□□□□ -0.92
UBXN1-202ENST00000301935 TNXBP22105 4242 aa9.3□□□□□ -0.92
UBXN1-202ENST00000301935 H0Y9J4 135 aa9.3□□□□□ -0.92
UBXN1-202ENST00000301935 SNCGO76070 127 aa9.3□□□□□ -0.92
UBXN1-202ENST00000301935 LYRM7Q5U5X0 104 aa9.3□□□□□ -0.92
UBXN1-202ENST00000301935 LRP2P98164 4655 aa9.3□□□□□ -0.92
UBXN1-202ENST00000301935 C9orf118A6NHY6 69 aa9.29□□□□□ -0.92
UBXN1-202ENST00000301935 KRTAP4-16G5E9R7 235 aaPredicted RBP9.29□□□□□ -0.92
UBXN1-202ENST00000301935 TAX1BP3O14907 124 aa9.29□□□□□ -0.92
UBXN1-202ENST00000301935 COX7BP24311 80 aa9.29□□□□□ -0.92
UBXN1-202ENST00000301935 KRTAP11-1Q8IUC1 163 aa9.29□□□□□ -0.92
UBXN1-202ENST00000301935 ELOF1P60002 83 aaKnown RBP9.28□□□□□ -0.92
UBXN1-202ENST00000301935 RNF213Q63HN8 5207 aa9.27□□□□□ -0.93
UBXN1-202ENST00000301935 B5MCH6 92 aa9.27□□□□□ -0.93
UBXN1-202ENST00000301935 TRIAP1O43715 76 aa9.27□□□□□ -0.93
UBXN1-202ENST00000301935 SCGB1C2P0DMR2 95 aa9.27□□□□□ -0.93
UBXN1-202ENST00000301935 UBE2AP49459 152 aa9.27□□□□□ -0.93
UBXN1-202ENST00000301935 C1orf137Q5JT78 98 aa9.27□□□□□ -0.93
UBXN1-202ENST00000301935 FAM19A1Q7Z5A9 133 aa9.27□□□□□ -0.93
UBXN1-202ENST00000301935 SLC25A20O43772 301 aa9.26□□□□□ -0.93
UBXN1-202ENST00000301935 Q6ZRX8 168 aa9.26□□□□□ -0.93
UBXN1-202ENST00000301935 DHRS4-AS1Q9P1J3 65 aa9.26□□□□□ -0.93
UBXN1-202ENST00000301935 A0A1B0GX51 115 aa9.25□□□□□ -0.93
UBXN1-202ENST00000301935 H3BUT2 72 aa9.24□□□□□ -0.93
UBXN1-202ENST00000301935 IGLV7-43P04211 117 aa9.24□□□□□ -0.93
UBXN1-202ENST00000301935 TRBV20-1A0A075B6N2 111 aa9.23□□□□□ -0.93
UBXN1-202ENST00000301935 ZNF861PO60384 105 aa9.23□□□□□ -0.93
UBXN1-202ENST00000301935 FABP2P12104 132 aa9.23□□□□□ -0.93
UBXN1-202ENST00000301935 A0A1W2PPM0 123 aa9.22□□□□□ -0.93
UBXN1-202ENST00000301935 LINC00575Q6W349 94 aa9.22□□□□□ -0.93
UBXN1-202ENST00000301935 KRTAP13-1Q8IUC0 172 aa9.22□□□□□ -0.93
UBXN1-202ENST00000301935 hADV29S1A0JD25 119 aa9.2□□□□□ -0.94
UBXN1-202ENST00000301935 GHRHP01286 108 aa9.19□□□□□ -0.94
UBXN1-202ENST00000301935 PRLHP81277 87 aa9.19□□□□□ -0.94
UBXN1-202ENST00000301935 NAA38Q9BRA0 125 aaKnown RBP9.19□□□□□ -0.94
UBXN1-202ENST00000301935 ATXN8Q156A1 80 aa9.18□□□□□ -0.94
UBXN1-202ENST00000301935 Q9BRP9 147 aa9.18□□□□□ -0.94
UBXN1-202ENST00000301935 LST1O00453 97 aa9.17□□□□□ -0.94
UBXN1-202ENST00000301935 TRACP01848 142 aa9.17□□□□□ -0.94
UBXN1-202ENST00000301935 OCIAD2Q56VL3 154 aa9.17□□□□□ -0.94
UBXN1-202ENST00000301935 HIGD2AQ9BW72 106 aa9.17□□□□□ -0.94
UBXN1-202ENST00000301935 H3BQ85 93 aa9.16□□□□□ -0.94
UBXN1-202ENST00000301935 DNAL4O96015 105 aa9.16□□□□□ -0.94
UBXN1-202ENST00000301935 SPINK6Q6UWN8 80 aa9.16□□□□□ -0.94
UBXN1-202ENST00000301935 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.16□□□□□ -0.94
UBXN1-202ENST00000301935 SMCR5Q8TEV8 140 aa9.16□□□□□ -0.94
UBXN1-202ENST00000301935 CLEC2BQ92478 149 aa9.16□□□□□ -0.94
UBXN1-202ENST00000301935 LINC01600Q96MT4 127 aa9.16□□□□□ -0.94
UBXN1-202ENST00000301935 ZNF706Q9Y5V0 76 aaPredicted RBP9.16□□□□□ -0.94
UBXN1-202ENST00000301935 TCL1BO95988 128 aa9.14□□□□□ -0.95
UBXN1-202ENST00000301935 FAM218AQ96MZ4 157 aa9.14□□□□□ -0.95
UBXN1-202ENST00000301935 SPCS1Q9Y6A9 102 aa9.13□□□□□ -0.95
UBXN1-202ENST00000301935 GTF2H5Q6ZYL4 71 aa9.12□□□□□ -0.95
UBXN1-202ENST00000301935 PPDPFLQ8WWR9 84 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms