RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 LYRM7Q5U5X0 104 aa15.44■□□□□ 0.06
GTF2A1-201ENST00000298173 SPCS1Q9Y6A9 102 aa15.42■□□□□ 0.06
GTF2A1-201ENST00000298173 PKHD1P08F94 4074 aa15.41■□□□□ 0.06
GTF2A1-201ENST00000298173 H0YGX0 51 aa15.41■□□□□ 0.06
GTF2A1-201ENST00000298173 PRYO14603 147 aa15.41■□□□□ 0.06
GTF2A1-201ENST00000298173 TCL1BO95988 128 aa15.41■□□□□ 0.06
GTF2A1-201ENST00000298173 SPRR1AP35321 89 aa15.41■□□□□ 0.06
GTF2A1-201ENST00000298173 KRTAP11-1Q8IUC1 163 aa15.4■□□□□ 0.06
GTF2A1-201ENST00000298173 TRBV20-1A0A075B6N2 111 aa15.39■□□□□ 0.05
GTF2A1-201ENST00000298173 DIRC1Q969H9 104 aa15.39■□□□□ 0.05
GTF2A1-201ENST00000298173 KRTAP4-16G5E9R7 235 aaPredicted RBP15.38■□□□□ 0.05
GTF2A1-201ENST00000298173 K7EP34 96 aa15.38■□□□□ 0.05
GTF2A1-201ENST00000298173 CLEC2BQ92478 149 aa15.38■□□□□ 0.05
GTF2A1-201ENST00000298173 TRBV7-6A0A0J9YX20 115 aa15.38■□□□□ 0.05
GTF2A1-201ENST00000298173 CIRBP-AS1Q8TBR5 109 aa15.37■□□□□ 0.05
GTF2A1-201ENST00000298173 FAM218AQ96MZ4 157 aa15.37■□□□□ 0.05
GTF2A1-201ENST00000298173 LRP1BQ9NZR2 4599 aa15.37■□□□□ 0.05
GTF2A1-201ENST00000298173 LST1O00453 97 aa15.35■□□□□ 0.05
GTF2A1-201ENST00000298173 UBE2BP63146 152 aa15.35■□□□□ 0.05
GTF2A1-201ENST00000298173 REG3GQ6UW15 175 aa15.35■□□□□ 0.05
GTF2A1-201ENST00000298173 ELOF1P60002 83 aaKnown RBP15.34■□□□□ 0.05
GTF2A1-201ENST00000298173 GTF2H5Q6ZYL4 71 aa15.34■□□□□ 0.05
GTF2A1-201ENST00000298173 DYNC1H1Q14204 4646 aaKnown RBP15.33■□□□□ 0.05
GTF2A1-201ENST00000298173 SCXQ7RTU7 201 aa15.33■□□□□ 0.04
GTF2A1-201ENST00000298173 ATXN8Q156A1 80 aa15.32■□□□□ 0.04
GTF2A1-201ENST00000298173 H3BMG7 143 aa15.32■□□□□ 0.04
GTF2A1-201ENST00000298173 COX7BP24311 80 aa15.32■□□□□ 0.04
GTF2A1-201ENST00000298173 UBE2V1Q13404 147 aa15.31■□□□□ 0.04
GTF2A1-201ENST00000298173 LINC00575Q6W349 94 aa15.3■□□□□ 0.04
GTF2A1-201ENST00000298173 LINC00528Q8N1L1 170 aa15.3■□□□□ 0.04
GTF2A1-201ENST00000298173 B5MCH6 92 aa15.28■□□□□ 0.04
GTF2A1-201ENST00000298173 A0A1B0GX51 115 aa15.27■□□□□ 0.03
GTF2A1-201ENST00000298173 TRACP01848 142 aa15.27■□□□□ 0.03
GTF2A1-201ENST00000298173 ETDCA0A1B0GVM5 59 aa15.25■□□□□ 0.03
GTF2A1-201ENST00000298173 Q6ZRX8 168 aa15.25■□□□□ 0.03
GTF2A1-201ENST00000298173 HAMPP81172 84 aa15.23■□□□□ 0.03
GTF2A1-201ENST00000298173 INAFM2P0DMQ5 153 aa15.22■□□□□ 0.03
GTF2A1-201ENST00000298173 hADV29S1A0JD25 119 aa15.22■□□□□ 0.03
GTF2A1-201ENST00000298173 Q9BRP9 147 aa15.21■□□□□ 0.03
GTF2A1-201ENST00000298173 PSORS1C2Q9UIG4 136 aa15.21■□□□□ 0.03
GTF2A1-201ENST00000298173 PRO0461Q9UI25 63 aa15.2■□□□□ 0.02
GTF2A1-201ENST00000298173 BCE1O60756 84 aa15.19■□□□□ 0.02
GTF2A1-201ENST00000298173 FAM19A1Q7Z5A9 133 aa15.19■□□□□ 0.02
GTF2A1-201ENST00000298173 H0Y9J4 135 aa15.19■□□□□ 0.02
GTF2A1-201ENST00000298173 XGP55808 180 aa15.19■□□□□ 0.02
GTF2A1-201ENST00000298173 SLC25A20O43772 301 aa15.18■□□□□ 0.02
GTF2A1-201ENST00000298173 C9JAW5 83 aa15.17■□□□□ 0.02
GTF2A1-201ENST00000298173 SNCGO76070 127 aa15.17■□□□□ 0.02
GTF2A1-201ENST00000298173 DHRS4-AS1Q9P1J3 65 aa15.17■□□□□ 0.02
GTF2A1-201ENST00000298173 KRTAP13-1Q8IUC0 172 aa15.16■□□□□ 0.02
GTF2A1-201ENST00000298173 PRLHP81277 87 aa15.16■□□□□ 0.02
GTF2A1-201ENST00000298173 APOBP04114 4563 aaKnown RBP15.15■□□□□ 0.02
GTF2A1-201ENST00000298173 MTURNQ8N3F0 131 aa15.15■□□□□ 0.02
GTF2A1-201ENST00000298173 SMCR5Q8TEV8 140 aa15.15■□□□□ 0.02
GTF2A1-201ENST00000298173 DNAL4O96015 105 aa15.14■□□□□ 0.01
GTF2A1-201ENST00000298173 F8W1H4 67 aa15.13■□□□□ 0.01
GTF2A1-201ENST00000298173 SMCPP49901 116 aaPredicted RBP15.13■□□□□ 0.01
GTF2A1-201ENST00000298173 LINC01600Q96MT4 127 aa15.12■□□□□ 0.01
GTF2A1-201ENST00000298173 C1orf137Q5JT78 98 aa15.11■□□□□ 0.01
GTF2A1-201ENST00000298173 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP15.11■□□□□ 0.01
GTF2A1-201ENST00000298173 ERC2-IT1O76042 136 aa15.1■□□□□ 0.01
GTF2A1-201ENST00000298173 Q6ZQY7 126 aa15.1■□□□□ 0.01
GTF2A1-201ENST00000298173 UBE2AP49459 152 aa15.09■□□□□ 0.01
GTF2A1-201ENST00000298173 BAALC-AS2P0C853 105 aa15.09■□□□□ 0.01
GTF2A1-201ENST00000298173 ORMDL1Q9P0S3 153 aa15.08■□□□□ 0
GTF2A1-201ENST00000298173 H3BT86 120 aa15.07■□□□□ 0
GTF2A1-201ENST00000298173 ANKRD29Q8N6D5 301 aa15.07■□□□□ 0
GTF2A1-201ENST00000298173 HIGD2AQ9BW72 106 aa15.06■□□□□ 0
GTF2A1-201ENST00000298173 IGLV7-43P04211 117 aa15.04■□□□□ -0
GTF2A1-201ENST00000298173 OCIAD2Q56VL3 154 aa15.04■□□□□ -0
GTF2A1-201ENST00000298173 ZNF861PO60384 105 aa15.03■□□□□ -0
GTF2A1-201ENST00000298173 LINC01547P58512 204 aaPredicted RBP15.02□□□□□ -0.01
GTF2A1-201ENST00000298173 ST20-AS1Q8NBB2 130 aa15.02□□□□□ -0.01
GTF2A1-201ENST00000298173 TMEM256-PLSCR3K7ERE1 68 aa15.01□□□□□ -0.01
GTF2A1-201ENST00000298173 VPS13BQ7Z7G8 4022 aa15.01□□□□□ -0.01
GTF2A1-201ENST00000298173 IGLV5-48A0A075B6I7 105 aa15□□□□□ -0.01
GTF2A1-201ENST00000298173 H3BQ85 93 aa14.99□□□□□ -0.01
GTF2A1-201ENST00000298173 GHRHP01286 108 aa14.98□□□□□ -0.01
GTF2A1-201ENST00000298173 Q8N377 158 aa14.97□□□□□ -0.01
GTF2A1-201ENST00000298173 EPPK1P58107 5090 aaKnown RBP14.97□□□□□ -0.01
GTF2A1-201ENST00000298173 SRRM2Q9UQ35 2752 aaKnown RBP14.97□□□□□ -0.01
GTF2A1-201ENST00000298173 SMR3BP02814 79 aaPredicted RBP14.97□□□□□ -0.01
GTF2A1-201ENST00000298173 CDK2AP2O75956 126 aa14.96□□□□□ -0.01
GTF2A1-201ENST00000298173 ETDBQ3ZM63 59 aa14.94□□□□□ -0.02
GTF2A1-201ENST00000298173 DEFB105AQ8NG35 78 aa14.94□□□□□ -0.02
GTF2A1-201ENST00000298173 PPDPFLQ8WWR9 84 aa14.94□□□□□ -0.02
GTF2A1-201ENST00000298173 TEN1Q86WV5 123 aa14.92□□□□□ -0.02
GTF2A1-201ENST00000298173 TEX49A0A1B0GTD5 131 aa14.91□□□□□ -0.02
GTF2A1-201ENST00000298173 RPL37AP61513 92 aaKnown RBP14.9□□□□□ -0.02
GTF2A1-201ENST00000298173 FAT1Q14517 4588 aa14.9□□□□□ -0.02
GTF2A1-201ENST00000298173 SPRR1BP22528 89 aa14.9□□□□□ -0.02
GTF2A1-201ENST00000298173 OBSCN-AS1Q96MR7 158 aa14.88□□□□□ -0.03
GTF2A1-201ENST00000298173 KRTAP10-4P60372 401 aaPredicted RBP14.87□□□□□ -0.03
GTF2A1-201ENST00000298173 SMIM29Q86T20 159 aa14.87□□□□□ -0.03
GTF2A1-201ENST00000298173 SPRR4Q96PI1 79 aa14.87□□□□□ -0.03
GTF2A1-201ENST00000298173 NDUFV3P56181 108 aaKnown RBP14.86□□□□□ -0.03
GTF2A1-201ENST00000298173 HSPG2P98160 4391 aa14.86□□□□□ -0.03
GTF2A1-201ENST00000298173 GAGE2AQ6NT46 116 aa14.85□□□□□ -0.03
GTF2A1-201ENST00000298173 RYR1P21817 5038 aa14.84□□□□□ -0.03
GTF2A1-201ENST00000298173 LAMTOR3Q9UHA4 124 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms