RNA–Protein interactions for RNA: ENST00000297537.4

GBX1-201, Transcript of gastrulation brain homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GBX1, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GBX1-201ENST00000297537 CRYGAP11844 174 aa13.84□□□□□ -0.19
GBX1-201ENST00000297537 Q6ZVH6 145 aa13.84□□□□□ -0.19
GBX1-201ENST00000297537 FAM229BQ4G0N7 80 aa13.83□□□□□ -0.2
GBX1-201ENST00000297537 IFITM1P13164 125 aa13.82□□□□□ -0.2
GBX1-201ENST00000297537 TRAV23DV6A0A075B6W5 121 aa13.81□□□□□ -0.2
GBX1-201ENST00000297537 SMCR5Q8TEV8 140 aa13.81□□□□□ -0.2
GBX1-201ENST00000297537 KRTAP13-2Q52LG2 175 aa13.8□□□□□ -0.2
GBX1-201ENST00000297537 LINC00518Q8N0U6 118 aa13.8□□□□□ -0.2
GBX1-201ENST00000297537 Q6ZRX8 168 aa13.78□□□□□ -0.2
GBX1-201ENST00000297537 MUSTN1Q8IVN3 82 aa13.78□□□□□ -0.2
GBX1-201ENST00000297537 COPS9Q8WXC6 57 aa13.78□□□□□ -0.2
GBX1-201ENST00000297537 SPRR4Q96PI1 79 aa13.78□□□□□ -0.2
GBX1-201ENST00000297537 ZNF73O43830 326 aaPredicted RBP13.77□□□□□ -0.21
GBX1-201ENST00000297537 OR13C6PQ8NH95 151 aa13.76□□□□□ -0.21
GBX1-201ENST00000297537 Q9BRP9 147 aa13.76□□□□□ -0.21
GBX1-201ENST00000297537 CBY1Q9Y3M2 126 aa13.76□□□□□ -0.21
GBX1-201ENST00000297537 TYMSOSQ8TAI1 123 aa13.75□□□□□ -0.21
GBX1-201ENST00000297537 ERC2-IT1O76042 136 aa13.73□□□□□ -0.21
GBX1-201ENST00000297537 ZNF706Q9Y5V0 76 aaPredicted RBP13.73□□□□□ -0.21
GBX1-201ENST00000297537 JOSD1Q15040 202 aaPredicted RBP13.71□□□□□ -0.21
GBX1-201ENST00000297537 COX8AP10176 69 aa13.7□□□□□ -0.22
GBX1-201ENST00000297537 DLEU1O43261 78 aa13.68□□□□□ -0.22
GBX1-201ENST00000297537 LINC00483Q53H64 154 aa13.68□□□□□ -0.22
GBX1-201ENST00000297537 HINT1P49773 126 aaPredicted RBP13.67□□□□□ -0.22
GBX1-201ENST00000297537 LRP2P98164 4655 aa13.66□□□□□ -0.22
GBX1-201ENST00000297537 C3orf22Q8N5N4 141 aa13.66□□□□□ -0.22
GBX1-201ENST00000297537 A6NDN8 102 aa13.63□□□□□ -0.23
GBX1-201ENST00000297537 C6orf99Q4VX62 202 aa13.63□□□□□ -0.23
GBX1-201ENST00000297537 PAM16Q9Y3D7 125 aa13.63□□□□□ -0.23
GBX1-201ENST00000297537 TRAV13-2A0A0B4J235 113 aa13.62□□□□□ -0.23
GBX1-201ENST00000297537 ELOF1P60002 83 aaKnown RBP13.62□□□□□ -0.23
GBX1-201ENST00000297537 SPATA45Q537H7 98 aa13.62□□□□□ -0.23
GBX1-201ENST00000297537 GAGE2AQ6NT46 116 aa13.62□□□□□ -0.23
GBX1-201ENST00000297537 C14orf144Q96I85 54 aa13.62□□□□□ -0.23
GBX1-201ENST00000297537 UBR4Q5T4S7 5183 aa13.62□□□□□ -0.23
GBX1-201ENST00000297537 TRBV7-6A0A0J9YX20 115 aa13.6□□□□□ -0.23
GBX1-201ENST00000297537 LINC00304Q8N9R0 145 aa13.6□□□□□ -0.23
GBX1-201ENST00000297537 VAMP8Q9BV40 100 aa13.6□□□□□ -0.23
GBX1-201ENST00000297537 TMA7Q9Y2S6 64 aaKnown RBP13.6□□□□□ -0.23
GBX1-201ENST00000297537 A4D1N5 150 aa13.59□□□□□ -0.23
GBX1-201ENST00000297537 TSPAN13O95857 204 aa13.59□□□□□ -0.23
GBX1-201ENST00000297537 DHRS4-AS1Q9P1J3 65 aa13.59□□□□□ -0.23
GBX1-201ENST00000297537 COX7BP24311 80 aa13.58□□□□□ -0.24
GBX1-201ENST00000297537 PYY3Q5JQD4 70 aa13.58□□□□□ -0.24
GBX1-201ENST00000297537 ST20-AS1Q8NBB2 130 aa13.57□□□□□ -0.24
GBX1-201ENST00000297537 CTAG1AP78358 180 aa13.56□□□□□ -0.24
GBX1-201ENST00000297537 HIST1H4GQ99525 98 aa13.56□□□□□ -0.24
GBX1-201ENST00000297537 HIGD1BQ9P298 99 aa13.56□□□□□ -0.24
GBX1-201ENST00000297537 LPAP08519 4548 aa13.55□□□□□ -0.24
GBX1-201ENST00000297537 SMIM11BQ8TCY0 68 aa13.55□□□□□ -0.24
GBX1-201ENST00000297537 SLC25A34Q6PIV7 304 aa13.54□□□□□ -0.24
GBX1-201ENST00000297537 A0A1B0GWB2 263 aa13.53□□□□□ -0.24
GBX1-201ENST00000297537 C2orf91Q6ZV80 131 aa13.52□□□□□ -0.25
GBX1-201ENST00000297537 SPRR1BP22528 89 aa13.51□□□□□ -0.25
GBX1-201ENST00000297537 SPAG11AQ6PDA7 123 aa13.5□□□□□ -0.25
GBX1-201ENST00000297537 Q8NBF4 154 aa13.49□□□□□ -0.25
GBX1-201ENST00000297537 IGLV9-49A0A0B4J1Y8 123 aa13.48□□□□□ -0.25
GBX1-201ENST00000297537 SSBP3-AS1Q7Z2R9 100 aa13.48□□□□□ -0.25
GBX1-201ENST00000297537 MOBPQ13875 183 aa13.47□□□□□ -0.25
GBX1-201ENST00000297537 PRR4Q16378 134 aa13.45□□□□□ -0.26
GBX1-201ENST00000297537 C12orf57Q99622 126 aa13.45□□□□□ -0.26
GBX1-201ENST00000297537 CFC1BP0CG36 223 aa13.43□□□□□ -0.26
GBX1-201ENST00000297537 CFC1P0CG37 223 aa13.43□□□□□ -0.26
GBX1-201ENST00000297537 TAL2Q16559 108 aa13.42□□□□□ -0.26
GBX1-201ENST00000297537 C4orf48Q5BLP8 95 aa13.42□□□□□ -0.26
GBX1-201ENST00000297537 LINC01547P58512 204 aaPredicted RBP13.41□□□□□ -0.26
GBX1-201ENST00000297537 VAMP3Q15836 100 aa13.41□□□□□ -0.26
GBX1-201ENST00000297537 SPINK1P00995 79 aa13.4□□□□□ -0.26
GBX1-201ENST00000297537 IGLV5-48A0A075B6I7 105 aa13.39□□□□□ -0.27
GBX1-201ENST00000297537 TEX49A0A1B0GTD5 131 aa13.39□□□□□ -0.27
GBX1-201ENST00000297537 CEND1Q8N111 149 aa13.39□□□□□ -0.27
GBX1-201ENST00000297537 NHP2Q9NX24 153 aaKnown RBP13.39□□□□□ -0.27
GBX1-201ENST00000297537 LINC00575Q6W349 94 aa13.38□□□□□ -0.27
GBX1-201ENST00000297537 RETNLBQ9BQ08 111 aa13.38□□□□□ -0.27
GBX1-201ENST00000297537 C9orf153Q5TBE3 101 aa13.37□□□□□ -0.27
GBX1-201ENST00000297537 DEFB105AQ8NG35 78 aa13.37□□□□□ -0.27
GBX1-201ENST00000297537 LAMTOR3Q9UHA4 124 aa13.37□□□□□ -0.27
GBX1-201ENST00000297537 A0A0B4J2C4 111 aa13.36□□□□□ -0.27
GBX1-201ENST00000297537 SMIM29Q86T20 159 aa13.35□□□□□ -0.27
GBX1-201ENST00000297537 RPS29P62273 56 aaKnown RBP13.34□□□□□ -0.27
GBX1-201ENST00000297537 SLC25A20O43772 301 aa13.33□□□□□ -0.28
GBX1-201ENST00000297537 BVES-AS1Q5T3Y7 98 aa13.33□□□□□ -0.28
GBX1-201ENST00000297537 RAB37Q96AX2 223 aa13.33□□□□□ -0.28
GBX1-201ENST00000297537 FXYD2P54710 66 aa13.32□□□□□ -0.28
GBX1-201ENST00000297537 Q8N377 158 aa13.32□□□□□ -0.28
GBX1-201ENST00000297537 Q1RN00 199 aa13.31□□□□□ -0.28
GBX1-201ENST00000297537 hADV29S1A0JD25 119 aa13.3□□□□□ -0.28
GBX1-201ENST00000297537 TMEM238LA0A1B0GVL6 79 aa13.29□□□□□ -0.28
GBX1-201ENST00000297537 A6NJY4 79 aa13.29□□□□□ -0.28
GBX1-201ENST00000297537 UQCR10Q9UDW1 63 aa13.29□□□□□ -0.28
GBX1-201ENST00000297537 H7C2G1 150 aa13.28□□□□□ -0.28
GBX1-201ENST00000297537 HSD52Q0P140 79 aa13.27□□□□□ -0.29
GBX1-201ENST00000297537 PRO1854Q9UHT4 67 aa13.27□□□□□ -0.29
GBX1-201ENST00000297537 Q6ZQY7 126 aa13.26□□□□□ -0.29
GBX1-201ENST00000297537 RNF213Q63HN8 5207 aa13.25□□□□□ -0.29
GBX1-201ENST00000297537 IGLV7-46A0A075B6I9 117 aa13.25□□□□□ -0.29
GBX1-201ENST00000297537 FP248Q71RG6 208 aaPredicted RBP13.24□□□□□ -0.29
GBX1-201ENST00000297537 PRO1933Q9H354 126 aa13.23□□□□□ -0.29
GBX1-201ENST00000297537 TPRXLQ17RH7 258 aa13.22□□□□□ -0.29
GBX1-201ENST00000297537 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms