RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 TRBV7-6A0A0J9YX20 115 aa9.21□□□□□ -0.94
HPS3-201ENST00000296051 CUBNO60494 3623 aa9.2□□□□□ -0.94
HPS3-201ENST00000296051 X6R8D5 127 aa9.2□□□□□ -0.94
HPS3-201ENST00000296051 Q6ZRU5 148 aa9.2□□□□□ -0.94
HPS3-201ENST00000296051 PRYO14603 147 aa9.19□□□□□ -0.94
HPS3-201ENST00000296051 C16orf90A8MZG2 172 aa9.19□□□□□ -0.94
HPS3-201ENST00000296051 REG3GQ6UW15 175 aa9.19□□□□□ -0.94
HPS3-201ENST00000296051 TM2D3Q9BRN9 247 aa9.18□□□□□ -0.94
HPS3-201ENST00000296051 LINC00208Q96KT6 92 aa9.17□□□□□ -0.94
HPS3-201ENST00000296051 ATP5EP56381 51 aaPredicted RBP9.17□□□□□ -0.94
HPS3-201ENST00000296051 K7EIL1 84 aa9.16□□□□□ -0.94
HPS3-201ENST00000296051 RPS28P62857 69 aaKnown RBP9.16□□□□□ -0.94
HPS3-201ENST00000296051 MRPL55Q7Z7F7 128 aaKnown RBP9.16□□□□□ -0.94
HPS3-201ENST00000296051 PRLHP81277 87 aa9.15□□□□□ -0.94
HPS3-201ENST00000296051 Q6ZQT0 140 aa9.14□□□□□ -0.95
HPS3-201ENST00000296051 C2orf48Q96LS8 159 aa9.14□□□□□ -0.95
HPS3-201ENST00000296051 NBDYA0A0U1RRE5 68 aa9.13□□□□□ -0.95
HPS3-201ENST00000296051 A0A096LNT2 108 aa9.13□□□□□ -0.95
HPS3-201ENST00000296051 Q8NAQ8 132 aa9.13□□□□□ -0.95
HPS3-201ENST00000296051 C6orf48Q9UBA6 75 aa9.12□□□□□ -0.95
HPS3-201ENST00000296051 FAM229AH3BQW9 127 aa9.12□□□□□ -0.95
HPS3-201ENST00000296051 NSD1Q96L73 2696 aaPredicted RBP9.11□□□□□ -0.95
HPS3-201ENST00000296051 A6NED7 52 aa9.11□□□□□ -0.95
HPS3-201ENST00000296051 LINC00588Q9Y4M8 146 aa9.11□□□□□ -0.95
HPS3-201ENST00000296051 SMIM29Q86T20 159 aa9.1□□□□□ -0.95
HPS3-201ENST00000296051 A0A087WSZ3 146 aa9.1□□□□□ -0.95
HPS3-201ENST00000296051 KIAA0087Q14695 138 aa9.1□□□□□ -0.95
HPS3-201ENST00000296051 CXCL6P80162 114 aa9.1□□□□□ -0.95
HPS3-201ENST00000296051 FAM104AQ969W3 186 aa9.1□□□□□ -0.95
HPS3-201ENST00000296051 KRTAP10-11P60412 298 aa9.09□□□□□ -0.95
HPS3-201ENST00000296051 PRO0628Q9UI54 55 aa9.09□□□□□ -0.95
HPS3-201ENST00000296051 C22orf24Q9Y442 160 aa9.09□□□□□ -0.95
HPS3-201ENST00000296051 PMAIP1Q13794 54 aa9.07□□□□□ -0.96
HPS3-201ENST00000296051 Q9BRP9 147 aa9.07□□□□□ -0.96
HPS3-201ENST00000296051 KRTAP10-3P60369 221 aa9.05□□□□□ -0.96
HPS3-201ENST00000296051 STAB2Q8WWQ8 2551 aa9.05□□□□□ -0.96
HPS3-201ENST00000296051 RTL8CO15255 209 aa9.05□□□□□ -0.96
HPS3-201ENST00000296051 KRTAP1-3Q8IUG1 177 aa9.05□□□□□ -0.96
HPS3-201ENST00000296051 H3BNG1 76 aa9.04□□□□□ -0.96
HPS3-201ENST00000296051 PCOTHQ58A44 107 aa9.04□□□□□ -0.96
HPS3-201ENST00000296051 DMBT1Q9UGM3 2413 aaPredicted RBP9.04□□□□□ -0.96
HPS3-201ENST00000296051 RETNLBQ9BQ08 111 aa9.04□□□□□ -0.96
HPS3-201ENST00000296051 PRR15LQ9BU68 103 aa9.03□□□□□ -0.96
HPS3-201ENST00000296051 IGHV6-1A0A0B4J1U7 121 aa9.02□□□□□ -0.96
HPS3-201ENST00000296051 LINC00336Q6ZUF6 198 aa9.02□□□□□ -0.96
HPS3-201ENST00000296051 GIG44P09565 113 aaPredicted RBP9.02□□□□□ -0.97
HPS3-201ENST00000296051 CR1P17927 2039 aa9.02□□□□□ -0.97
HPS3-201ENST00000296051 CYSTM1Q9H1C7 97 aa9.02□□□□□ -0.97
HPS3-201ENST00000296051 ZANQ9Y493 2812 aa9.02□□□□□ -0.97
HPS3-201ENST00000296051 F8WDY8 70 aa9.02□□□□□ -0.97
HPS3-201ENST00000296051 CELSR1Q9NYQ6 3014 aa9.01□□□□□ -0.97
HPS3-201ENST00000296051 J3QL48 77 aa9.01□□□□□ -0.97
HPS3-201ENST00000296051 CHTF8P0CG12 524 aa9.01□□□□□ -0.97
HPS3-201ENST00000296051 KRTAP1-1Q07627 177 aa9.01□□□□□ -0.97
HPS3-201ENST00000296051 DCHS2Q6V1P9 2916 aa9.01□□□□□ -0.97
HPS3-201ENST00000296051 SPACA4Q8TDM5 124 aa9□□□□□ -0.97
HPS3-201ENST00000296051 LOC110117498A0A087WWA1 95 aa9□□□□□ -0.97
HPS3-201ENST00000296051 ST20-AS1Q8NBB2 130 aa9□□□□□ -0.97
HPS3-201ENST00000296051 LINC00167Q96N53 147 aa9□□□□□ -0.97
HPS3-201ENST00000296051 K7ERS5 55 aa8.99□□□□□ -0.97
HPS3-201ENST00000296051 ELOF1P60002 83 aaKnown RBP8.99□□□□□ -0.97
HPS3-201ENST00000296051 ITPR2Q14571 2701 aa8.98□□□□□ -0.97
HPS3-201ENST00000296051 H7BZZ5 65 aa8.98□□□□□ -0.97
HPS3-201ENST00000296051 PHF5AQ7RTV0 110 aaKnown RBP8.98□□□□□ -0.97
HPS3-201ENST00000296051 HCG22E2RYF7 251 aa8.97□□□□□ -0.97
HPS3-201ENST00000296051 DNAH10OSP0CZ25 163 aa8.97□□□□□ -0.97
HPS3-201ENST00000296051 CSNK1G2-AS1Q8NCQ2 148 aa8.97□□□□□ -0.97
HPS3-201ENST00000296051 H0Y9P7 68 aa8.96□□□□□ -0.98
HPS3-201ENST00000296051 IGLV6-57P01721 117 aa8.96□□□□□ -0.98
HPS3-201ENST00000296051 UTP20O75691 2785 aaKnown RBP8.95□□□□□ -0.98
HPS3-201ENST00000296051 SPINK1P00995 79 aa8.95□□□□□ -0.98
HPS3-201ENST00000296051 MOBPQ13875 183 aa8.94□□□□□ -0.98
HPS3-201ENST00000296051 C19orf73Q9NVV2 129 aa8.94□□□□□ -0.98
HPS3-201ENST00000296051 A0A0G2JQZ4 141 aa8.94□□□□□ -0.98
HPS3-201ENST00000296051 A0A1W2PNN7 141 aa8.94□□□□□ -0.98
HPS3-201ENST00000296051 Q6ZRP5 223 aa8.94□□□□□ -0.98
HPS3-201ENST00000296051 BCE1O60756 84 aa8.93□□□□□ -0.98
HPS3-201ENST00000296051 SMR3BP02814 79 aaPredicted RBP8.93□□□□□ -0.98
HPS3-201ENST00000296051 LINC01600Q96MT4 127 aa8.93□□□□□ -0.98
HPS3-201ENST00000296051 VPREB1P12018 145 aa8.93□□□□□ -0.98
HPS3-201ENST00000296051 RPL37AP61513 92 aaKnown RBP8.92□□□□□ -0.98
HPS3-201ENST00000296051 CRYBG3Q68DQ2 2970 aa8.92□□□□□ -0.98
HPS3-201ENST00000296051 KLKP1Q107X0 134 aa8.91□□□□□ -0.98
HPS3-201ENST00000296051 LIMD2Q9BT23 127 aa8.91□□□□□ -0.98
HPS3-201ENST00000296051 CELSR2Q9HCU4 2923 aa8.91□□□□□ -0.98
HPS3-201ENST00000296051 FAM168BA1KXE4 195 aa8.9□□□□□ -0.98
HPS3-201ENST00000296051 Q8NBF4 154 aa8.89□□□□□ -0.99
HPS3-201ENST00000296051 C1orf64Q8NEQ6 169 aa8.89□□□□□ -0.99
HPS3-201ENST00000296051 TYMSOSQ8TAI1 123 aa8.89□□□□□ -0.99
HPS3-201ENST00000296051 FLG2Q5D862 2391 aaPredicted RBP8.88□□□□□ -0.99
HPS3-201ENST00000296051 K7EQZ3 153 aa8.88□□□□□ -0.99
HPS3-201ENST00000296051 PLA2G1BP04054 148 aaKnown RBP8.88□□□□□ -0.99
HPS3-201ENST00000296051 NF1P21359 2839 aa8.87□□□□□ -0.99
HPS3-201ENST00000296051 SERTAD4-AS1Q5TG53 156 aa8.87□□□□□ -0.99
HPS3-201ENST00000296051 LINC00476Q8WZB0 136 aa8.87□□□□□ -0.99
HPS3-201ENST00000296051 Q6ZRX8 168 aa8.86□□□□□ -0.99
HPS3-201ENST00000296051 FBN2P35556 2912 aa8.86□□□□□ -0.99
HPS3-201ENST00000296051 TRBV7-4A0A0J9YYF1 115 aa8.86□□□□□ -0.99
HPS3-201ENST00000296051 LINC00528Q8N1L1 170 aa8.86□□□□□ -0.99
HPS3-201ENST00000296051 OBSCN-AS1Q96MR7 158 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 108.1 ms