RNA–Protein interactions for RNA: ENST00000291547.9

PKNOX1-201, Transcript of PBX/knotted 1 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX1, Length 5,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-201ENST00000291547 LINC00476Q8WZB0 136 aa7.39□□□□□ -1.23
PKNOX1-201ENST00000291547 A8MUN3 132 aa7.38□□□□□ -1.23
PKNOX1-201ENST00000291547 SPEGQ15772 3267 aa7.37□□□□□ -1.23
PKNOX1-201ENST00000291547 TET2Q6N021 2002 aaPredicted RBP7.37□□□□□ -1.23
PKNOX1-201ENST00000291547 C16orf95Q9H693 158 aa7.36□□□□□ -1.23
PKNOX1-201ENST00000291547 SSBP3-AS1Q7Z2R9 100 aa7.36□□□□□ -1.23
PKNOX1-201ENST00000291547 RPL37AP61513 92 aaKnown RBP7.35□□□□□ -1.23
PKNOX1-201ENST00000291547 WDFY3Q8IZQ1 3526 aa7.34□□□□□ -1.23
PKNOX1-201ENST00000291547 Q6ZRX8 168 aa7.34□□□□□ -1.23
PKNOX1-201ENST00000291547 CYP4F30PQ9H0H9 118 aa7.34□□□□□ -1.23
PKNOX1-201ENST00000291547 DMDP11532 3685 aa7.34□□□□□ -1.23
PKNOX1-201ENST00000291547 TRBV7-4A0A0J9YYF1 115 aa7.34□□□□□ -1.24
PKNOX1-201ENST00000291547 USP24Q9UPU5 2620 aa7.33□□□□□ -1.24
PKNOX1-201ENST00000291547 ST20-AS1Q8NBB2 130 aa7.33□□□□□ -1.24
PKNOX1-201ENST00000291547 LINC00313P59037 77 aa7.32□□□□□ -1.24
PKNOX1-201ENST00000291547 EIF4EBP3O60516 100 aaPredicted RBP7.32□□□□□ -1.24
PKNOX1-201ENST00000291547 DSPP15924 2871 aaKnown RBP7.32□□□□□ -1.24
PKNOX1-201ENST00000291547 COA5Q86WW8 74 aa7.31□□□□□ -1.24
PKNOX1-201ENST00000291547 LOC101927531A0A1B0GV80 90 aa7.3□□□□□ -1.24
PKNOX1-201ENST00000291547 PHF5AQ7RTV0 110 aaKnown RBP7.3□□□□□ -1.24
PKNOX1-201ENST00000291547 UQCR11O14957 56 aa7.29□□□□□ -1.24
PKNOX1-201ENST00000291547 EPM2AB3EWF7 344 aa7.29□□□□□ -1.24
PKNOX1-201ENST00000291547 OXTP01178 125 aa7.29□□□□□ -1.24
PKNOX1-201ENST00000291547 CFAP54Q96N23 3096 aa7.29□□□□□ -1.24
PKNOX1-201ENST00000291547 OBSCN-AS1Q96MR7 158 aa7.28□□□□□ -1.24
PKNOX1-201ENST00000291547 LCA10Q71F78 164 aa7.28□□□□□ -1.24
PKNOX1-201ENST00000291547 Q1T7F1 81 aa7.28□□□□□ -1.24
PKNOX1-201ENST00000291547 K7EQZ3 153 aa7.27□□□□□ -1.24
PKNOX1-201ENST00000291547 FRYLO94915 3013 aa7.27□□□□□ -1.25
PKNOX1-201ENST00000291547 HECTD1Q9ULT8 2610 aa7.27□□□□□ -1.25
PKNOX1-201ENST00000291547 A0A096LNT2 108 aa7.27□□□□□ -1.25
PKNOX1-201ENST00000291547 FP248Q71RG6 208 aaPredicted RBP7.27□□□□□ -1.25
PKNOX1-201ENST00000291547 MDFIQ99750 246 aa7.26□□□□□ -1.25
PKNOX1-201ENST00000291547 FAM229AH3BQW9 127 aa7.26□□□□□ -1.25
PKNOX1-201ENST00000291547 A8MWP4 228 aa7.25□□□□□ -1.25
PKNOX1-201ENST00000291547 CYSTM1Q9H1C7 97 aa7.25□□□□□ -1.25
PKNOX1-201ENST00000291547 CHTF8P0CG12 524 aa7.24□□□□□ -1.25
PKNOX1-201ENST00000291547 MRPL34Q9BQ48 92 aaKnown RBP7.24□□□□□ -1.25
PKNOX1-201ENST00000291547 Q96NJ1 140 aa7.24□□□□□ -1.25
PKNOX1-201ENST00000291547 CRIPTQ9P021 101 aa7.23□□□□□ -1.25
PKNOX1-201ENST00000291547 IGSF10Q6WRI0 2623 aa7.23□□□□□ -1.25
PKNOX1-201ENST00000291547 TYMSOSQ8TAI1 123 aa7.23□□□□□ -1.25
PKNOX1-201ENST00000291547 RBM12B-AS1Q9P1G2 102 aa7.22□□□□□ -1.25
PKNOX1-201ENST00000291547 FLNBO75369 2602 aaKnown RBP7.22□□□□□ -1.25
PKNOX1-201ENST00000291547 MIR22HGQ0VDD5 57 aa7.22□□□□□ -1.25
PKNOX1-201ENST00000291547 C16orf90A8MZG2 172 aa7.22□□□□□ -1.25
PKNOX1-201ENST00000291547 H3BNG1 76 aa7.21□□□□□ -1.25
PKNOX1-201ENST00000291547 IGLV6-57P01721 117 aa7.21□□□□□ -1.25
PKNOX1-201ENST00000291547 Q6ZRP5 223 aa7.21□□□□□ -1.26
PKNOX1-201ENST00000291547 DMXL1Q9Y485 3027 aa7.2□□□□□ -1.26
PKNOX1-201ENST00000291547 KRTAP1-3Q8IUG1 177 aa7.2□□□□□ -1.26
PKNOX1-201ENST00000291547 APLNQ9ULZ1 77 aa7.2□□□□□ -1.26
PKNOX1-201ENST00000291547 GVQW2A0A096LPI5 108 aaPredicted RBP7.19□□□□□ -1.26
PKNOX1-201ENST00000291547 HELZ2Q9BYK8 2649 aaKnown RBP7.19□□□□□ -1.26
PKNOX1-201ENST00000291547 RTL8CO15255 209 aa7.18□□□□□ -1.26
PKNOX1-201ENST00000291547 CENPEQ02224 2701 aa7.17□□□□□ -1.26
PKNOX1-201ENST00000291547 CELSR3Q9NYQ7 3312 aa7.17□□□□□ -1.26
PKNOX1-201ENST00000291547 CFAP46Q8IYW2 2715 aa7.16□□□□□ -1.26
PKNOX1-201ENST00000291547 DMXL2Q8TDJ6 3036 aa7.16□□□□□ -1.26
PKNOX1-201ENST00000291547 FRYQ5TBA9 3013 aa7.16□□□□□ -1.26
PKNOX1-201ENST00000291547 FAM168BA1KXE4 195 aa7.16□□□□□ -1.26
PKNOX1-201ENST00000291547 KLK9Q2XQG4 91 aa7.16□□□□□ -1.26
PKNOX1-201ENST00000291547 LINC00528Q8N1L1 170 aa7.15□□□□□ -1.26
PKNOX1-201ENST00000291547 C8orf17Q9NRJ1 99 aa7.15□□□□□ -1.27
PKNOX1-201ENST00000291547 LINC00588Q9Y4M8 146 aa7.15□□□□□ -1.27
PKNOX1-201ENST00000291547 NBDYA0A0U1RRE5 68 aa7.14□□□□□ -1.27
PKNOX1-201ENST00000291547 IGFL1Q6UW32 110 aa7.14□□□□□ -1.27
PKNOX1-201ENST00000291547 C9orf129Q5T035 196 aaKnown RBP7.13□□□□□ -1.27
PKNOX1-201ENST00000291547 KCNQ1DNQ9H478 68 aa7.13□□□□□ -1.27
PKNOX1-201ENST00000291547 IGLV1-50A0A075B6I6 118 aa7.12□□□□□ -1.27
PKNOX1-201ENST00000291547 Q8NAQ8 132 aa7.12□□□□□ -1.27
PKNOX1-201ENST00000291547 DSCR10P59022 87 aa7.12□□□□□ -1.27
PKNOX1-201ENST00000291547 FREM2Q5SZK8 3169 aa7.12□□□□□ -1.27
PKNOX1-201ENST00000291547 CDC42SE1Q9NRR8 79 aa7.12□□□□□ -1.27
PKNOX1-201ENST00000291547 FLNAP21333 2647 aaKnown RBP7.11□□□□□ -1.27
PKNOX1-201ENST00000291547 H3BS24 57 aa7.1□□□□□ -1.27
PKNOX1-201ENST00000291547 KRTAP1-1Q07627 177 aa7.1□□□□□ -1.27
PKNOX1-201ENST00000291547 MGAM2Q2M2H8 2515 aa7.1□□□□□ -1.27
PKNOX1-201ENST00000291547 ITPR3Q14573 2671 aa7.1□□□□□ -1.27
PKNOX1-201ENST00000291547 BOD1L1Q8NFC6 3051 aa7.1□□□□□ -1.27
PKNOX1-201ENST00000291547 ZNF575Q86XF7 245 aa7.09□□□□□ -1.27
PKNOX1-201ENST00000291547 A0A1B0GVX0 72 aa7.09□□□□□ -1.27
PKNOX1-201ENST00000291547 Q8N377 158 aa7.09□□□□□ -1.27
PKNOX1-201ENST00000291547 A0A0G2JQZ4 141 aa7.08□□□□□ -1.28
PKNOX1-201ENST00000291547 A0A1W2PNN7 141 aa7.08□□□□□ -1.28
PKNOX1-201ENST00000291547 KRTAP24-1Q3LI83 254 aa7.08□□□□□ -1.28
PKNOX1-201ENST00000291547 DNAH10OSP0CZ25 163 aa7.08□□□□□ -1.28
PKNOX1-201ENST00000291547 FAM229BQ4G0N7 80 aa7.07□□□□□ -1.28
PKNOX1-201ENST00000291547 SPANXA2-OT1Q8N9U9 137 aa7.07□□□□□ -1.28
PKNOX1-201ENST00000291547 CHD6Q8TD26 2715 aa7.06□□□□□ -1.28
PKNOX1-201ENST00000291547 OCR1Q9BZK8 76 aa7.05□□□□□ -1.28
PKNOX1-201ENST00000291547 ATRQ13535 2644 aa7.05□□□□□ -1.28
PKNOX1-201ENST00000291547 Q75L30 129 aa7.04□□□□□ -1.28
PKNOX1-201ENST00000291547 COX6B2Q6YFQ2 88 aa7.03□□□□□ -1.28
PKNOX1-201ENST00000291547 A0A0D9SG42 100 aa7.03□□□□□ -1.28
PKNOX1-201ENST00000291547 FAM104AQ969W3 186 aa7.02□□□□□ -1.29
PKNOX1-201ENST00000291547 CR1P17927 2039 aa7.02□□□□□ -1.29
PKNOX1-201ENST00000291547 FLNCQ14315 2725 aa7.02□□□□□ -1.29
PKNOX1-201ENST00000291547 LUZP6Q538Z0 58 aa7.01□□□□□ -1.29
PKNOX1-201ENST00000291547 LINC01554Q52M75 96 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms