RNA–Protein interactions for RNA: ENST00000289272.2

PCDHA13-201, Transcript of protocadherin alpha 13, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA13, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-201ENST00000289272 SPINK1P00995 79 aa11.65□□□□□ -0.54
PCDHA13-201ENST00000289272 RPL37AP61513 92 aaKnown RBP11.63□□□□□ -0.55
PCDHA13-201ENST00000289272 RANBP2P49792 3224 aaKnown RBP11.63□□□□□ -0.55
PCDHA13-201ENST00000289272 FASNP49327 2511 aaKnown RBP11.63□□□□□ -0.55
PCDHA13-201ENST00000289272 LINC00612Q8N6U2 182 aa11.63□□□□□ -0.55
PCDHA13-201ENST00000289272 Q5XG85 94 aa11.63□□□□□ -0.55
PCDHA13-201ENST00000289272 DNAH10OSP0CZ25 163 aa11.62□□□□□ -0.55
PCDHA13-201ENST00000289272 EPM2AB3EWF7 344 aa11.62□□□□□ -0.55
PCDHA13-201ENST00000289272 TLX1NBP0CAT3 122 aa11.61□□□□□ -0.55
PCDHA13-201ENST00000289272 ZNF575Q86XF7 245 aa11.61□□□□□ -0.55
PCDHA13-201ENST00000289272 OCR1Q9BZK8 76 aa11.61□□□□□ -0.55
PCDHA13-201ENST00000289272 C9orf129Q5T035 196 aaKnown RBP11.61□□□□□ -0.55
PCDHA13-201ENST00000289272 IGKV2D-30A0A075B6S6 120 aa11.6□□□□□ -0.55
PCDHA13-201ENST00000289272 IGKV2-30P06310 120 aa11.6□□□□□ -0.55
PCDHA13-201ENST00000289272 Q8N377 158 aa11.6□□□□□ -0.55
PCDHA13-201ENST00000289272 WWC2-AS2Q96NR7 200 aa11.6□□□□□ -0.55
PCDHA13-201ENST00000289272 LINC00588Q9Y4M8 146 aa11.6□□□□□ -0.55
PCDHA13-201ENST00000289272 GIG44P09565 113 aaPredicted RBP11.59□□□□□ -0.55
PCDHA13-201ENST00000289272 IGFL1Q6UW32 110 aa11.58□□□□□ -0.56
PCDHA13-201ENST00000289272 LINC00313P59037 77 aa11.58□□□□□ -0.56
PCDHA13-201ENST00000289272 C19orf73Q9NVV2 129 aa11.57□□□□□ -0.56
PCDHA13-201ENST00000289272 IGLV5-48A0A075B6I7 105 aa11.57□□□□□ -0.56
PCDHA13-201ENST00000289272 MIR22HGQ0VDD5 57 aa11.55□□□□□ -0.56
PCDHA13-201ENST00000289272 C8orf17Q9NRJ1 99 aa11.55□□□□□ -0.56
PCDHA13-201ENST00000289272 RTL8CO15255 209 aa11.54□□□□□ -0.56
PCDHA13-201ENST00000289272 A0A0C4DFX4 3053 aa11.51□□□□□ -0.57
PCDHA13-201ENST00000289272 A0A1B0GVX0 72 aa11.49□□□□□ -0.57
PCDHA13-201ENST00000289272 MKI67P46013 3256 aaKnown RBP11.48□□□□□ -0.57
PCDHA13-201ENST00000289272 Q75L30 129 aa11.48□□□□□ -0.57
PCDHA13-201ENST00000289272 PHF5AQ7RTV0 110 aaKnown RBP11.48□□□□□ -0.57
PCDHA13-201ENST00000289272 IGLV5-37A0A075B6J1 123 aa11.46□□□□□ -0.57
PCDHA13-201ENST00000289272 A0A1W2PNM2 257 aa11.46□□□□□ -0.57
PCDHA13-201ENST00000289272 C15orf56Q8N910 161 aa11.46□□□□□ -0.57
PCDHA13-201ENST00000289272 SPACA4Q8TDM5 124 aa11.45□□□□□ -0.58
PCDHA13-201ENST00000289272 K7EIL1 84 aa11.45□□□□□ -0.58
PCDHA13-201ENST00000289272 LAMA3Q16787 3333 aa11.44□□□□□ -0.58
PCDHA13-201ENST00000289272 SPRR4Q96PI1 79 aa11.43□□□□□ -0.58
PCDHA13-201ENST00000289272 KRTAP10-11P60412 298 aa11.42□□□□□ -0.58
PCDHA13-201ENST00000289272 KRTAP1-3Q8IUG1 177 aa11.42□□□□□ -0.58
PCDHA13-201ENST00000289272 KRTAP10-3P60369 221 aa11.42□□□□□ -0.58
PCDHA13-201ENST00000289272 FAM104AQ969W3 186 aa11.42□□□□□ -0.58
PCDHA13-201ENST00000289272 FP248Q71RG6 208 aaPredicted RBP11.41□□□□□ -0.58
PCDHA13-201ENST00000289272 F8P00451 2351 aa11.4□□□□□ -0.58
PCDHA13-201ENST00000289272 SPINT4Q6UDR6 99 aa11.4□□□□□ -0.58
PCDHA13-201ENST00000289272 IGLV7-46A0A075B6I9 117 aa11.38□□□□□ -0.59
PCDHA13-201ENST00000289272 FAM168BA1KXE4 195 aa11.37□□□□□ -0.59
PCDHA13-201ENST00000289272 PLA2G1BP04054 148 aaKnown RBP11.36□□□□□ -0.59
PCDHA13-201ENST00000289272 BRCA2P51587 3418 aa11.36□□□□□ -0.59
PCDHA13-201ENST00000289272 SSBP3-AS1Q7Z2R9 100 aa11.36□□□□□ -0.59
PCDHA13-201ENST00000289272 RBM12B-AS1Q9P1G2 102 aa11.35□□□□□ -0.59
PCDHA13-201ENST00000289272 TYMSOSQ8TAI1 123 aa11.35□□□□□ -0.59
PCDHA13-201ENST00000289272 KRTAP1-1Q07627 177 aa11.34□□□□□ -0.59
PCDHA13-201ENST00000289272 LINC01558Q9Y6Z2 57 aa11.33□□□□□ -0.6
PCDHA13-201ENST00000289272 LAMA2P24043 3122 aaKnown RBP11.32□□□□□ -0.6
PCDHA13-201ENST00000289272 DSCR10P59022 87 aa11.3□□□□□ -0.6
PCDHA13-201ENST00000289272 CYSTM1Q9H1C7 97 aa11.29□□□□□ -0.6
PCDHA13-201ENST00000289272 HECTD1Q9ULT8 2610 aa11.29□□□□□ -0.6
PCDHA13-201ENST00000289272 CFAP54Q96N23 3096 aa11.29□□□□□ -0.6
PCDHA13-201ENST00000289272 FLNAP21333 2647 aaKnown RBP11.29□□□□□ -0.6
PCDHA13-201ENST00000289272 CHTF8P0CG12 524 aa11.29□□□□□ -0.6
PCDHA13-201ENST00000289272 Q8N9P0 234 aaPredicted RBP11.27□□□□□ -0.6
PCDHA13-201ENST00000289272 IGLV8-61A0A075B6I0 122 aa11.26□□□□□ -0.61
PCDHA13-201ENST00000289272 ZNF292O60281 2723 aa11.25□□□□□ -0.61
PCDHA13-201ENST00000289272 CRIPTQ9P021 101 aa11.23□□□□□ -0.61
PCDHA13-201ENST00000289272 MGAQ8IWI9 3026 aa11.23□□□□□ -0.61
PCDHA13-201ENST00000289272 C9orf163Q8N9P6 203 aa11.23□□□□□ -0.61
PCDHA13-201ENST00000289272 CNBPP62633 177 aaKnown RBP11.23□□□□□ -0.61
PCDHA13-201ENST00000289272 FAM229BQ4G0N7 80 aa11.22□□□□□ -0.61
PCDHA13-201ENST00000289272 Q96NJ1 140 aa11.22□□□□□ -0.61
PCDHA13-201ENST00000289272 A0A087WTM6 91 aa11.21□□□□□ -0.61
PCDHA13-201ENST00000289272 ZNF861PO60384 105 aa11.21□□□□□ -0.62
PCDHA13-201ENST00000289272 UNC80Q8N2C7 3258 aa11.2□□□□□ -0.62
PCDHA13-201ENST00000289272 OXTP01178 125 aa11.2□□□□□ -0.62
PCDHA13-201ENST00000289272 ITPR3Q14573 2671 aa11.2□□□□□ -0.62
PCDHA13-201ENST00000289272 LINC01554Q52M75 96 aa11.19□□□□□ -0.62
PCDHA13-201ENST00000289272 FLNBO75369 2602 aaKnown RBP11.19□□□□□ -0.62
PCDHA13-201ENST00000289272 APLNQ9ULZ1 77 aa11.18□□□□□ -0.62
PCDHA13-201ENST00000289272 Q5VV11 94 aa11.18□□□□□ -0.62
PCDHA13-201ENST00000289272 ASB16-AS1Q495Z4 193 aa11.16□□□□□ -0.62
PCDHA13-201ENST00000289272 PRUNE2Q8WUY3 3088 aa11.16□□□□□ -0.62
PCDHA13-201ENST00000289272 CENPEQ02224 2701 aa11.15□□□□□ -0.62
PCDHA13-201ENST00000289272 USP24Q9UPU5 2620 aa11.1□□□□□ -0.63
PCDHA13-201ENST00000289272 SPRR1AP35321 89 aa11.09□□□□□ -0.63
PCDHA13-201ENST00000289272 WDFY4Q6ZS81 3184 aa11.08□□□□□ -0.63
PCDHA13-201ENST00000289272 J3QL48 77 aa11.08□□□□□ -0.64
PCDHA13-201ENST00000289272 CASC10Q5T4H9 136 aa11.07□□□□□ -0.64
PCDHA13-201ENST00000289272 TRIOO75962 3097 aa11.07□□□□□ -0.64
PCDHA13-201ENST00000289272 LINC00304Q8N9R0 145 aa11.07□□□□□ -0.64
PCDHA13-201ENST00000289272 ATRQ13535 2644 aa11.06□□□□□ -0.64
PCDHA13-201ENST00000289272 A0A0G2JQZ4 141 aa11.05□□□□□ -0.64
PCDHA13-201ENST00000289272 A0A1W2PNN7 141 aa11.05□□□□□ -0.64
PCDHA13-201ENST00000289272 CR1P17927 2039 aa11.05□□□□□ -0.64
PCDHA13-201ENST00000289272 MMP24-AS1A0A0U1RRL7 71 aa11.04□□□□□ -0.64
PCDHA13-201ENST00000289272 CFAP46Q8IYW2 2715 aa11.03□□□□□ -0.64
PCDHA13-201ENST00000289272 CDH23Q9H251 3354 aa11.03□□□□□ -0.64
PCDHA13-201ENST00000289272 IGLV7-43P04211 117 aa11.03□□□□□ -0.64
PCDHA13-201ENST00000289272 PRR26Q8N8Z3 221 aa11.03□□□□□ -0.64
PCDHA13-201ENST00000289272 AKAP13Q12802 2813 aa11.03□□□□□ -0.64
PCDHA13-201ENST00000289272 MGAM2Q2M2H8 2515 aa11.02□□□□□ -0.64
PCDHA13-201ENST00000289272 SPRR1BP22528 89 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 189 ms