RNA–Protein interactions for RNA: ENST00000287814.4

TIMP4-201, Transcript of TIMP metallopeptidase inhibitor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP4, Length 1,650 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4-201ENST00000287814 KRTAP10-8P60410 259 aa11.93□□□□□ -0.5
TIMP4-201ENST00000287814 IGLV6-57P01721 117 aa11.92□□□□□ -0.5
TIMP4-201ENST00000287814 KRTAP4-16G5E9R7 235 aaPredicted RBP11.91□□□□□ -0.5
TIMP4-201ENST00000287814 UQCR10Q9UDW1 63 aa11.91□□□□□ -0.5
TIMP4-201ENST00000287814 COX8AP10176 69 aa11.91□□□□□ -0.5
TIMP4-201ENST00000287814 S100A7L2Q5SY68 101 aa11.9□□□□□ -0.5
TIMP4-201ENST00000287814 SLC25A34Q6PIV7 304 aa11.9□□□□□ -0.5
TIMP4-201ENST00000287814 MUSTN1Q8IVN3 82 aa11.9□□□□□ -0.5
TIMP4-201ENST00000287814 PRR26Q8N8Z3 221 aa11.89□□□□□ -0.51
TIMP4-201ENST00000287814 IFITM1P13164 125 aa11.88□□□□□ -0.51
TIMP4-201ENST00000287814 Q6ZVH6 145 aa11.88□□□□□ -0.51
TIMP4-201ENST00000287814 LINC00337Q8N6G1 96 aa11.88□□□□□ -0.51
TIMP4-201ENST00000287814 CTAG1AP78358 180 aa11.85□□□□□ -0.51
TIMP4-201ENST00000287814 HIGD2AQ9BW72 106 aa11.85□□□□□ -0.51
TIMP4-201ENST00000287814 PPDPFQ9H3Y8 114 aa11.85□□□□□ -0.51
TIMP4-201ENST00000287814 ETDCA0A1B0GVM5 59 aa11.84□□□□□ -0.51
TIMP4-201ENST00000287814 OR13C6PQ8NH95 151 aa11.84□□□□□ -0.51
TIMP4-201ENST00000287814 ANAPC11Q9NYG5 84 aa11.84□□□□□ -0.51
TIMP4-201ENST00000287814 TRAV23DV6A0A075B6W5 121 aa11.84□□□□□ -0.51
TIMP4-201ENST00000287814 B5MCH6 92 aa11.83□□□□□ -0.52
TIMP4-201ENST00000287814 COPS9Q8WXC6 57 aa11.83□□□□□ -0.52
TIMP4-201ENST00000287814 DLEU1O43261 78 aa11.82□□□□□ -0.52
TIMP4-201ENST00000287814 ZNF73O43830 326 aaPredicted RBP11.81□□□□□ -0.52
TIMP4-201ENST00000287814 SMCR5Q8TEV8 140 aa11.81□□□□□ -0.52
TIMP4-201ENST00000287814 A0A087X002 238 aa11.8□□□□□ -0.52
TIMP4-201ENST00000287814 C2orf91Q6ZV80 131 aa11.8□□□□□ -0.52
TIMP4-201ENST00000287814 Q9BRP9 147 aa11.78□□□□□ -0.52
TIMP4-201ENST00000287814 Q6ZRX8 168 aa11.78□□□□□ -0.52
TIMP4-201ENST00000287814 ERC2-IT1O76042 136 aa11.77□□□□□ -0.53
TIMP4-201ENST00000287814 A4D1N5 150 aa11.75□□□□□ -0.53
TIMP4-201ENST00000287814 A6NDN8 102 aa11.75□□□□□ -0.53
TIMP4-201ENST00000287814 SPRR4Q96PI1 79 aa11.75□□□□□ -0.53
TIMP4-201ENST00000287814 CRYGAP11844 174 aa11.74□□□□□ -0.53
TIMP4-201ENST00000287814 KRTAP13-2Q52LG2 175 aa11.74□□□□□ -0.53
TIMP4-201ENST00000287814 HIST1H4GQ99525 98 aa11.74□□□□□ -0.53
TIMP4-201ENST00000287814 CBY1Q9Y3M2 126 aa11.74□□□□□ -0.53
TIMP4-201ENST00000287814 RPL13AP40429 203 aaKnown RBP11.73□□□□□ -0.53
TIMP4-201ENST00000287814 HIGD1BQ9P298 99 aa11.73□□□□□ -0.53
TIMP4-201ENST00000287814 C6orf99Q4VX62 202 aa11.72□□□□□ -0.53
TIMP4-201ENST00000287814 FAM229BQ4G0N7 80 aa11.71□□□□□ -0.53
TIMP4-201ENST00000287814 TRAV13-2A0A0B4J235 113 aa11.7□□□□□ -0.54
TIMP4-201ENST00000287814 HINT1P49773 126 aaPredicted RBP11.69□□□□□ -0.54
TIMP4-201ENST00000287814 HMCN2Q8NDA2 5059 aa11.69□□□□□ -0.54
TIMP4-201ENST00000287814 TYMSOSQ8TAI1 123 aa11.68□□□□□ -0.54
TIMP4-201ENST00000287814 SNHG12Q9BXW3 62 aa11.68□□□□□ -0.54
TIMP4-201ENST00000287814 ZNF706Q9Y5V0 76 aaPredicted RBP11.68□□□□□ -0.54
TIMP4-201ENST00000287814 ELOF1P60002 83 aaKnown RBP11.67□□□□□ -0.54
TIMP4-201ENST00000287814 HSD52Q0P140 79 aa11.67□□□□□ -0.54
TIMP4-201ENST00000287814 BATFQ16520 125 aa11.67□□□□□ -0.54
TIMP4-201ENST00000287814 SMIM11BQ8TCY0 68 aa11.67□□□□□ -0.54
TIMP4-201ENST00000287814 M0R143 59 aa11.66□□□□□ -0.54
TIMP4-201ENST00000287814 COX7BP24311 80 aa11.66□□□□□ -0.54
TIMP4-201ENST00000287814 GAGE2AQ6NT46 116 aa11.65□□□□□ -0.54
TIMP4-201ENST00000287814 C3orf22Q8N5N4 141 aa11.65□□□□□ -0.54
TIMP4-201ENST00000287814 LINC00483Q53H64 154 aa11.65□□□□□ -0.55
TIMP4-201ENST00000287814 ST20-AS1Q8NBB2 130 aa11.65□□□□□ -0.55
TIMP4-201ENST00000287814 BVES-AS1Q5T3Y7 98 aa11.64□□□□□ -0.55
TIMP4-201ENST00000287814 TRBV7-6A0A0J9YX20 115 aa11.62□□□□□ -0.55
TIMP4-201ENST00000287814 TAL2Q16559 108 aa11.62□□□□□ -0.55
TIMP4-201ENST00000287814 CFC1BP0CG36 223 aa11.62□□□□□ -0.55
TIMP4-201ENST00000287814 CFC1P0CG37 223 aa11.62□□□□□ -0.55
TIMP4-201ENST00000287814 CEND1Q8N111 149 aa11.62□□□□□ -0.55
TIMP4-201ENST00000287814 DHRS4-AS1Q9P1J3 65 aa11.62□□□□□ -0.55
TIMP4-201ENST00000287814 A0A1B0GWB2 263 aa11.6□□□□□ -0.55
TIMP4-201ENST00000287814 FXYD2P54710 66 aa11.59□□□□□ -0.55
TIMP4-201ENST00000287814 TSPAN13O95857 204 aa11.55□□□□□ -0.56
TIMP4-201ENST00000287814 A0A0B4J2C4 111 aa11.54□□□□□ -0.56
TIMP4-201ENST00000287814 LINC00304Q8N9R0 145 aa11.54□□□□□ -0.56
TIMP4-201ENST00000287814 RAB37Q96AX2 223 aa11.53□□□□□ -0.56
TIMP4-201ENST00000287814 IGLV9-49A0A0B4J1Y8 123 aa11.52□□□□□ -0.56
TIMP4-201ENST00000287814 H7C2G1 150 aa11.52□□□□□ -0.56
TIMP4-201ENST00000287814 SPRR1BP22528 89 aa11.52□□□□□ -0.56
TIMP4-201ENST00000287814 COL5A1-AS1Q5SY13 56 aa11.52□□□□□ -0.56
TIMP4-201ENST00000287814 NHP2Q9NX24 153 aaKnown RBP11.52□□□□□ -0.57
TIMP4-201ENST00000287814 A0A1B0GV90 55 aa11.51□□□□□ -0.57
TIMP4-201ENST00000287814 VAMP3Q15836 100 aa11.51□□□□□ -0.57
TIMP4-201ENST00000287814 MOBPQ13875 183 aa11.5□□□□□ -0.57
TIMP4-201ENST00000287814 DEFB105AQ8NG35 78 aa11.5□□□□□ -0.57
TIMP4-201ENST00000287814 TMEM238LA0A1B0GVL6 79 aa11.49□□□□□ -0.57
TIMP4-201ENST00000287814 A6NJY4 79 aa11.49□□□□□ -0.57
TIMP4-201ENST00000287814 LINC01547P58512 204 aaPredicted RBP11.49□□□□□ -0.57
TIMP4-201ENST00000287814 LINC00575Q6W349 94 aa11.49□□□□□ -0.57
TIMP4-201ENST00000287814 Q8NBF4 154 aa11.49□□□□□ -0.57
TIMP4-201ENST00000287814 K7ERJ3 54 aa11.47□□□□□ -0.57
TIMP4-201ENST00000287814 PRO1854Q9UHT4 67 aa11.47□□□□□ -0.57
TIMP4-201ENST00000287814 IGLV5-48A0A075B6I7 105 aa11.46□□□□□ -0.58
TIMP4-201ENST00000287814 SSBP3-AS1Q7Z2R9 100 aa11.46□□□□□ -0.58
TIMP4-201ENST00000287814 TEX49A0A1B0GTD5 131 aa11.45□□□□□ -0.58
TIMP4-201ENST00000287814 TAX1BP3O14907 124 aa11.44□□□□□ -0.58
TIMP4-201ENST00000287814 SLC25A20O43772 301 aa11.44□□□□□ -0.58
TIMP4-201ENST00000287814 SMIM29Q86T20 159 aa11.44□□□□□ -0.58
TIMP4-201ENST00000287814 hADV29S1A0JD25 119 aa11.43□□□□□ -0.58
TIMP4-201ENST00000287814 Q1RN00 199 aa11.43□□□□□ -0.58
TIMP4-201ENST00000287814 C9orf153Q5TBE3 101 aa11.43□□□□□ -0.58
TIMP4-201ENST00000287814 Q8N377 158 aa11.43□□□□□ -0.58
TIMP4-201ENST00000287814 SPAG11AQ6PDA7 123 aa11.42□□□□□ -0.58
TIMP4-201ENST00000287814 LAMTOR3Q9UHA4 124 aa11.42□□□□□ -0.58
TIMP4-201ENST00000287814 LRP2P98164 4655 aa11.41□□□□□ -0.58
TIMP4-201ENST00000287814 C4orf48Q5BLP8 95 aa11.4□□□□□ -0.58
TIMP4-201ENST00000287814 Q6ZQY7 126 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms