RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 LOC110117498A0A087WWA1 95 aa9□□□□□ -0.97
SCAF4-201ENST00000286835 IGLV6-57P01721 117 aa9□□□□□ -0.97
SCAF4-201ENST00000286835 TMEM254Q8TBM7 123 aa8.99□□□□□ -0.97
SCAF4-201ENST00000286835 SYCNQ0VAF6 134 aa8.99□□□□□ -0.97
SCAF4-201ENST00000286835 H7BZZ5 65 aa8.98□□□□□ -0.97
SCAF4-201ENST00000286835 CXCL6P80162 114 aa8.98□□□□□ -0.97
SCAF4-201ENST00000286835 SMIM26A0A096LP01 95 aa8.97□□□□□ -0.97
SCAF4-201ENST00000286835 IGKV2-24A0A0C4DH68 120 aa8.97□□□□□ -0.97
SCAF4-201ENST00000286835 TRBV7-6A0A0J9YX20 115 aa8.96□□□□□ -0.97
SCAF4-201ENST00000286835 EGFEM1PQ0D2K5 195 aa8.96□□□□□ -0.97
SCAF4-201ENST00000286835 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.95□□□□□ -0.98
SCAF4-201ENST00000286835 LINC00474Q9P2X8 69 aa8.95□□□□□ -0.98
SCAF4-201ENST00000286835 LINC00612Q8N6U2 182 aa8.95□□□□□ -0.98
SCAF4-201ENST00000286835 ELOF1P60002 83 aaKnown RBP8.95□□□□□ -0.98
SCAF4-201ENST00000286835 Q8NAQ8 132 aa8.94□□□□□ -0.98
SCAF4-201ENST00000286835 HIGD2AQ9BW72 106 aa8.94□□□□□ -0.98
SCAF4-201ENST00000286835 NDUFC1O43677 76 aa8.94□□□□□ -0.98
SCAF4-201ENST00000286835 DEFB116Q30KQ4 102 aa8.92□□□□□ -0.98
SCAF4-201ENST00000286835 VPREB1P12018 145 aa8.92□□□□□ -0.98
SCAF4-201ENST00000286835 PRYO14603 147 aa8.92□□□□□ -0.98
SCAF4-201ENST00000286835 Q6ZRP5 223 aa8.9□□□□□ -0.98
SCAF4-201ENST00000286835 C1orf137Q5JT78 98 aa8.9□□□□□ -0.98
SCAF4-201ENST00000286835 LINC00336Q6ZUF6 198 aa8.9□□□□□ -0.98
SCAF4-201ENST00000286835 A0A096LNI7 61 aa8.89□□□□□ -0.99
SCAF4-201ENST00000286835 KLKP1Q107X0 134 aa8.89□□□□□ -0.99
SCAF4-201ENST00000286835 Q5XG85 94 aa8.89□□□□□ -0.99
SCAF4-201ENST00000286835 SMIM29Q86T20 159 aa8.89□□□□□ -0.99
SCAF4-201ENST00000286835 WFDC13Q8IUB5 93 aa8.89□□□□□ -0.99
SCAF4-201ENST00000286835 VWFP04275 2813 aa8.89□□□□□ -0.99
SCAF4-201ENST00000286835 TRBV7-4A0A0J9YYF1 115 aa8.89□□□□□ -0.99
SCAF4-201ENST00000286835 TENM4Q6N022 2769 aa8.89□□□□□ -0.99
SCAF4-201ENST00000286835 ESRGQ1W209 222 aa8.88□□□□□ -0.99
SCAF4-201ENST00000286835 C7orf33Q8WU49 177 aa8.88□□□□□ -0.99
SCAF4-201ENST00000286835 PRR34Q9NV39 138 aa8.88□□□□□ -0.99
SCAF4-201ENST00000286835 KMT2BQ9UMN6 2715 aaPredicted RBP8.88□□□□□ -0.99
SCAF4-201ENST00000286835 ST20-AS1Q8NBB2 130 aa8.87□□□□□ -0.99
SCAF4-201ENST00000286835 KRTAP10-11P60412 298 aa8.86□□□□□ -0.99
SCAF4-201ENST00000286835 LINC00528Q8N1L1 170 aa8.86□□□□□ -0.99
SCAF4-201ENST00000286835 GVQW2A0A096LPI5 108 aaPredicted RBP8.85□□□□□ -0.99
SCAF4-201ENST00000286835 BCE1O60756 84 aa8.85□□□□□ -0.99
SCAF4-201ENST00000286835 SERTAD4-AS1Q5TG53 156 aa8.85□□□□□ -0.99
SCAF4-201ENST00000286835 FAM168BA1KXE4 195 aa8.84□□□□□ -0.99
SCAF4-201ENST00000286835 A0A0G2JQZ4 141 aa8.83□□□□□ -1
SCAF4-201ENST00000286835 A0A1W2PNN7 141 aa8.83□□□□□ -1
SCAF4-201ENST00000286835 ATP5EP56381 51 aaPredicted RBP8.83□□□□□ -1
SCAF4-201ENST00000286835 LY6G6CO95867 125 aa8.83□□□□□ -1
SCAF4-201ENST00000286835 DHRS4-AS1Q9P1J3 65 aa8.83□□□□□ -1
SCAF4-201ENST00000286835 PRO0628Q9UI54 55 aa8.83□□□□□ -1
SCAF4-201ENST00000286835 C15orf56Q8N910 161 aa8.82□□□□□ -1
SCAF4-201ENST00000286835 IGKV4-1P06312 121 aa8.82□□□□□ -1
SCAF4-201ENST00000286835 Q8N377 158 aa8.8□□□□□ -1
SCAF4-201ENST00000286835 PSPHP1O15172 72 aa8.8□□□□□ -1
SCAF4-201ENST00000286835 MP68P56378 58 aa8.8□□□□□ -1
SCAF4-201ENST00000286835 NBPF19A0A087WUL8 3843 aa8.79□□□□□ -1
SCAF4-201ENST00000286835 MDFIQ99750 246 aa8.78□□□□□ -1
SCAF4-201ENST00000286835 PRLHP81277 87 aa8.77□□□□□ -1
SCAF4-201ENST00000286835 TENM1Q9UKZ4 2725 aa8.77□□□□□ -1.01
SCAF4-201ENST00000286835 A0A087WSZ3 146 aa8.76□□□□□ -1.01
SCAF4-201ENST00000286835 K7EIL1 84 aa8.76□□□□□ -1.01
SCAF4-201ENST00000286835 FP248Q71RG6 208 aaPredicted RBP8.76□□□□□ -1.01
SCAF4-201ENST00000286835 UBE2AP49459 152 aa8.75□□□□□ -1.01
SCAF4-201ENST00000286835 Q6ZRX8 168 aa8.75□□□□□ -1.01
SCAF4-201ENST00000286835 LINC00208Q96KT6 92 aa8.75□□□□□ -1.01
SCAF4-201ENST00000286835 H0Y9J4 135 aa8.75□□□□□ -1.01
SCAF4-201ENST00000286835 K7EQZ3 153 aa8.75□□□□□ -1.01
SCAF4-201ENST00000286835 MRPL55Q7Z7F7 128 aaKnown RBP8.75□□□□□ -1.01
SCAF4-201ENST00000286835 ZNF469Q96JG9 3925 aaPredicted RBP8.74□□□□□ -1.01
SCAF4-201ENST00000286835 FAM229BQ4G0N7 80 aa8.74□□□□□ -1.01
SCAF4-201ENST00000286835 C14orf177Q52M58 125 aa8.74□□□□□ -1.01
SCAF4-201ENST00000286835 C1orf195Q5TG92 126 aa8.74□□□□□ -1.01
SCAF4-201ENST00000286835 PDZD2O15018 2839 aa8.73□□□□□ -1.01
SCAF4-201ENST00000286835 NUPR2A6NF83 97 aa8.73□□□□□ -1.01
SCAF4-201ENST00000286835 Q8NBF4 154 aa8.73□□□□□ -1.01
SCAF4-201ENST00000286835 STAB2Q8WWQ8 2551 aa8.73□□□□□ -1.01
SCAF4-201ENST00000286835 A0A1W2PNM2 257 aa8.72□□□□□ -1.01
SCAF4-201ENST00000286835 LINC01556Q5JQF7 62 aa8.72□□□□□ -1.01
SCAF4-201ENST00000286835 CASC10Q5T4H9 136 aa8.72□□□□□ -1.01
SCAF4-201ENST00000286835 KCNQ1DNQ9H478 68 aa8.72□□□□□ -1.01
SCAF4-201ENST00000286835 ERC2-IT1O76042 136 aa8.72□□□□□ -1.01
SCAF4-201ENST00000286835 REG3GQ6UW15 175 aa8.72□□□□□ -1.01
SCAF4-201ENST00000286835 OTOGQ6ZRI0 2925 aa8.71□□□□□ -1.01
SCAF4-201ENST00000286835 RPL37AP61513 92 aaKnown RBP8.71□□□□□ -1.02
SCAF4-201ENST00000286835 OCR1Q9BZK8 76 aa8.71□□□□□ -1.02
SCAF4-201ENST00000286835 PKD1L1Q8TDX9 2849 aa8.71□□□□□ -1.02
SCAF4-201ENST00000286835 HCG22E2RYF7 251 aa8.7□□□□□ -1.02
SCAF4-201ENST00000286835 NDUFS5O43920 106 aa8.7□□□□□ -1.02
SCAF4-201ENST00000286835 LINC00476Q8WZB0 136 aa8.69□□□□□ -1.02
SCAF4-201ENST00000286835 EPM2AB3EWF7 344 aa8.69□□□□□ -1.02
SCAF4-201ENST00000286835 Q9BRP9 147 aa8.68□□□□□ -1.02
SCAF4-201ENST00000286835 WIPF1O43516 503 aa8.67□□□□□ -1.02
SCAF4-201ENST00000286835 LINC00588Q9Y4M8 146 aa8.67□□□□□ -1.02
SCAF4-201ENST00000286835 IGLV1-50A0A075B6I6 118 aa8.66□□□□□ -1.02
SCAF4-201ENST00000286835 SPTSSBQ8NFR3 76 aa8.65□□□□□ -1.02
SCAF4-201ENST00000286835 V9GYY9 64 aa8.65□□□□□ -1.02
SCAF4-201ENST00000286835 C1orf64Q8NEQ6 169 aa8.65□□□□□ -1.02
SCAF4-201ENST00000286835 TENM3Q9P273 2699 aa8.65□□□□□ -1.02
SCAF4-201ENST00000286835 AKAP9Q99996 3911 aa8.64□□□□□ -1.03
SCAF4-201ENST00000286835 H3BNG1 76 aa8.63□□□□□ -1.03
SCAF4-201ENST00000286835 IGLV5-48A0A075B6I7 105 aa8.63□□□□□ -1.03
SCAF4-201ENST00000286835 CASC2Q6XLA1 102 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms