RNA–Protein interactions for RNA: ENST00000284041.7

SREK1-201, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best)

Gene SREK1, Length 3,751 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-201ENST00000284041 Q8N9L7 120 aa2.07□□□□□ -2.08
SREK1-201ENST00000284041 MINOS1-NBL1R4GNA1 71 aa2.07□□□□□ -2.08
SREK1-201ENST00000284041 IGKV2-40A0A087WW87 121 aaPredicted RBP2.06□□□□□ -2.08
SREK1-201ENST00000284041 IGKV2D-40P01614 121 aaPredicted RBP2.06□□□□□ -2.08
SREK1-201ENST00000284041 TLN2Q9Y4G6 2542 aa2.06□□□□□ -2.08
SREK1-201ENST00000284041 AKAP9Q99996 3911 aa2.06□□□□□ -2.08
SREK1-201ENST00000284041 KRTAP13-3Q3SY46 172 aa2.06□□□□□ -2.08
SREK1-201ENST00000284041 GAFA1Q96PS6 74 aa2.06□□□□□ -2.08
SREK1-201ENST00000284041 A0A1B0GVY2 172 aa2.06□□□□□ -2.08
SREK1-201ENST00000284041 C10orf99Q6UWK7 81 aa2.05□□□□□ -2.08
SREK1-201ENST00000284041 RPL39LQ96EH5 51 aaKnown RBP2.05□□□□□ -2.08
SREK1-201ENST00000284041 NBPF19A0A087WUL8 3843 aa2.05□□□□□ -2.08
SREK1-201ENST00000284041 MUC6Q6W4X9 2439 aa2.05□□□□□ -2.08
SREK1-201ENST00000284041 TRGV1A0A0A0MS02 117 aa2.05□□□□□ -2.08
SREK1-201ENST00000284041 C5orf56Q8N8D9 126 aa2.05□□□□□ -2.08
SREK1-201ENST00000284041 TMEM167AQ8TBQ9 72 aa2.05□□□□□ -2.08
SREK1-201ENST00000284041 SPTBN1Q01082 2364 aaKnown RBP2.04□□□□□ -2.08
SREK1-201ENST00000284041 IGLV6-57P01721 117 aa2.04□□□□□ -2.08
SREK1-201ENST00000284041 TPRXLQ17RH7 258 aa2.04□□□□□ -2.08
SREK1-201ENST00000284041 TIMM8BQ9Y5J9 83 aaPredicted RBP2.04□□□□□ -2.08
SREK1-201ENST00000284041 FLNAP21333 2647 aaKnown RBP2.04□□□□□ -2.08
SREK1-201ENST00000284041 M0QY20 66 aa2.04□□□□□ -2.08
SREK1-201ENST00000284041 INE1O15225 51 aa2.04□□□□□ -2.08
SREK1-201ENST00000284041 RNASE3P12724 160 aaKnown RBP2.04□□□□□ -2.08
SREK1-201ENST00000284041 LINC00158P58513 81 aa2.04□□□□□ -2.08
SREK1-201ENST00000284041 KRTAP17-1Q9BYP8 105 aa2.04□□□□□ -2.08
SREK1-201ENST00000284041 TFF1P04155 84 aa2.03□□□□□ -2.08
SREK1-201ENST00000284041 RPL39P62891 51 aaKnown RBP2.03□□□□□ -2.08
SREK1-201ENST00000284041 ACANP16112 2415 aa2.03□□□□□ -2.08
SREK1-201ENST00000284041 SONP18583 2426 aaKnown RBP2.02□□□□□ -2.09
SREK1-201ENST00000284041 K7EIM0 57 aa2.02□□□□□ -2.09
SREK1-201ENST00000284041 MGAM2Q2M2H8 2515 aa2.02□□□□□ -2.09
SREK1-201ENST00000284041 PRB4P10163 310 aaPredicted RBP2.02□□□□□ -2.09
SREK1-201ENST00000284041 HAMPP81172 84 aa2.02□□□□□ -2.09
SREK1-201ENST00000284041 DEFB112Q30KQ8 113 aa2.02□□□□□ -2.09
SREK1-201ENST00000284041 SPACA4Q8TDM5 124 aa2.02□□□□□ -2.09
SREK1-201ENST00000284041 MYCBP2O75592 4640 aa2.01□□□□□ -2.09
SREK1-201ENST00000284041 KRTAP10-3P60369 221 aa2.01□□□□□ -2.09
SREK1-201ENST00000284041 SPRR5A0A1B0GTR4 108 aa2.01□□□□□ -2.09
SREK1-201ENST00000284041 H3BSH0 61 aa2.01□□□□□ -2.09
SREK1-201ENST00000284041 MRPL33O75394 65 aaKnown RBP2.01□□□□□ -2.09
SREK1-201ENST00000284041 LCE3DQ9BYE3 92 aa2.01□□□□□ -2.09
SREK1-201ENST00000284041 CACNA1EQ15878 2313 aa2.01□□□□□ -2.09
SREK1-201ENST00000284041 STAB1Q9NY15 2570 aa2.01□□□□□ -2.09
SREK1-201ENST00000284041 WT1-ASQ06250 92 aa2□□□□□ -2.09
SREK1-201ENST00000284041 G3V318 75 aa2□□□□□ -2.09
SREK1-201ENST00000284041 KRTAP13-2Q52LG2 175 aa2□□□□□ -2.09
SREK1-201ENST00000284041 DOCK10Q96BY6 2186 aa2□□□□□ -2.09
SREK1-201ENST00000284041 CCL19Q99731 98 aa2□□□□□ -2.09
SREK1-201ENST00000284041 CCL26Q9Y258 94 aa2□□□□□ -2.09
SREK1-201ENST00000284041 EP300Q09472 2414 aaPredicted RBP2□□□□□ -2.09
SREK1-201ENST00000284041 MT3P25713 68 aa1.99□□□□□ -2.09
SREK1-201ENST00000284041 COX14Q96I36 57 aa1.99□□□□□ -2.09
SREK1-201ENST00000284041 MED13Q9UHV7 2174 aa1.99□□□□□ -2.09
SREK1-201ENST00000284041 FLNCQ14315 2725 aa1.99□□□□□ -2.09
SREK1-201ENST00000284041 SPINK9Q5DT21 86 aa1.99□□□□□ -2.09
SREK1-201ENST00000284041 TP53AIP1Q9HCN2 124 aa1.99□□□□□ -2.09
SREK1-201ENST00000284041 CDKN2A-AS1Q9UH64 79 aa1.98□□□□□ -2.09
SREK1-201ENST00000284041 FREM1Q5H8C1 2179 aa1.98□□□□□ -2.09
SREK1-201ENST00000284041 A8MTW9 85 aa1.98□□□□□ -2.09
SREK1-201ENST00000284041 KRTAP12-2P59991 146 aa1.98□□□□□ -2.09
SREK1-201ENST00000284041 COX6A2Q02221 97 aa1.98□□□□□ -2.09
SREK1-201ENST00000284041 C10orf55Q5SWW7 151 aa1.98□□□□□ -2.09
SREK1-201ENST00000284041 INTS1Q8N201 2190 aaKnown RBP1.97□□□□□ -2.09
SREK1-201ENST00000284041 KRTAP10-5P60370 271 aa1.97□□□□□ -2.09
SREK1-201ENST00000284041 Q6ZRX8 168 aa1.97□□□□□ -2.09
SREK1-201ENST00000284041 H0YAA0 97 aa1.97□□□□□ -2.09
SREK1-201ENST00000284041 PRR9Q5T870 116 aa1.97□□□□□ -2.09
SREK1-201ENST00000284041 IGKV2-24A0A0C4DH68 120 aa1.97□□□□□ -2.09
SREK1-201ENST00000284041 A0A1B0GU69 56 aa1.97□□□□□ -2.09
SREK1-201ENST00000284041 K7EQZ3 153 aa1.97□□□□□ -2.09
SREK1-201ENST00000284041 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.97□□□□□ -2.09
SREK1-201ENST00000284041 COX6B2Q6YFQ2 88 aa1.97□□□□□ -2.09
SREK1-201ENST00000284041 RPL37AP61513 92 aaKnown RBP1.96□□□□□ -2.1
SREK1-201ENST00000284041 Q6ZRN7 208 aaPredicted RBP1.95□□□□□ -2.1
SREK1-201ENST00000284041 SPTBP11277 2137 aa1.94□□□□□ -2.1
SREK1-201ENST00000284041 KRTAP5-3Q6L8H2 238 aa1.94□□□□□ -2.1
SREK1-201ENST00000284041 PRO3102Q9H379 93 aa1.94□□□□□ -2.1
SREK1-201ENST00000284041 GVQW2A0A096LPI5 108 aaPredicted RBP1.94□□□□□ -2.1
SREK1-201ENST00000284041 A0A0C4DFX4 3053 aa1.94□□□□□ -2.1
SREK1-201ENST00000284041 MYO7AQ13402 2215 aa1.93□□□□□ -2.1
SREK1-201ENST00000284041 MMP24-AS1A0A0U1RRL7 71 aa1.93□□□□□ -2.1
SREK1-201ENST00000284041 BRWD1Q9NSI6 2320 aa1.93□□□□□ -2.1
SREK1-201ENST00000284041 DNAH7Q8WXX0 4024 aa1.93□□□□□ -2.1
SREK1-201ENST00000284041 SPTBN5Q9NRC6 3674 aaKnown RBP1.93□□□□□ -2.1
SREK1-201ENST00000284041 K7EIL1 84 aa1.93□□□□□ -2.1
SREK1-201ENST00000284041 LY6EQ16553 131 aa1.93□□□□□ -2.1
SREK1-201ENST00000284041 KAAG1Q9UBP8 84 aa1.93□□□□□ -2.1
SREK1-201ENST00000284041 SACSQ9NZJ4 4579 aa1.92□□□□□ -2.1
SREK1-201ENST00000284041 ZFHX4Q86UP3 3567 aa1.92□□□□□ -2.1
SREK1-201ENST00000284041 ACYP2P14621 99 aa1.92□□□□□ -2.1
SREK1-201ENST00000284041 ICE1Q9Y2F5 2266 aa1.92□□□□□ -2.1
SREK1-201ENST00000284041 CACNA1CQ13936 2221 aa1.91□□□□□ -2.1
SREK1-201ENST00000284041 KRTAP1-1Q07627 177 aa1.91□□□□□ -2.1
SREK1-201ENST00000284041 DNAH1Q9P2D7 4330 aa1.91□□□□□ -2.1
SREK1-201ENST00000284041 RPL39P5Q59GN2 51 aa1.91□□□□□ -2.1
SREK1-201ENST00000284041 VPS13BQ7Z7G8 4022 aa1.91□□□□□ -2.1
SREK1-201ENST00000284041 Q6ZSA8 131 aa1.9□□□□□ -2.11
SREK1-201ENST00000284041 CMYA5Q8N3K9 4069 aa1.9□□□□□ -2.11
SREK1-201ENST00000284041 DNAH3Q8TD57 4116 aa1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 166 ms