RNA–Protein interactions for RNA: ENST00000274938.7

SCUBE3-201, Transcript of signal peptide, CUB domain and EGF like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCUBE3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3-201ENST00000274938 MYO18BQ8IUG5 2567 aa5.67□□□□□ -1.5
SCUBE3-201ENST00000274938 IGLV5-37A0A075B6J1 123 aa5.67□□□□□ -1.5
SCUBE3-201ENST00000274938 RBM12B-AS1Q9P1G2 102 aa5.67□□□□□ -1.5
SCUBE3-201ENST00000274938 OCR1Q9BZK8 76 aa5.66□□□□□ -1.5
SCUBE3-201ENST00000274938 CCDC168Q8NDH2 2452 aa5.66□□□□□ -1.5
SCUBE3-201ENST00000274938 SPRR4Q96PI1 79 aa5.66□□□□□ -1.5
SCUBE3-201ENST00000274938 C9orf163Q8N9P6 203 aa5.65□□□□□ -1.5
SCUBE3-201ENST00000274938 KRTAP24-1Q3LI83 254 aa5.65□□□□□ -1.51
SCUBE3-201ENST00000274938 WWC2-AS2Q96NR7 200 aa5.65□□□□□ -1.51
SCUBE3-201ENST00000274938 IGF2RP11717 2491 aa5.64□□□□□ -1.51
SCUBE3-201ENST00000274938 DOPEY1Q5JWR5 2465 aa5.64□□□□□ -1.51
SCUBE3-201ENST00000274938 IGLV7-46A0A075B6I9 117 aa5.64□□□□□ -1.51
SCUBE3-201ENST00000274938 A0A0D9SG42 100 aa5.64□□□□□ -1.51
SCUBE3-201ENST00000274938 PIEZO2Q9H5I5 2752 aa5.64□□□□□ -1.51
SCUBE3-201ENST00000274938 IGLV7-43P04211 117 aa5.63□□□□□ -1.51
SCUBE3-201ENST00000274938 WDR87Q6ZQQ6 2873 aa5.63□□□□□ -1.51
SCUBE3-201ENST00000274938 C9orf92A6NGG3 77 aa5.63□□□□□ -1.51
SCUBE3-201ENST00000274938 NCOR2Q9Y618 2525 aa5.62□□□□□ -1.51
SCUBE3-201ENST00000274938 CNBPP62633 177 aaKnown RBP5.62□□□□□ -1.51
SCUBE3-201ENST00000274938 LINC00483Q53H64 154 aa5.62□□□□□ -1.51
SCUBE3-201ENST00000274938 A0A0G2JQZ4 141 aa5.62□□□□□ -1.51
SCUBE3-201ENST00000274938 A0A1W2PNN7 141 aa5.62□□□□□ -1.51
SCUBE3-201ENST00000274938 LINC01558Q9Y6Z2 57 aa5.62□□□□□ -1.51
SCUBE3-201ENST00000274938 C19orf73Q9NVV2 129 aa5.61□□□□□ -1.51
SCUBE3-201ENST00000274938 A0A087WTM6 91 aa5.61□□□□□ -1.51
SCUBE3-201ENST00000274938 Q8N1X5 172 aa5.61□□□□□ -1.51
SCUBE3-201ENST00000274938 PRR26Q8N8Z3 221 aa5.6□□□□□ -1.51
SCUBE3-201ENST00000274938 A0A1B0GU33 70 aa5.6□□□□□ -1.51
SCUBE3-201ENST00000274938 TLN1Q9Y490 2541 aaKnown RBP5.59□□□□□ -1.51
SCUBE3-201ENST00000274938 MYO9AB2RTY4 2548 aa5.59□□□□□ -1.51
SCUBE3-201ENST00000274938 A0A0A0MQY5 61 aa5.58□□□□□ -1.52
SCUBE3-201ENST00000274938 PRAC1Q96KF2 57 aa5.58□□□□□ -1.52
SCUBE3-201ENST00000274938 PSORS1C2Q9UIG4 136 aa5.58□□□□□ -1.52
SCUBE3-201ENST00000274938 GIG44P09565 113 aaPredicted RBP5.57□□□□□ -1.52
SCUBE3-201ENST00000274938 CEP350Q5VT06 3117 aa5.57□□□□□ -1.52
SCUBE3-201ENST00000274938 DMAC1Q96GE9 116 aa5.56□□□□□ -1.52
SCUBE3-201ENST00000274938 Q5XG85 94 aa5.56□□□□□ -1.52
SCUBE3-201ENST00000274938 COL4A2P08572 1712 aa5.55□□□□□ -1.52
SCUBE3-201ENST00000274938 Q8N9P0 234 aaPredicted RBP5.55□□□□□ -1.52
SCUBE3-201ENST00000274938 HRES1P13985 223 aa5.54□□□□□ -1.52
SCUBE3-201ENST00000274938 ZNF575Q86XF7 245 aa5.54□□□□□ -1.52
SCUBE3-201ENST00000274938 ANAPC11Q9NYG5 84 aa5.54□□□□□ -1.52
SCUBE3-201ENST00000274938 C5orf42Q9H799 3197 aa5.54□□□□□ -1.52
SCUBE3-201ENST00000274938 BRCA2P51587 3418 aa5.53□□□□□ -1.52
SCUBE3-201ENST00000274938 K7EIL1 84 aa5.53□□□□□ -1.52
SCUBE3-201ENST00000274938 KRTAP10-11P60412 298 aa5.52□□□□□ -1.53
SCUBE3-201ENST00000274938 CAMK2N1Q7Z7J9 78 aa5.52□□□□□ -1.53
SCUBE3-201ENST00000274938 FAM229BQ4G0N7 80 aa5.51□□□□□ -1.53
SCUBE3-201ENST00000274938 ZFYVE26Q68DK2 2539 aa5.51□□□□□ -1.53
SCUBE3-201ENST00000274938 ZNF462Q96JM2 2506 aa5.51□□□□□ -1.53
SCUBE3-201ENST00000274938 LRRK2Q5S007 2527 aa5.5□□□□□ -1.53
SCUBE3-201ENST00000274938 FP248Q71RG6 208 aaPredicted RBP5.5□□□□□ -1.53
SCUBE3-201ENST00000274938 PCSK5Q92824 1860 aa5.5□□□□□ -1.53
SCUBE3-201ENST00000274938 COL27A1Q8IZC6 1860 aaPredicted RBP5.49□□□□□ -1.53
SCUBE3-201ENST00000274938 MMP24-AS1A0A0U1RRL7 71 aa5.49□□□□□ -1.53
SCUBE3-201ENST00000274938 MKI67P46013 3256 aaKnown RBP5.49□□□□□ -1.53
SCUBE3-201ENST00000274938 Q5VV11 94 aa5.49□□□□□ -1.53
SCUBE3-201ENST00000274938 ABCA12Q86UK0 2595 aa5.48□□□□□ -1.53
SCUBE3-201ENST00000274938 CASC10Q5T4H9 136 aa5.48□□□□□ -1.53
SCUBE3-201ENST00000274938 FN1P02751 2386 aaKnown RBP5.48□□□□□ -1.53
SCUBE3-201ENST00000274938 SMR3BP02814 79 aaPredicted RBP5.47□□□□□ -1.53
SCUBE3-201ENST00000274938 Q6ZSA8 131 aa5.47□□□□□ -1.53
SCUBE3-201ENST00000274938 TLN2Q9Y4G6 2542 aa5.46□□□□□ -1.53
SCUBE3-201ENST00000274938 ANKRD11Q6UB99 2663 aaPredicted RBP5.46□□□□□ -1.53
SCUBE3-201ENST00000274938 A0A096LNT2 108 aa5.46□□□□□ -1.54
SCUBE3-201ENST00000274938 USP9XQ93008 2570 aaPredicted RBP5.46□□□□□ -1.54
SCUBE3-201ENST00000274938 ZCCHC13Q8WW36 166 aaKnown RBP5.46□□□□□ -1.54
SCUBE3-201ENST00000274938 ASB16-AS1Q495Z4 193 aa5.45□□□□□ -1.54
SCUBE3-201ENST00000274938 JMJD1CQ15652 2540 aa5.45□□□□□ -1.54
SCUBE3-201ENST00000274938 CSAG1Q6PB30 78 aa5.45□□□□□ -1.54
SCUBE3-201ENST00000274938 CYSTM1Q9H1C7 97 aa5.43□□□□□ -1.54
SCUBE3-201ENST00000274938 KRTAP10-3P60369 221 aa5.42□□□□□ -1.54
SCUBE3-201ENST00000274938 SPINK7P58062 85 aa5.41□□□□□ -1.54
SCUBE3-201ENST00000274938 S4R3F8 94 aa5.41□□□□□ -1.54
SCUBE3-201ENST00000274938 SPTBN4Q9H254 2564 aa5.41□□□□□ -1.54
SCUBE3-201ENST00000274938 SPRR1BP22528 89 aa5.41□□□□□ -1.54
SCUBE3-201ENST00000274938 SPRR1AP35321 89 aa5.41□□□□□ -1.54
SCUBE3-201ENST00000274938 TNP2Q05952 138 aa5.4□□□□□ -1.54
SCUBE3-201ENST00000274938 Q5W150 140 aa5.4□□□□□ -1.55
SCUBE3-201ENST00000274938 CR1P17927 2039 aa5.4□□□□□ -1.55
SCUBE3-201ENST00000274938 USP9YO00507 2555 aaPredicted RBP5.39□□□□□ -1.55
SCUBE3-201ENST00000274938 ROMO1P60602 79 aa5.39□□□□□ -1.55
SCUBE3-201ENST00000274938 CEP295Q9C0D2 2601 aa5.38□□□□□ -1.55
SCUBE3-201ENST00000274938 LINC00472Q9H8W2 130 aa5.38□□□□□ -1.55
SCUBE3-201ENST00000274938 RPL37P61927 97 aaKnown RBP5.37□□□□□ -1.55
SCUBE3-201ENST00000274938 LAMA3Q16787 3333 aa5.36□□□□□ -1.55
SCUBE3-201ENST00000274938 SETD2Q9BYW2 2564 aaPredicted RBP5.36□□□□□ -1.55
SCUBE3-201ENST00000274938 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.36□□□□□ -1.55
SCUBE3-201ENST00000274938 HTTP42858 3142 aa5.35□□□□□ -1.55
SCUBE3-201ENST00000274938 PLAC8Q9NZF1 115 aa5.35□□□□□ -1.55
SCUBE3-201ENST00000274938 ANKRD17O75179 2603 aaKnown RBP5.35□□□□□ -1.55
SCUBE3-201ENST00000274938 F8P00451 2351 aa5.35□□□□□ -1.55
SCUBE3-201ENST00000274938 CDH23Q9H251 3354 aa5.35□□□□□ -1.55
SCUBE3-201ENST00000274938 PKD1L2Q7Z442 2459 aa5.35□□□□□ -1.55
SCUBE3-201ENST00000274938 M0R2T5 61 aa5.34□□□□□ -1.56
SCUBE3-201ENST00000274938 R4GN34 69 aa5.32□□□□□ -1.56
SCUBE3-201ENST00000274938 H1FX-AS1Q4G0G2 97 aa5.32□□□□□ -1.56
SCUBE3-201ENST00000274938 CHD8Q9HCK8 2581 aa5.32□□□□□ -1.56
SCUBE3-201ENST00000274938 OXTP01178 125 aa5.31□□□□□ -1.56
SCUBE3-201ENST00000274938 XIRP2A4UGR9 3374 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms