RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 CBY1Q9Y3M2 126 aa8.73□□□□□ -1.01
SSBP1-201ENST00000265304 C1orf137Q5JT78 98 aa8.72□□□□□ -1.01
SSBP1-201ENST00000265304 CEND1Q8N111 149 aa8.72□□□□□ -1.01
SSBP1-201ENST00000265304 TRAV13-2A0A0B4J235 113 aa8.71□□□□□ -1.02
SSBP1-201ENST00000265304 HSD52Q0P140 79 aa8.71□□□□□ -1.02
SSBP1-201ENST00000265304 ZNF861PO60384 105 aa8.7□□□□□ -1.02
SSBP1-201ENST00000265304 HNRNPA3P51991 378 aaKnown RBP8.7□□□□□ -1.02
SSBP1-201ENST00000265304 S100A7L2Q5SY68 101 aa8.7□□□□□ -1.02
SSBP1-201ENST00000265304 PRO1933Q9H354 126 aa8.7□□□□□ -1.02
SSBP1-201ENST00000265304 SPINK6Q6UWN8 80 aa8.69□□□□□ -1.02
SSBP1-201ENST00000265304 CFC1BP0CG36 223 aa8.68□□□□□ -1.02
SSBP1-201ENST00000265304 CFC1P0CG37 223 aa8.68□□□□□ -1.02
SSBP1-201ENST00000265304 TRAV23DV6A0A075B6W5 121 aa8.67□□□□□ -1.02
SSBP1-201ENST00000265304 A0A0B4J2C4 111 aa8.67□□□□□ -1.02
SSBP1-201ENST00000265304 TRBV7-6A0A0J9YX20 115 aa8.67□□□□□ -1.02
SSBP1-201ENST00000265304 A0A1B0GWB2 263 aa8.67□□□□□ -1.02
SSBP1-201ENST00000265304 TSTD3H0UI37 97 aa8.67□□□□□ -1.02
SSBP1-201ENST00000265304 FXYD2P54710 66 aa8.67□□□□□ -1.02
SSBP1-201ENST00000265304 ZNF73O43830 326 aaPredicted RBP8.66□□□□□ -1.02
SSBP1-201ENST00000265304 RPL28P46779 137 aaKnown RBP8.66□□□□□ -1.02
SSBP1-201ENST00000265304 ABCA13Q86UQ4 5058 aa8.66□□□□□ -1.02
SSBP1-201ENST00000265304 TMEM238LA0A1B0GVL6 79 aa8.65□□□□□ -1.02
SSBP1-201ENST00000265304 A6NJY4 79 aa8.65□□□□□ -1.02
SSBP1-201ENST00000265304 B5MCH6 92 aa8.65□□□□□ -1.02
SSBP1-201ENST00000265304 OR13C6PQ8NH95 151 aa8.65□□□□□ -1.02
SSBP1-201ENST00000265304 A6NDN8 102 aa8.64□□□□□ -1.03
SSBP1-201ENST00000265304 DIRC1Q969H9 104 aa8.64□□□□□ -1.03
SSBP1-201ENST00000265304 MYCBP2O75592 4640 aa8.63□□□□□ -1.03
SSBP1-201ENST00000265304 INAFM2P0DMQ5 153 aa8.63□□□□□ -1.03
SSBP1-201ENST00000265304 Q6ZRX8 168 aa8.63□□□□□ -1.03
SSBP1-201ENST00000265304 BVES-AS1Q5T3Y7 98 aa8.62□□□□□ -1.03
SSBP1-201ENST00000265304 FAM19A1Q7Z5A9 133 aa8.62□□□□□ -1.03
SSBP1-201ENST00000265304 SMIM11BQ8TCY0 68 aa8.62□□□□□ -1.03
SSBP1-201ENST00000265304 LRP1Q07954 4544 aaKnown RBP8.61□□□□□ -1.03
SSBP1-201ENST00000265304 ETDCA0A1B0GVM5 59 aa8.61□□□□□ -1.03
SSBP1-201ENST00000265304 CTAG1AP78358 180 aa8.61□□□□□ -1.03
SSBP1-201ENST00000265304 PRO1854Q9UHT4 67 aa8.61□□□□□ -1.03
SSBP1-201ENST00000265304 UBE2AP49459 152 aa8.6□□□□□ -1.03
SSBP1-201ENST00000265304 ELOF1P60002 83 aaKnown RBP8.6□□□□□ -1.03
SSBP1-201ENST00000265304 PRLHP81277 87 aa8.6□□□□□ -1.03
SSBP1-201ENST00000265304 C6orf99Q4VX62 202 aa8.6□□□□□ -1.03
SSBP1-201ENST00000265304 FAT3Q8TDW7 4589 aa8.59□□□□□ -1.03
SSBP1-201ENST00000265304 RPL13AP40429 203 aaKnown RBP8.59□□□□□ -1.03
SSBP1-201ENST00000265304 SMCR5Q8TEV8 140 aa8.59□□□□□ -1.03
SSBP1-201ENST00000265304 Q9BRP9 147 aa8.59□□□□□ -1.03
SSBP1-201ENST00000265304 M0R143 59 aa8.58□□□□□ -1.04
SSBP1-201ENST00000265304 KRTAP1-4P0C5Y4 121 aa8.58□□□□□ -1.04
SSBP1-201ENST00000265304 HINT1P49773 126 aaPredicted RBP8.58□□□□□ -1.04
SSBP1-201ENST00000265304 RAB37Q96AX2 223 aa8.58□□□□□ -1.04
SSBP1-201ENST00000265304 DMBT1Q9UGM3 2413 aaPredicted RBP8.56□□□□□ -1.04
SSBP1-201ENST00000265304 OXTP01178 125 aa8.56□□□□□ -1.04
SSBP1-201ENST00000265304 COX7BP24311 80 aa8.56□□□□□ -1.04
SSBP1-201ENST00000265304 NHP2Q9NX24 153 aaKnown RBP8.56□□□□□ -1.04
SSBP1-201ENST00000265304 DHRS4-AS1Q9P1J3 65 aa8.56□□□□□ -1.04
SSBP1-201ENST00000265304 KRTAP29-1A8MX34 341 aaPredicted RBP8.55□□□□□ -1.04
SSBP1-201ENST00000265304 LINC01600Q96MT4 127 aa8.55□□□□□ -1.04
SSBP1-201ENST00000265304 LOC100996750A0A140TA64 210 aa8.54□□□□□ -1.04
SSBP1-201ENST00000265304 KRTAP4-6Q9BYQ5 205 aa8.54□□□□□ -1.04
SSBP1-201ENST00000265304 PCLOQ9Y6V0 5065 aa8.53□□□□□ -1.04
SSBP1-201ENST00000265304 ERC2-IT1O76042 136 aa8.53□□□□□ -1.04
SSBP1-201ENST00000265304 VAMP3Q15836 100 aa8.53□□□□□ -1.04
SSBP1-201ENST00000265304 HIGD2AQ9BW72 106 aa8.53□□□□□ -1.04
SSBP1-201ENST00000265304 FAM229BQ4G0N7 80 aa8.52□□□□□ -1.05
SSBP1-201ENST00000265304 LINC00483Q53H64 154 aa8.52□□□□□ -1.05
SSBP1-201ENST00000265304 SPRR4Q96PI1 79 aa8.52□□□□□ -1.05
SSBP1-201ENST00000265304 TNXBP22105 4242 aa8.52□□□□□ -1.05
SSBP1-201ENST00000265304 H0YGX0 51 aa8.51□□□□□ -1.05
SSBP1-201ENST00000265304 K7ERJ3 54 aa8.51□□□□□ -1.05
SSBP1-201ENST00000265304 KRTAP10-8P60410 259 aa8.51□□□□□ -1.05
SSBP1-201ENST00000265304 LINC00575Q6W349 94 aa8.51□□□□□ -1.05
SSBP1-201ENST00000265304 SPRR1BP22528 89 aa8.5□□□□□ -1.05
SSBP1-201ENST00000265304 ZNF706Q9Y5V0 76 aaPredicted RBP8.5□□□□□ -1.05
SSBP1-201ENST00000265304 TSPAN13O95857 204 aa8.49□□□□□ -1.05
SSBP1-201ENST00000265304 MT1HL1P0DM35 61 aa8.49□□□□□ -1.05
SSBP1-201ENST00000265304 H7C2G1 150 aa8.48□□□□□ -1.05
SSBP1-201ENST00000265304 IGLV5-48A0A075B6I7 105 aa8.47□□□□□ -1.05
SSBP1-201ENST00000265304 A0A1B0GX51 115 aa8.47□□□□□ -1.05
SSBP1-201ENST00000265304 TRIAP1O43715 76 aa8.47□□□□□ -1.05
SSBP1-201ENST00000265304 LINC01547P58512 204 aaPredicted RBP8.45□□□□□ -1.06
SSBP1-201ENST00000265304 A0A087X002 238 aa8.44□□□□□ -1.06
SSBP1-201ENST00000265304 hADV29S1A0JD25 119 aa8.44□□□□□ -1.06
SSBP1-201ENST00000265304 SLC25A20O43772 301 aa8.44□□□□□ -1.06
SSBP1-201ENST00000265304 CRYGAP11844 174 aa8.44□□□□□ -1.06
SSBP1-201ENST00000265304 Q1RN00 199 aa8.44□□□□□ -1.06
SSBP1-201ENST00000265304 ST20-AS1Q8NBB2 130 aa8.44□□□□□ -1.06
SSBP1-201ENST00000265304 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.43□□□□□ -1.06
SSBP1-201ENST00000265304 FAM218AQ96MZ4 157 aa8.43□□□□□ -1.06
SSBP1-201ENST00000265304 SNHG12Q9BXW3 62 aa8.43□□□□□ -1.06
SSBP1-201ENST00000265304 COX6CP09669 75 aa8.42□□□□□ -1.06
SSBP1-201ENST00000265304 KRTAP13-2Q52LG2 175 aa8.42□□□□□ -1.06
SSBP1-201ENST00000265304 PRR26Q8N8Z3 221 aa8.42□□□□□ -1.06
SSBP1-201ENST00000265304 ANAPC11Q9NYG5 84 aa8.42□□□□□ -1.06
SSBP1-201ENST00000265304 TEX49A0A1B0GTD5 131 aa8.41□□□□□ -1.06
SSBP1-201ENST00000265304 GAGE2AQ6NT46 116 aa8.41□□□□□ -1.06
SSBP1-201ENST00000265304 PPDPFLQ8WWR9 84 aa8.41□□□□□ -1.06
SSBP1-201ENST00000265304 Q8N377 158 aa8.4□□□□□ -1.06
SSBP1-201ENST00000265304 TAX1BP3O14907 124 aa8.39□□□□□ -1.07
SSBP1-201ENST00000265304 SNCGO76070 127 aa8.39□□□□□ -1.07
SSBP1-201ENST00000265304 PSMB2P49721 201 aa8.39□□□□□ -1.07
SSBP1-201ENST00000265304 OCIAD2Q56VL3 154 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms