RNA–Protein interactions for RNA: ENST00000263666.8

PDZRN3-201, Transcript of PDZ domain containing ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZRN3, Length 4,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-201ENST00000263666 TRAV7A0A075B6U4 112 aa10.82□□□□□ -0.68
PDZRN3-201ENST00000263666 TM2D3Q9BRN9 247 aa10.82□□□□□ -0.68
PDZRN3-201ENST00000263666 WFDC13Q8IUB5 93 aa10.81□□□□□ -0.68
PDZRN3-201ENST00000263666 C2orf48Q96LS8 159 aa10.81□□□□□ -0.68
PDZRN3-201ENST00000263666 Q6ZRP5 223 aa10.81□□□□□ -0.68
PDZRN3-201ENST00000263666 FBN1P35555 2871 aaKnown RBP10.81□□□□□ -0.68
PDZRN3-201ENST00000263666 LINC00612Q8N6U2 182 aa10.8□□□□□ -0.68
PDZRN3-201ENST00000263666 FAM168BA1KXE4 195 aa10.79□□□□□ -0.68
PDZRN3-201ENST00000263666 C7orf33Q8WU49 177 aa10.79□□□□□ -0.68
PDZRN3-201ENST00000263666 IGLV6-57P01721 117 aa10.79□□□□□ -0.68
PDZRN3-201ENST00000263666 A0A0G2JQZ4 141 aa10.79□□□□□ -0.68
PDZRN3-201ENST00000263666 A0A1W2PNN7 141 aa10.79□□□□□ -0.68
PDZRN3-201ENST00000263666 ST20-AS1Q8NBB2 130 aa10.78□□□□□ -0.68
PDZRN3-201ENST00000263666 OTOGQ6ZRI0 2925 aa10.78□□□□□ -0.68
PDZRN3-201ENST00000263666 BRK1Q8WUW1 75 aa10.77□□□□□ -0.68
PDZRN3-201ENST00000263666 KRTAP10-11P60412 298 aa10.77□□□□□ -0.69
PDZRN3-201ENST00000263666 PKD1L1Q8TDX9 2849 aa10.77□□□□□ -0.69
PDZRN3-201ENST00000263666 C1orf137Q5JT78 98 aa10.77□□□□□ -0.69
PDZRN3-201ENST00000263666 A0A0U1RQV1 116 aa10.76□□□□□ -0.69
PDZRN3-201ENST00000263666 VPREB1P12018 145 aa10.76□□□□□ -0.69
PDZRN3-201ENST00000263666 C5orf47Q569G3 176 aa10.76□□□□□ -0.69
PDZRN3-201ENST00000263666 SVIPQ8NHG7 77 aa10.76□□□□□ -0.69
PDZRN3-201ENST00000263666 SERTAD4-AS1Q5TG53 156 aa10.75□□□□□ -0.69
PDZRN3-201ENST00000263666 H3BQ85 93 aa10.75□□□□□ -0.69
PDZRN3-201ENST00000263666 ELOF1P60002 83 aaKnown RBP10.75□□□□□ -0.69
PDZRN3-201ENST00000263666 PRLHP81277 87 aa10.75□□□□□ -0.69
PDZRN3-201ENST00000263666 TENM3Q9P273 2699 aa10.75□□□□□ -0.69
PDZRN3-201ENST00000263666 PKIGQ9Y2B9 76 aa10.73□□□□□ -0.69
PDZRN3-201ENST00000263666 OBSCN-AS1Q96MR7 158 aa10.72□□□□□ -0.69
PDZRN3-201ENST00000263666 TMEM254Q8TBM7 123 aa10.72□□□□□ -0.69
PDZRN3-201ENST00000263666 PRR34Q9NV39 138 aa10.72□□□□□ -0.69
PDZRN3-201ENST00000263666 UBE2AP49459 152 aa10.7□□□□□ -0.7
PDZRN3-201ENST00000263666 C15orf56Q8N910 161 aa10.7□□□□□ -0.7
PDZRN3-201ENST00000263666 STAB2Q8WWQ8 2551 aa10.7□□□□□ -0.7
PDZRN3-201ENST00000263666 KMT2BQ9UMN6 2715 aaPredicted RBP10.7□□□□□ -0.7
PDZRN3-201ENST00000263666 LY6G6CO95867 125 aa10.7□□□□□ -0.7
PDZRN3-201ENST00000263666 CASC10Q5T4H9 136 aa10.7□□□□□ -0.7
PDZRN3-201ENST00000263666 LINC00167Q96N53 147 aa10.69□□□□□ -0.7
PDZRN3-201ENST00000263666 LOC110117498A0A087WWA1 95 aa10.69□□□□□ -0.7
PDZRN3-201ENST00000263666 H0Y9J4 135 aa10.69□□□□□ -0.7
PDZRN3-201ENST00000263666 SMIM29Q86T20 159 aa10.68□□□□□ -0.7
PDZRN3-201ENST00000263666 MDFIQ99750 246 aa10.68□□□□□ -0.7
PDZRN3-201ENST00000263666 NDUFS5O43920 106 aa10.67□□□□□ -0.7
PDZRN3-201ENST00000263666 DHRS4-AS1Q9P1J3 65 aa10.67□□□□□ -0.7
PDZRN3-201ENST00000263666 K7EIL1 84 aa10.66□□□□□ -0.7
PDZRN3-201ENST00000263666 ZNF469Q96JG9 3925 aaPredicted RBP10.66□□□□□ -0.7
PDZRN3-201ENST00000263666 CXCL6P80162 114 aa10.66□□□□□ -0.7
PDZRN3-201ENST00000263666 A0A087WSZ3 146 aa10.65□□□□□ -0.7
PDZRN3-201ENST00000263666 MRPL55Q7Z7F7 128 aaKnown RBP10.65□□□□□ -0.71
PDZRN3-201ENST00000263666 LINC00528Q8N1L1 170 aa10.65□□□□□ -0.71
PDZRN3-201ENST00000263666 NUPR2A6NF83 97 aa10.64□□□□□ -0.71
PDZRN3-201ENST00000263666 LINC01556Q5JQF7 62 aa10.63□□□□□ -0.71
PDZRN3-201ENST00000263666 C14orf177Q52M58 125 aa10.63□□□□□ -0.71
PDZRN3-201ENST00000263666 SERP1Q9Y6X1 66 aa10.63□□□□□ -0.71
PDZRN3-201ENST00000263666 PRYO14603 147 aa10.62□□□□□ -0.71
PDZRN3-201ENST00000263666 LINC00474Q9P2X8 69 aa10.62□□□□□ -0.71
PDZRN3-201ENST00000263666 GVQW2A0A096LPI5 108 aaPredicted RBP10.62□□□□□ -0.71
PDZRN3-201ENST00000263666 TRBV7-6A0A0J9YX20 115 aa10.61□□□□□ -0.71
PDZRN3-201ENST00000263666 LINC00588Q9Y4M8 146 aa10.61□□□□□ -0.71
PDZRN3-201ENST00000263666 MP68P56378 58 aa10.6□□□□□ -0.71
PDZRN3-201ENST00000263666 REG3GQ6UW15 175 aa10.6□□□□□ -0.71
PDZRN3-201ENST00000263666 TRBV7-4A0A0J9YYF1 115 aa10.6□□□□□ -0.71
PDZRN3-201ENST00000263666 CHTF8P0CG12 524 aa10.6□□□□□ -0.71
PDZRN3-201ENST00000263666 Q8N377 158 aa10.6□□□□□ -0.71
PDZRN3-201ENST00000263666 H7BZZ5 65 aa10.59□□□□□ -0.71
PDZRN3-201ENST00000263666 SMIM26A0A096LP01 95 aa10.58□□□□□ -0.72
PDZRN3-201ENST00000263666 IGLV9-49A0A0B4J1Y8 123 aa10.57□□□□□ -0.72
PDZRN3-201ENST00000263666 ERC2-IT1O76042 136 aa10.57□□□□□ -0.72
PDZRN3-201ENST00000263666 CDK2AP2O75956 126 aa10.57□□□□□ -0.72
PDZRN3-201ENST00000263666 Q6ZRX8 168 aa10.57□□□□□ -0.72
PDZRN3-201ENST00000263666 RPL37AP61513 92 aaKnown RBP10.57□□□□□ -0.72
PDZRN3-201ENST00000263666 RPS28P62857 69 aaKnown RBP10.57□□□□□ -0.72
PDZRN3-201ENST00000263666 LINC00208Q96KT6 92 aa10.57□□□□□ -0.72
PDZRN3-201ENST00000263666 NDUFC1O43677 76 aa10.56□□□□□ -0.72
PDZRN3-201ENST00000263666 TRRAPQ9Y4A5 3859 aa10.55□□□□□ -0.72
PDZRN3-201ENST00000263666 OXTP01178 125 aa10.55□□□□□ -0.72
PDZRN3-201ENST00000263666 Q9BRP9 147 aa10.53□□□□□ -0.72
PDZRN3-201ENST00000263666 PSPHP1O15172 72 aa10.53□□□□□ -0.72
PDZRN3-201ENST00000263666 K7EQZ3 153 aa10.52□□□□□ -0.72
PDZRN3-201ENST00000263666 H3BNG1 76 aa10.52□□□□□ -0.73
PDZRN3-201ENST00000263666 LINC00476Q8WZB0 136 aa10.52□□□□□ -0.73
PDZRN3-201ENST00000263666 B9D2Q9BPU9 175 aa10.52□□□□□ -0.73
PDZRN3-201ENST00000263666 IGKV4-1P06312 121 aa10.51□□□□□ -0.73
PDZRN3-201ENST00000263666 PHF5AQ7RTV0 110 aaKnown RBP10.5□□□□□ -0.73
PDZRN3-201ENST00000263666 SPINK6Q6UWN8 80 aa10.5□□□□□ -0.73
PDZRN3-201ENST00000263666 Q8NBF4 154 aa10.5□□□□□ -0.73
PDZRN3-201ENST00000263666 A0A1W2PNM2 257 aa10.49□□□□□ -0.73
PDZRN3-201ENST00000263666 KCNQ1DNQ9H478 68 aa10.49□□□□□ -0.73
PDZRN3-201ENST00000263666 NDUFB1O75438 58 aa10.47□□□□□ -0.73
PDZRN3-201ENST00000263666 IGLV1-50A0A075B6I6 118 aa10.46□□□□□ -0.74
PDZRN3-201ENST00000263666 KLKP1Q107X0 134 aa10.46□□□□□ -0.74
PDZRN3-201ENST00000263666 DNAH10OSP0CZ25 163 aa10.45□□□□□ -0.74
PDZRN3-201ENST00000263666 HCG22E2RYF7 251 aa10.45□□□□□ -0.74
PDZRN3-201ENST00000263666 LINC00336Q6ZUF6 198 aa10.44□□□□□ -0.74
PDZRN3-201ENST00000263666 PCOTHQ58A44 107 aa10.44□□□□□ -0.74
PDZRN3-201ENST00000263666 TENM2Q9NT68 2774 aa10.43□□□□□ -0.74
PDZRN3-201ENST00000263666 WIPF1O43516 503 aa10.41□□□□□ -0.74
PDZRN3-201ENST00000263666 CASC2Q6XLA1 102 aa10.41□□□□□ -0.74
PDZRN3-201ENST00000263666 ATP5EP56381 51 aaPredicted RBP10.4□□□□□ -0.74
PDZRN3-201ENST00000263666 SPTSSBQ8NFR3 76 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms