RNA–Protein interactions for RNA: ENST00000263511.8

CROCCP3-201, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CROCCP3, Length 5,368 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-201ENST00000263511 USP24Q9UPU5 2620 aa11.11□□□□□ -0.63
CROCCP3-201ENST00000263511 SSBP3-AS1Q7Z2R9 100 aa11.11□□□□□ -0.63
CROCCP3-201ENST00000263511 K7EQZ3 153 aa11.1□□□□□ -0.63
CROCCP3-201ENST00000263511 LINC00304Q8N9R0 145 aa11.09□□□□□ -0.63
CROCCP3-201ENST00000263511 C9orf163Q8N9P6 203 aa11.09□□□□□ -0.63
CROCCP3-201ENST00000263511 IGFL1Q6UW32 110 aa11.08□□□□□ -0.63
CROCCP3-201ENST00000263511 TLX1NBP0CAT3 122 aa11.06□□□□□ -0.64
CROCCP3-201ENST00000263511 C9orf129Q5T035 196 aaKnown RBP11.06□□□□□ -0.64
CROCCP3-201ENST00000263511 COX6B2Q6YFQ2 88 aa11.04□□□□□ -0.64
CROCCP3-201ENST00000263511 PLA2G2DQ9UNK4 145 aa11.04□□□□□ -0.64
CROCCP3-201ENST00000263511 IGLV8-61A0A075B6I0 122 aa11.02□□□□□ -0.64
CROCCP3-201ENST00000263511 LINC00336Q6ZUF6 198 aa11.02□□□□□ -0.65
CROCCP3-201ENST00000263511 C8orf17Q9NRJ1 99 aa11.02□□□□□ -0.65
CROCCP3-201ENST00000263511 EIF4EBP3O60516 100 aaPredicted RBP11.02□□□□□ -0.65
CROCCP3-201ENST00000263511 DSCR10P59022 87 aa11.02□□□□□ -0.65
CROCCP3-201ENST00000263511 KRTAP1-3Q8IUG1 177 aa11.02□□□□□ -0.65
CROCCP3-201ENST00000263511 PRR15Q8IV56 129 aa11.01□□□□□ -0.65
CROCCP3-201ENST00000263511 ERC2-IT1O76042 136 aa11.01□□□□□ -0.65
CROCCP3-201ENST00000263511 Q8N377 158 aa11□□□□□ -0.65
CROCCP3-201ENST00000263511 SMR3BP02814 79 aaPredicted RBP11□□□□□ -0.65
CROCCP3-201ENST00000263511 APLNQ9ULZ1 77 aa11□□□□□ -0.65
CROCCP3-201ENST00000263511 A0A1B0GVX0 72 aa10.98□□□□□ -0.65
CROCCP3-201ENST00000263511 IGLV7-43P04211 117 aa10.97□□□□□ -0.65
CROCCP3-201ENST00000263511 OBSCN-AS1Q96MR7 158 aa10.97□□□□□ -0.65
CROCCP3-201ENST00000263511 KRTAP1-1Q07627 177 aa10.97□□□□□ -0.65
CROCCP3-201ENST00000263511 KLKP1Q107X0 134 aa10.96□□□□□ -0.66
CROCCP3-201ENST00000263511 CNBPP62633 177 aaKnown RBP10.95□□□□□ -0.66
CROCCP3-201ENST00000263511 ZNF575Q86XF7 245 aa10.95□□□□□ -0.66
CROCCP3-201ENST00000263511 LINC01600Q96MT4 127 aa10.94□□□□□ -0.66
CROCCP3-201ENST00000263511 C9orf92A6NGG3 77 aa10.94□□□□□ -0.66
CROCCP3-201ENST00000263511 COA5Q86WW8 74 aa10.94□□□□□ -0.66
CROCCP3-201ENST00000263511 PSORS1C2Q9UIG4 136 aa10.94□□□□□ -0.66
CROCCP3-201ENST00000263511 A0A1W2PNN7 141 aa10.93□□□□□ -0.66
CROCCP3-201ENST00000263511 A8MUN3 132 aa10.92□□□□□ -0.66
CROCCP3-201ENST00000263511 ANAPC11Q9NYG5 84 aa10.91□□□□□ -0.66
CROCCP3-201ENST00000263511 CASC10Q5T4H9 136 aa10.91□□□□□ -0.66
CROCCP3-201ENST00000263511 SPRR4Q96PI1 79 aa10.9□□□□□ -0.67
CROCCP3-201ENST00000263511 H7BZZ5 65 aa10.89□□□□□ -0.67
CROCCP3-201ENST00000263511 A0A0G2JQZ4 141 aa10.89□□□□□ -0.67
CROCCP3-201ENST00000263511 MAST4O15021 2626 aa10.87□□□□□ -0.67
CROCCP3-201ENST00000263511 ATRQ13535 2644 aa10.86□□□□□ -0.67
CROCCP3-201ENST00000263511 UQCR11O14957 56 aa10.86□□□□□ -0.67
CROCCP3-201ENST00000263511 CYP4F30PQ9H0H9 118 aa10.86□□□□□ -0.67
CROCCP3-201ENST00000263511 PRRC2CQ9Y520 2896 aaKnown RBP10.86□□□□□ -0.67
CROCCP3-201ENST00000263511 IGLV5-37A0A075B6J1 123 aa10.81□□□□□ -0.68
CROCCP3-201ENST00000263511 RBM12B-AS1Q9P1G2 102 aa10.8□□□□□ -0.68
CROCCP3-201ENST00000263511 FLNAP21333 2647 aaKnown RBP10.8□□□□□ -0.68
CROCCP3-201ENST00000263511 A0A1W2PNM2 257 aa10.78□□□□□ -0.68
CROCCP3-201ENST00000263511 HELZ2Q9BYK8 2649 aaKnown RBP10.77□□□□□ -0.68
CROCCP3-201ENST00000263511 CD164Q04900 197 aa10.76□□□□□ -0.69
CROCCP3-201ENST00000263511 TNP2Q05952 138 aa10.74□□□□□ -0.69
CROCCP3-201ENST00000263511 SPINT4Q6UDR6 99 aa10.74□□□□□ -0.69
CROCCP3-201ENST00000263511 ITPR3Q14573 2671 aa10.73□□□□□ -0.69
CROCCP3-201ENST00000263511 BPTFQ12830 3046 aa10.73□□□□□ -0.69
CROCCP3-201ENST00000263511 MIR22HGQ0VDD5 57 aa10.72□□□□□ -0.69
CROCCP3-201ENST00000263511 IGLV5-48A0A075B6I7 105 aa10.71□□□□□ -0.69
CROCCP3-201ENST00000263511 CRIPTQ9P021 101 aa10.69□□□□□ -0.7
CROCCP3-201ENST00000263511 WIPF1O43516 503 aa10.67□□□□□ -0.7
CROCCP3-201ENST00000263511 KTN1-AS1Q86SY8 53 aa10.66□□□□□ -0.7
CROCCP3-201ENST00000263511 FAM104AQ969W3 186 aa10.64□□□□□ -0.71
CROCCP3-201ENST00000263511 Q8N1X5 172 aa10.63□□□□□ -0.71
CROCCP3-201ENST00000263511 SPANXA2-OT1Q8N9U9 137 aa10.62□□□□□ -0.71
CROCCP3-201ENST00000263511 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.62□□□□□ -0.71
CROCCP3-201ENST00000263511 LINC01554Q52M75 96 aa10.59□□□□□ -0.71
CROCCP3-201ENST00000263511 Q6ZSA8 131 aa10.59□□□□□ -0.71
CROCCP3-201ENST00000263511 CFAP46Q8IYW2 2715 aa10.58□□□□□ -0.72
CROCCP3-201ENST00000263511 DNAH12Q6ZR08 3092 aa10.58□□□□□ -0.72
CROCCP3-201ENST00000263511 IGLV7-46A0A075B6I9 117 aa10.57□□□□□ -0.72
CROCCP3-201ENST00000263511 LCA10Q71F78 164 aa10.57□□□□□ -0.72
CROCCP3-201ENST00000263511 PRR26Q8N8Z3 221 aa10.57□□□□□ -0.72
CROCCP3-201ENST00000263511 UTRNP46939 3433 aa10.57□□□□□ -0.72
CROCCP3-201ENST00000263511 FAM229BQ4G0N7 80 aa10.55□□□□□ -0.72
CROCCP3-201ENST00000263511 STAB1Q9NY15 2570 aa10.54□□□□□ -0.72
CROCCP3-201ENST00000263511 CEP350Q5VT06 3117 aa10.52□□□□□ -0.73
CROCCP3-201ENST00000263511 A0A0D9SG42 100 aa10.52□□□□□ -0.73
CROCCP3-201ENST00000263511 OCR1Q9BZK8 76 aa10.51□□□□□ -0.73
CROCCP3-201ENST00000263511 CR1P17927 2039 aa10.51□□□□□ -0.73
CROCCP3-201ENST00000263511 PLAC8Q9NZF1 115 aa10.5□□□□□ -0.73
CROCCP3-201ENST00000263511 Q1T7F1 81 aa10.5□□□□□ -0.73
CROCCP3-201ENST00000263511 CDC42SE1Q9NRR8 79 aa10.49□□□□□ -0.73
CROCCP3-201ENST00000263511 Q5XG85 94 aa10.48□□□□□ -0.73
CROCCP3-201ENST00000263511 CENPEQ02224 2701 aa10.45□□□□□ -0.74
CROCCP3-201ENST00000263511 CYSTM1Q9H1C7 97 aa10.43□□□□□ -0.74
CROCCP3-201ENST00000263511 SPRR1AP35321 89 aa10.4□□□□□ -0.75
CROCCP3-201ENST00000263511 PCNTO95613 3336 aa10.38□□□□□ -0.75
CROCCP3-201ENST00000263511 M0R2T5 61 aa10.37□□□□□ -0.75
CROCCP3-201ENST00000263511 HRES1P13985 223 aa10.37□□□□□ -0.75
CROCCP3-201ENST00000263511 FP248Q71RG6 208 aaPredicted RBP10.37□□□□□ -0.75
CROCCP3-201ENST00000263511 ZCCHC13Q8WW36 166 aaKnown RBP10.35□□□□□ -0.75
CROCCP3-201ENST00000263511 SETXQ7Z333 2677 aaKnown RBP10.33□□□□□ -0.76
CROCCP3-201ENST00000263511 MMP24-AS1A0A0U1RRL7 71 aa10.33□□□□□ -0.76
CROCCP3-201ENST00000263511 TEP1Q99973 2627 aaKnown RBP10.33□□□□□ -0.76
CROCCP3-201ENST00000263511 CAMK2N1Q7Z7J9 78 aa10.32□□□□□ -0.76
CROCCP3-201ENST00000263511 SPRR1BP22528 89 aa10.31□□□□□ -0.76
CROCCP3-201ENST00000263511 Q8NDZ9 215 aa10.31□□□□□ -0.76
CROCCP3-201ENST00000263511 A0A1B0GU33 70 aa10.3□□□□□ -0.76
CROCCP3-201ENST00000263511 AKAP13Q12802 2813 aa10.3□□□□□ -0.76
CROCCP3-201ENST00000263511 KRTAP1-5Q9BYS1 174 aa10.28□□□□□ -0.76
CROCCP3-201ENST00000263511 Q75L30 129 aa10.28□□□□□ -0.76
CROCCP3-201ENST00000263511 CSAG1Q6PB30 78 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms