RNA–Protein interactions for RNA: ENST00000263102.6

CCDC6-201, Transcript of coiled-coil domain containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC6, Length 5,811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-201ENST00000263102 CASC10Q5T4H9 136 aa9.71□□□□□ -0.85
CCDC6-201ENST00000263102 PRR15Q8IV56 129 aa9.71□□□□□ -0.86
CCDC6-201ENST00000263102 TNP2Q05952 138 aa9.69□□□□□ -0.86
CCDC6-201ENST00000263102 C9orf163Q8N9P6 203 aa9.69□□□□□ -0.86
CCDC6-201ENST00000263102 C10orf142B7Z368 130 aa9.69□□□□□ -0.86
CCDC6-201ENST00000263102 LINC00483Q53H64 154 aa9.69□□□□□ -0.86
CCDC6-201ENST00000263102 PRR26Q8N8Z3 221 aa9.68□□□□□ -0.86
CCDC6-201ENST00000263102 TLN1Q9Y490 2541 aaKnown RBP9.68□□□□□ -0.86
CCDC6-201ENST00000263102 LUZP6Q538Z0 58 aa9.67□□□□□ -0.86
CCDC6-201ENST00000263102 LINC00612Q8N6U2 182 aa9.67□□□□□ -0.86
CCDC6-201ENST00000263102 FAM104AQ969W3 186 aa9.66□□□□□ -0.86
CCDC6-201ENST00000263102 SMCPP49901 116 aaPredicted RBP9.65□□□□□ -0.86
CCDC6-201ENST00000263102 SPRR4Q96PI1 79 aa9.65□□□□□ -0.86
CCDC6-201ENST00000263102 PCNTO95613 3336 aa9.65□□□□□ -0.86
CCDC6-201ENST00000263102 WDR87Q6ZQQ6 2873 aa9.63□□□□□ -0.87
CCDC6-201ENST00000263102 ZFYVE26Q68DK2 2539 aa9.63□□□□□ -0.87
CCDC6-201ENST00000263102 Q8N377 158 aa9.62□□□□□ -0.87
CCDC6-201ENST00000263102 PLA2G2DQ9UNK4 145 aa9.62□□□□□ -0.87
CCDC6-201ENST00000263102 PIEZO1Q92508 2521 aa9.6□□□□□ -0.87
CCDC6-201ENST00000263102 ABCA12Q86UK0 2595 aa9.59□□□□□ -0.87
CCDC6-201ENST00000263102 FN1P02751 2386 aaKnown RBP9.59□□□□□ -0.87
CCDC6-201ENST00000263102 EP400Q96L91 3159 aa9.57□□□□□ -0.88
CCDC6-201ENST00000263102 ERC2-IT1O76042 136 aa9.57□□□□□ -0.88
CCDC6-201ENST00000263102 CENPFP49454 3210 aa9.56□□□□□ -0.88
CCDC6-201ENST00000263102 CYP4F30PQ9H0H9 118 aa9.55□□□□□ -0.88
CCDC6-201ENST00000263102 TLX1NBP0CAT3 122 aa9.55□□□□□ -0.88
CCDC6-201ENST00000263102 PRR34Q9NV39 138 aa9.55□□□□□ -0.88
CCDC6-201ENST00000263102 ZNF462Q96JM2 2506 aa9.54□□□□□ -0.88
CCDC6-201ENST00000263102 UTRNP46939 3433 aa9.54□□□□□ -0.88
CCDC6-201ENST00000263102 LITAFQ99732 161 aa9.53□□□□□ -0.88
CCDC6-201ENST00000263102 F8P00451 2351 aa9.5□□□□□ -0.89
CCDC6-201ENST00000263102 CNBPP62633 177 aaKnown RBP9.5□□□□□ -0.89
CCDC6-201ENST00000263102 S4R3F8 94 aa9.5□□□□□ -0.89
CCDC6-201ENST00000263102 HRES1P13985 223 aa9.49□□□□□ -0.89
CCDC6-201ENST00000263102 TLN2Q9Y4G6 2542 aa9.48□□□□□ -0.89
CCDC6-201ENST00000263102 CD164Q04900 197 aa9.48□□□□□ -0.89
CCDC6-201ENST00000263102 CEP350Q5VT06 3117 aa9.47□□□□□ -0.89
CCDC6-201ENST00000263102 Q5VSD8 79 aa9.47□□□□□ -0.89
CCDC6-201ENST00000263102 GIG44P09565 113 aaPredicted RBP9.47□□□□□ -0.89
CCDC6-201ENST00000263102 PRO0461Q9UI25 63 aa9.46□□□□□ -0.9
CCDC6-201ENST00000263102 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.45□□□□□ -0.9
CCDC6-201ENST00000263102 RPS28P62857 69 aaKnown RBP9.44□□□□□ -0.9
CCDC6-201ENST00000263102 CSAG1Q6PB30 78 aa9.44□□□□□ -0.9
CCDC6-201ENST00000263102 EIF4EBP3O60516 100 aaPredicted RBP9.41□□□□□ -0.9
CCDC6-201ENST00000263102 Q1T7F1 81 aa9.39□□□□□ -0.91
CCDC6-201ENST00000263102 A0A096LNT2 108 aa9.39□□□□□ -0.91
CCDC6-201ENST00000263102 SEC61BP60468 96 aaKnown RBP9.38□□□□□ -0.91
CCDC6-201ENST00000263102 A0A1W2PNM2 257 aa9.38□□□□□ -0.91
CCDC6-201ENST00000263102 A0A1B0GU33 70 aa9.37□□□□□ -0.91
CCDC6-201ENST00000263102 R4GN34 69 aa9.36□□□□□ -0.91
CCDC6-201ENST00000263102 CHD8Q9HCK8 2581 aa9.35□□□□□ -0.91
CCDC6-201ENST00000263102 DNAH12Q6ZR08 3092 aa9.33□□□□□ -0.92
CCDC6-201ENST00000263102 PLAC4Q8WY50 150 aa9.33□□□□□ -0.92
CCDC6-201ENST00000263102 KRTAP1-3Q8IUG1 177 aa9.32□□□□□ -0.92
CCDC6-201ENST00000263102 WIPF1O43516 503 aa9.32□□□□□ -0.92
CCDC6-201ENST00000263102 ZCCHC13Q8WW36 166 aaKnown RBP9.3□□□□□ -0.92
CCDC6-201ENST00000263102 KRTAP1-1Q07627 177 aa9.28□□□□□ -0.92
CCDC6-201ENST00000263102 LCA10Q71F78 164 aa9.28□□□□□ -0.92
CCDC6-201ENST00000263102 USP9XQ93008 2570 aaPredicted RBP9.25□□□□□ -0.93
CCDC6-201ENST00000263102 KTN1-AS1Q86SY8 53 aa9.25□□□□□ -0.93
CCDC6-201ENST00000263102 KLK9Q2XQG4 91 aa9.25□□□□□ -0.93
CCDC6-201ENST00000263102 ACANP16112 2415 aa9.24□□□□□ -0.93
CCDC6-201ENST00000263102 SETD2Q9BYW2 2564 aaPredicted RBP9.23□□□□□ -0.93
CCDC6-201ENST00000263102 FAM229BQ4G0N7 80 aa9.23□□□□□ -0.93
CCDC6-201ENST00000263102 KLKP1Q107X0 134 aa9.21□□□□□ -0.93
CCDC6-201ENST00000263102 ANKRD17O75179 2603 aaKnown RBP9.2□□□□□ -0.94
CCDC6-201ENST00000263102 M0QZ58 72 aa9.2□□□□□ -0.94
CCDC6-201ENST00000263102 SPANXA2-OT1Q8N9U9 137 aa9.2□□□□□ -0.94
CCDC6-201ENST00000263102 PKD1L2Q7Z442 2459 aa9.19□□□□□ -0.94
CCDC6-201ENST00000263102 SPINK7P58062 85 aa9.18□□□□□ -0.94
CCDC6-201ENST00000263102 DMAC1Q96GE9 116 aa9.18□□□□□ -0.94
CCDC6-201ENST00000263102 LCE6AA0A183 80 aa9.18□□□□□ -0.94
CCDC6-201ENST00000263102 PLAC8Q9NZF1 115 aa9.18□□□□□ -0.94
CCDC6-201ENST00000263102 H7BZZ5 65 aa9.17□□□□□ -0.94
CCDC6-201ENST00000263102 H1FX-AS1Q4G0G2 97 aa9.17□□□□□ -0.94
CCDC6-201ENST00000263102 PCSK5Q92824 1860 aa9.17□□□□□ -0.94
CCDC6-201ENST00000263102 Q8N9P0 234 aaPredicted RBP9.17□□□□□ -0.94
CCDC6-201ENST00000263102 MTORP42345 2549 aa9.16□□□□□ -0.94
CCDC6-201ENST00000263102 POLQO75417 2590 aa9.15□□□□□ -0.95
CCDC6-201ENST00000263102 ANKRD11Q6UB99 2663 aaPredicted RBP9.12□□□□□ -0.95
CCDC6-201ENST00000263102 FASNP49327 2511 aaKnown RBP9.12□□□□□ -0.95
CCDC6-201ENST00000263102 PRRC2CQ9Y520 2896 aaKnown RBP9.11□□□□□ -0.95
CCDC6-201ENST00000263102 A0A0C4DFX4 3053 aa9.1□□□□□ -0.95
CCDC6-201ENST00000263102 KRTAP10-1P60331 282 aa9.1□□□□□ -0.95
CCDC6-201ENST00000263102 A0A0A0MQY5 61 aa9.08□□□□□ -0.96
CCDC6-201ENST00000263102 OXTP01178 125 aa9.08□□□□□ -0.96
CCDC6-201ENST00000263102 KRTAP10-2P60368 255 aa9.07□□□□□ -0.96
CCDC6-201ENST00000263102 Q5W150 140 aa9.06□□□□□ -0.96
CCDC6-201ENST00000263102 SPTBN4Q9H254 2564 aa9.05□□□□□ -0.96
CCDC6-201ENST00000263102 ADM2Q7Z4H4 148 aa9.04□□□□□ -0.96
CCDC6-201ENST00000263102 MMP24-AS1A0A0U1RRL7 71 aa9.02□□□□□ -0.97
CCDC6-201ENST00000263102 USP9YO00507 2555 aaPredicted RBP9□□□□□ -0.97
CCDC6-201ENST00000263102 CEP295Q9C0D2 2601 aa8.99□□□□□ -0.97
CCDC6-201ENST00000263102 PRAC1Q96KF2 57 aa8.98□□□□□ -0.97
CCDC6-201ENST00000263102 CR1P17927 2039 aa8.97□□□□□ -0.97
CCDC6-201ENST00000263102 OCR1Q9BZK8 76 aa8.96□□□□□ -0.97
CCDC6-201ENST00000263102 KRTAP1-5Q9BYS1 174 aa8.92□□□□□ -0.98
CCDC6-201ENST00000263102 RPL37P61927 97 aaKnown RBP8.9□□□□□ -0.98
CCDC6-201ENST00000263102 Q75L30 129 aa8.89□□□□□ -0.99
CCDC6-201ENST00000263102 BRCA2P51587 3418 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms