RNA–Protein interactions for RNA: ENST00000262795.5

SHANK3-201, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS P5 TSL 5 BASIC

Gene SHANK3, Length 7,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-201ENST00000262795 IGLV1-50A0A075B6I6 118 aa10.5□□□□□ -0.73
SHANK3-201ENST00000262795 MIR22HGQ0VDD5 57 aa10.5□□□□□ -0.73
SHANK3-201ENST00000262795 ZNF861PO60384 105 aa10.5□□□□□ -0.73
SHANK3-201ENST00000262795 Q6ZSA8 131 aa10.5□□□□□ -0.73
SHANK3-201ENST00000262795 C19orf73Q9NVV2 129 aa10.49□□□□□ -0.73
SHANK3-201ENST00000262795 KTN1-AS1Q86SY8 53 aa10.49□□□□□ -0.73
SHANK3-201ENST00000262795 SETD2Q9BYW2 2564 aaPredicted RBP10.47□□□□□ -0.73
SHANK3-201ENST00000262795 IGLV5-39A0A0G2JS06 123 aa10.47□□□□□ -0.73
SHANK3-201ENST00000262795 ZNF575Q86XF7 245 aa10.47□□□□□ -0.73
SHANK3-201ENST00000262795 USP9XQ93008 2570 aaPredicted RBP10.47□□□□□ -0.73
SHANK3-201ENST00000262795 LCA10Q71F78 164 aa10.47□□□□□ -0.73
SHANK3-201ENST00000262795 CSNK1G2-AS1Q8NCQ2 148 aa10.47□□□□□ -0.73
SHANK3-201ENST00000262795 IGLV7-43P04211 117 aa10.46□□□□□ -0.74
SHANK3-201ENST00000262795 PSORS1C2Q9UIG4 136 aa10.45□□□□□ -0.74
SHANK3-201ENST00000262795 ACANP16112 2415 aa10.44□□□□□ -0.74
SHANK3-201ENST00000262795 UQCR11O14957 56 aa10.44□□□□□ -0.74
SHANK3-201ENST00000262795 MTORP42345 2549 aa10.42□□□□□ -0.74
SHANK3-201ENST00000262795 MRPL34Q9BQ48 92 aaKnown RBP10.42□□□□□ -0.74
SHANK3-201ENST00000262795 IGLV7-46A0A075B6I9 117 aa10.41□□□□□ -0.74
SHANK3-201ENST00000262795 LUZP6Q538Z0 58 aa10.4□□□□□ -0.74
SHANK3-201ENST00000262795 ERC2-IT1O76042 136 aa10.38□□□□□ -0.75
SHANK3-201ENST00000262795 Q8N1X5 172 aa10.38□□□□□ -0.75
SHANK3-201ENST00000262795 PRR26Q8N8Z3 221 aa10.38□□□□□ -0.75
SHANK3-201ENST00000262795 LOC110117498A0A087WWA1 95 aa10.38□□□□□ -0.75
SHANK3-201ENST00000262795 PLA2G2DQ9UNK4 145 aa10.37□□□□□ -0.75
SHANK3-201ENST00000262795 A8MWP4 228 aa10.36□□□□□ -0.75
SHANK3-201ENST00000262795 TRBV7-4A0A0J9YYF1 115 aa10.35□□□□□ -0.75
SHANK3-201ENST00000262795 CYP4F30PQ9H0H9 118 aa10.35□□□□□ -0.75
SHANK3-201ENST00000262795 LOC101927531A0A1B0GV80 90 aa10.34□□□□□ -0.75
SHANK3-201ENST00000262795 IGFL1Q6UW32 110 aa10.34□□□□□ -0.75
SHANK3-201ENST00000262795 LITAFQ99732 161 aa10.34□□□□□ -0.75
SHANK3-201ENST00000262795 EIF4EBP3O60516 100 aaPredicted RBP10.32□□□□□ -0.76
SHANK3-201ENST00000262795 H3BPC8 53 aa10.32□□□□□ -0.76
SHANK3-201ENST00000262795 IGLV5-48A0A075B6I7 105 aa10.31□□□□□ -0.76
SHANK3-201ENST00000262795 KRTAP1-3Q8IUG1 177 aa10.3□□□□□ -0.76
SHANK3-201ENST00000262795 C9orf163Q8N9P6 203 aa10.29□□□□□ -0.76
SHANK3-201ENST00000262795 LINC00612Q8N6U2 182 aa10.29□□□□□ -0.76
SHANK3-201ENST00000262795 IGLV5-45A0A087WSX0 123 aa10.29□□□□□ -0.76
SHANK3-201ENST00000262795 CDC42SE1Q9NRR8 79 aa10.28□□□□□ -0.76
SHANK3-201ENST00000262795 PKD1L2Q7Z442 2459 aa10.28□□□□□ -0.76
SHANK3-201ENST00000262795 C8orf17Q9NRJ1 99 aa10.27□□□□□ -0.77
SHANK3-201ENST00000262795 PCNTO95613 3336 aa10.27□□□□□ -0.77
SHANK3-201ENST00000262795 A0A096LNT2 108 aa10.26□□□□□ -0.77
SHANK3-201ENST00000262795 Q5VSD8 79 aa10.24□□□□□ -0.77
SHANK3-201ENST00000262795 A0A1B0GVX0 72 aa10.24□□□□□ -0.77
SHANK3-201ENST00000262795 CEP295Q9C0D2 2601 aa10.23□□□□□ -0.77
SHANK3-201ENST00000262795 CAMK2N1Q7Z7J9 78 aa10.23□□□□□ -0.77
SHANK3-201ENST00000262795 KRTAP1-1Q07627 177 aa10.21□□□□□ -0.77
SHANK3-201ENST00000262795 A0A1B0GW54 56 aa10.2□□□□□ -0.78
SHANK3-201ENST00000262795 GIG44P09565 113 aaPredicted RBP10.2□□□□□ -0.78
SHANK3-201ENST00000262795 KCNQ1DNQ9H478 68 aa10.19□□□□□ -0.78
SHANK3-201ENST00000262795 H7BZZ5 65 aa10.19□□□□□ -0.78
SHANK3-201ENST00000262795 DNAH12Q6ZR08 3092 aa10.18□□□□□ -0.78
SHANK3-201ENST00000262795 SPRR4Q96PI1 79 aa10.18□□□□□ -0.78
SHANK3-201ENST00000262795 USP9YO00507 2555 aaPredicted RBP10.17□□□□□ -0.78
SHANK3-201ENST00000262795 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.16□□□□□ -0.78
SHANK3-201ENST00000262795 BPTFQ12830 3046 aa10.15□□□□□ -0.78
SHANK3-201ENST00000262795 PRR15Q8IV56 129 aa10.15□□□□□ -0.78
SHANK3-201ENST00000262795 Q8N377 158 aa10.14□□□□□ -0.79
SHANK3-201ENST00000262795 PRAC1Q96KF2 57 aa10.12□□□□□ -0.79
SHANK3-201ENST00000262795 C5orf42Q9H799 3197 aa10.12□□□□□ -0.79
SHANK3-201ENST00000262795 USP24Q9UPU5 2620 aa10.11□□□□□ -0.79
SHANK3-201ENST00000262795 PRR34Q9NV39 138 aa10.1□□□□□ -0.79
SHANK3-201ENST00000262795 HECTD1Q9ULT8 2610 aa10.1□□□□□ -0.79
SHANK3-201ENST00000262795 KLKP1Q107X0 134 aa10.07□□□□□ -0.8
SHANK3-201ENST00000262795 FAM229BQ4G0N7 80 aa10.05□□□□□ -0.8
SHANK3-201ENST00000262795 CNBPP62633 177 aaKnown RBP10.04□□□□□ -0.8
SHANK3-201ENST00000262795 A0A0A0MQY5 61 aa10.04□□□□□ -0.8
SHANK3-201ENST00000262795 Q1T7F1 81 aa10.03□□□□□ -0.8
SHANK3-201ENST00000262795 CEP350Q5VT06 3117 aa10.02□□□□□ -0.81
SHANK3-201ENST00000262795 TLX1NBP0CAT3 122 aa10□□□□□ -0.81
SHANK3-201ENST00000262795 FLNBO75369 2602 aaKnown RBP10□□□□□ -0.81
SHANK3-201ENST00000262795 FAM104AQ969W3 186 aa9.99□□□□□ -0.81
SHANK3-201ENST00000262795 LINC00483Q53H64 154 aa9.99□□□□□ -0.81
SHANK3-201ENST00000262795 MGAM2Q2M2H8 2515 aa9.99□□□□□ -0.81
SHANK3-201ENST00000262795 LCE6AA0A183 80 aa9.98□□□□□ -0.81
SHANK3-201ENST00000262795 CYSTM1Q9H1C7 97 aa9.97□□□□□ -0.81
SHANK3-201ENST00000262795 CSAG1Q6PB30 78 aa9.97□□□□□ -0.81
SHANK3-201ENST00000262795 S4R3F8 94 aa9.97□□□□□ -0.81
SHANK3-201ENST00000262795 EPG5Q9HCE0 2579 aa9.94□□□□□ -0.82
SHANK3-201ENST00000262795 Q5XG85 94 aa9.93□□□□□ -0.82
SHANK3-201ENST00000262795 CR1P17927 2039 aa9.93□□□□□ -0.82
SHANK3-201ENST00000262795 SEC61BP60468 96 aaKnown RBP9.93□□□□□ -0.82
SHANK3-201ENST00000262795 KRTAP10-2P60368 255 aa9.88□□□□□ -0.83
SHANK3-201ENST00000262795 KRTAP10-1P60331 282 aa9.86□□□□□ -0.83
SHANK3-201ENST00000262795 SPINK7P58062 85 aa9.85□□□□□ -0.83
SHANK3-201ENST00000262795 HRES1P13985 223 aa9.84□□□□□ -0.83
SHANK3-201ENST00000262795 A0A1W2PNM2 257 aa9.8□□□□□ -0.84
SHANK3-201ENST00000262795 SPANXA2-OT1Q8N9U9 137 aa9.79□□□□□ -0.84
SHANK3-201ENST00000262795 R4GN34 69 aa9.79□□□□□ -0.84
SHANK3-201ENST00000262795 A0A1B0GU33 70 aa9.77□□□□□ -0.84
SHANK3-201ENST00000262795 PLAC4Q8WY50 150 aa9.77□□□□□ -0.85
SHANK3-201ENST00000262795 KLK9Q2XQG4 91 aa9.76□□□□□ -0.85
SHANK3-201ENST00000262795 FP248Q71RG6 208 aaPredicted RBP9.75□□□□□ -0.85
SHANK3-201ENST00000262795 PLAC8Q9NZF1 115 aa9.75□□□□□ -0.85
SHANK3-201ENST00000262795 OCR1Q9BZK8 76 aa9.75□□□□□ -0.85
SHANK3-201ENST00000262795 ZCCHC13Q8WW36 166 aaKnown RBP9.72□□□□□ -0.85
SHANK3-201ENST00000262795 Q75L30 129 aa9.71□□□□□ -0.85
SHANK3-201ENST00000262795 OXTP01178 125 aa9.71□□□□□ -0.85
SHANK3-201ENST00000262795 PRRC2CQ9Y520 2896 aaKnown RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms