RNA–Protein interactions for RNA: ENST00000262676.9

TTC39A-202, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 2 BASIC

Gene TTC39A, Length 6,287 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-202ENST00000262676 FAM168BA1KXE4 195 aa8.67□□□□□ -1.02
TTC39A-202ENST00000262676 LCA10Q71F78 164 aa8.67□□□□□ -1.02
TTC39A-202ENST00000262676 LINC00336Q6ZUF6 198 aa8.66□□□□□ -1.02
TTC39A-202ENST00000262676 IGLV5-45A0A087WSX0 123 aa8.66□□□□□ -1.02
TTC39A-202ENST00000262676 LINC01554Q52M75 96 aa8.66□□□□□ -1.02
TTC39A-202ENST00000262676 C5orf42Q9H799 3197 aa8.65□□□□□ -1.02
TTC39A-202ENST00000262676 LINC00588Q9Y4M8 146 aa8.65□□□□□ -1.03
TTC39A-202ENST00000262676 COL27A1Q8IZC6 1860 aaPredicted RBP8.65□□□□□ -1.03
TTC39A-202ENST00000262676 C9orf92A6NGG3 77 aa8.65□□□□□ -1.03
TTC39A-202ENST00000262676 ERC2-IT1O76042 136 aa8.63□□□□□ -1.03
TTC39A-202ENST00000262676 CDC42SE1Q9NRR8 79 aa8.62□□□□□ -1.03
TTC39A-202ENST00000262676 KRTAP10-3P60369 221 aa8.61□□□□□ -1.03
TTC39A-202ENST00000262676 LUZP6Q538Z0 58 aa8.6□□□□□ -1.03
TTC39A-202ENST00000262676 OBSCN-AS1Q96MR7 158 aa8.6□□□□□ -1.03
TTC39A-202ENST00000262676 PRRC2CQ9Y520 2896 aaKnown RBP8.6□□□□□ -1.03
TTC39A-202ENST00000262676 DNAH10OSP0CZ25 163 aa8.59□□□□□ -1.03
TTC39A-202ENST00000262676 C8orf17Q9NRJ1 99 aa8.59□□□□□ -1.03
TTC39A-202ENST00000262676 RBM12B-AS1Q9P1G2 102 aa8.59□□□□□ -1.03
TTC39A-202ENST00000262676 Q8NAQ8 132 aa8.58□□□□□ -1.04
TTC39A-202ENST00000262676 HELZ2Q9BYK8 2649 aaKnown RBP8.58□□□□□ -1.04
TTC39A-202ENST00000262676 LINC00304Q8N9R0 145 aa8.57□□□□□ -1.04
TTC39A-202ENST00000262676 H3BNG1 76 aa8.57□□□□□ -1.04
TTC39A-202ENST00000262676 IGLV5-37A0A075B6J1 123 aa8.57□□□□□ -1.04
TTC39A-202ENST00000262676 ATRQ13535 2644 aa8.56□□□□□ -1.04
TTC39A-202ENST00000262676 IGFL1Q6UW32 110 aa8.56□□□□□ -1.04
TTC39A-202ENST00000262676 MAST4O15021 2626 aa8.56□□□□□ -1.04
TTC39A-202ENST00000262676 A0A0G2JQZ4 141 aa8.56□□□□□ -1.04
TTC39A-202ENST00000262676 A0A1W2PNN7 141 aa8.56□□□□□ -1.04
TTC39A-202ENST00000262676 GVQW2A0A096LPI5 108 aaPredicted RBP8.55□□□□□ -1.04
TTC39A-202ENST00000262676 PCSK5Q92824 1860 aa8.54□□□□□ -1.04
TTC39A-202ENST00000262676 LITAFQ99732 161 aa8.54□□□□□ -1.04
TTC39A-202ENST00000262676 PRR15Q8IV56 129 aa8.54□□□□□ -1.04
TTC39A-202ENST00000262676 M0R2T5 61 aa8.52□□□□□ -1.04
TTC39A-202ENST00000262676 A0A1B0GVX0 72 aa8.52□□□□□ -1.05
TTC39A-202ENST00000262676 IGLV1-50A0A075B6I6 118 aa8.52□□□□□ -1.05
TTC39A-202ENST00000262676 ZNF575Q86XF7 245 aa8.51□□□□□ -1.05
TTC39A-202ENST00000262676 BPTFQ12830 3046 aa8.51□□□□□ -1.05
TTC39A-202ENST00000262676 MKI67P46013 3256 aaKnown RBP8.51□□□□□ -1.05
TTC39A-202ENST00000262676 KLKP1Q107X0 134 aa8.5□□□□□ -1.05
TTC39A-202ENST00000262676 IGLV5-48A0A075B6I7 105 aa8.5□□□□□ -1.05
TTC39A-202ENST00000262676 H7BZZ5 65 aa8.5□□□□□ -1.05
TTC39A-202ENST00000262676 RANBP2P49792 3224 aaKnown RBP8.5□□□□□ -1.05
TTC39A-202ENST00000262676 Q8N1X5 172 aa8.5□□□□□ -1.05
TTC39A-202ENST00000262676 LAMA3Q16787 3333 aa8.48□□□□□ -1.05
TTC39A-202ENST00000262676 KRTAP1-3Q8IUG1 177 aa8.48□□□□□ -1.05
TTC39A-202ENST00000262676 FAM104AQ969W3 186 aa8.48□□□□□ -1.05
TTC39A-202ENST00000262676 A0A096LNT2 108 aa8.46□□□□□ -1.05
TTC39A-202ENST00000262676 CFAP46Q8IYW2 2715 aa8.46□□□□□ -1.05
TTC39A-202ENST00000262676 WIPF1O43516 503 aa8.46□□□□□ -1.05
TTC39A-202ENST00000262676 BRCA2P51587 3418 aa8.46□□□□□ -1.06
TTC39A-202ENST00000262676 ANAPC11Q9NYG5 84 aa8.46□□□□□ -1.06
TTC39A-202ENST00000262676 SETXQ7Z333 2677 aaKnown RBP8.45□□□□□ -1.06
TTC39A-202ENST00000262676 KCNQ1DNQ9H478 68 aa8.45□□□□□ -1.06
TTC39A-202ENST00000262676 A0A0C4DFX4 3053 aa8.45□□□□□ -1.06
TTC39A-202ENST00000262676 Q8N377 158 aa8.44□□□□□ -1.06
TTC39A-202ENST00000262676 LINC00528Q8N1L1 170 aa8.44□□□□□ -1.06
TTC39A-202ENST00000262676 KRTAP1-1Q07627 177 aa8.41□□□□□ -1.06
TTC39A-202ENST00000262676 EIF4EBP3O60516 100 aaPredicted RBP8.41□□□□□ -1.06
TTC39A-202ENST00000262676 ITPR3Q14573 2671 aa8.41□□□□□ -1.06
TTC39A-202ENST00000262676 H3BS24 57 aa8.4□□□□□ -1.06
TTC39A-202ENST00000262676 Q1T7F1 81 aa8.4□□□□□ -1.06
TTC39A-202ENST00000262676 C19orf73Q9NVV2 129 aa8.4□□□□□ -1.06
TTC39A-202ENST00000262676 CHD7Q9P2D1 2997 aa8.39□□□□□ -1.07
TTC39A-202ENST00000262676 C15orf56Q8N910 161 aa8.39□□□□□ -1.07
TTC39A-202ENST00000262676 CSNK1G2-AS1Q8NCQ2 148 aa8.39□□□□□ -1.07
TTC39A-202ENST00000262676 FLNAP21333 2647 aaKnown RBP8.39□□□□□ -1.07
TTC39A-202ENST00000262676 TEP1Q99973 2627 aaKnown RBP8.39□□□□□ -1.07
TTC39A-202ENST00000262676 LINC00483Q53H64 154 aa8.38□□□□□ -1.07
TTC39A-202ENST00000262676 ZNF861PO60384 105 aa8.37□□□□□ -1.07
TTC39A-202ENST00000262676 C9orf163Q8N9P6 203 aa8.37□□□□□ -1.07
TTC39A-202ENST00000262676 Q6ZSA8 131 aa8.37□□□□□ -1.07
TTC39A-202ENST00000262676 PRUNE2Q8WUY3 3088 aa8.36□□□□□ -1.07
TTC39A-202ENST00000262676 A0A087WTM6 91 aa8.36□□□□□ -1.07
TTC39A-202ENST00000262676 CASC10Q5T4H9 136 aa8.34□□□□□ -1.07
TTC39A-202ENST00000262676 SPANXA2-OT1Q8N9U9 137 aa8.34□□□□□ -1.07
TTC39A-202ENST00000262676 CAMK2N1Q7Z7J9 78 aa8.33□□□□□ -1.08
TTC39A-202ENST00000262676 CENPEQ02224 2701 aa8.32□□□□□ -1.08
TTC39A-202ENST00000262676 PRR26Q8N8Z3 221 aa8.32□□□□□ -1.08
TTC39A-202ENST00000262676 BAHCC1Q9P281 2608 aa8.32□□□□□ -1.08
TTC39A-202ENST00000262676 PRAC1Q96KF2 57 aa8.29□□□□□ -1.08
TTC39A-202ENST00000262676 TNP2Q05952 138 aa8.28□□□□□ -1.08
TTC39A-202ENST00000262676 A0A1W2PNM2 257 aa8.27□□□□□ -1.09
TTC39A-202ENST00000262676 A0A0A0MQY5 61 aa8.27□□□□□ -1.09
TTC39A-202ENST00000262676 IGLV7-43P04211 117 aa8.27□□□□□ -1.09
TTC39A-202ENST00000262676 A0A1B0GU33 70 aa8.26□□□□□ -1.09
TTC39A-202ENST00000262676 HTTP42858 3142 aa8.26□□□□□ -1.09
TTC39A-202ENST00000262676 PSORS1C2Q9UIG4 136 aa8.24□□□□□ -1.09
TTC39A-202ENST00000262676 SPRR4Q96PI1 79 aa8.23□□□□□ -1.09
TTC39A-202ENST00000262676 IGLV7-46A0A075B6I9 117 aa8.23□□□□□ -1.09
TTC39A-202ENST00000262676 GIG44P09565 113 aaPredicted RBP8.22□□□□□ -1.09
TTC39A-202ENST00000262676 XIRP2A4UGR9 3374 aa8.21□□□□□ -1.09
TTC39A-202ENST00000262676 PLA2G2DQ9UNK4 145 aa8.21□□□□□ -1.09
TTC39A-202ENST00000262676 PRR34Q9NV39 138 aa8.2□□□□□ -1.1
TTC39A-202ENST00000262676 TLX1NBP0CAT3 122 aa8.2□□□□□ -1.1
TTC39A-202ENST00000262676 Q75L30 129 aa8.19□□□□□ -1.1
TTC39A-202ENST00000262676 CSAG1Q6PB30 78 aa8.19□□□□□ -1.1
TTC39A-202ENST00000262676 FAM229BQ4G0N7 80 aa8.19□□□□□ -1.1
TTC39A-202ENST00000262676 MGAQ8IWI9 3026 aa8.18□□□□□ -1.1
TTC39A-202ENST00000262676 HRES1P13985 223 aa8.16□□□□□ -1.1
TTC39A-202ENST00000262676 OCR1Q9BZK8 76 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms