RNA–Protein interactions for RNA: ENST00000262305.8

RAB11FIP3-201, Transcript of RAB11 family interacting protein 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RAB11FIP3, Length 4,831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-201ENST00000262305 CFAP54Q96N23 3096 aa14.41□□□□□ -0.1
RAB11FIP3-201ENST00000262305 C9orf129Q5T035 196 aaKnown RBP14.39□□□□□ -0.11
RAB11FIP3-201ENST00000262305 TLX1NBP0CAT3 122 aa14.38□□□□□ -0.11
RAB11FIP3-201ENST00000262305 LAMA2P24043 3122 aaKnown RBP14.38□□□□□ -0.11
RAB11FIP3-201ENST00000262305 A0A0C4DFX4 3053 aa14.37□□□□□ -0.11
RAB11FIP3-201ENST00000262305 IGKV2D-30A0A075B6S6 120 aa14.36□□□□□ -0.11
RAB11FIP3-201ENST00000262305 IGKV2-30P06310 120 aa14.36□□□□□ -0.11
RAB11FIP3-201ENST00000262305 PRUNE2Q8WUY3 3088 aa14.35□□□□□ -0.11
RAB11FIP3-201ENST00000262305 H3BPC8 53 aa14.34□□□□□ -0.11
RAB11FIP3-201ENST00000262305 WDFY4Q6ZS81 3184 aa14.34□□□□□ -0.11
RAB11FIP3-201ENST00000262305 PSPHP1O15172 72 aa14.34□□□□□ -0.11
RAB11FIP3-201ENST00000262305 PLA2G2DQ9UNK4 145 aa14.34□□□□□ -0.11
RAB11FIP3-201ENST00000262305 SPINK1P00995 79 aa14.33□□□□□ -0.11
RAB11FIP3-201ENST00000262305 C9orf163Q8N9P6 203 aa14.33□□□□□ -0.12
RAB11FIP3-201ENST00000262305 TYMSOSQ8TAI1 123 aa14.31□□□□□ -0.12
RAB11FIP3-201ENST00000262305 TRAV22A0A0B4J277 110 aa14.31□□□□□ -0.12
RAB11FIP3-201ENST00000262305 RPL37AP61513 92 aaKnown RBP14.31□□□□□ -0.12
RAB11FIP3-201ENST00000262305 Q8N377 158 aa14.29□□□□□ -0.12
RAB11FIP3-201ENST00000262305 A8MWP4 228 aa14.27□□□□□ -0.13
RAB11FIP3-201ENST00000262305 A0A087WTM6 91 aa14.26□□□□□ -0.13
RAB11FIP3-201ENST00000262305 FAM229AH3BQW9 127 aa14.26□□□□□ -0.13
RAB11FIP3-201ENST00000262305 LINC00313P59037 77 aa14.26□□□□□ -0.13
RAB11FIP3-201ENST00000262305 IGFL1Q6UW32 110 aa14.25□□□□□ -0.13
RAB11FIP3-201ENST00000262305 K7EQZ3 153 aa14.25□□□□□ -0.13
RAB11FIP3-201ENST00000262305 RPS28P62857 69 aaKnown RBP14.24□□□□□ -0.13
RAB11FIP3-201ENST00000262305 C1orf195Q5TG92 126 aa14.24□□□□□ -0.13
RAB11FIP3-201ENST00000262305 APLNQ9ULZ1 77 aa14.23□□□□□ -0.13
RAB11FIP3-201ENST00000262305 CASC10Q5T4H9 136 aa14.23□□□□□ -0.13
RAB11FIP3-201ENST00000262305 AKAP13Q12802 2813 aa14.21□□□□□ -0.13
RAB11FIP3-201ENST00000262305 UNC80Q8N2C7 3258 aa14.21□□□□□ -0.13
RAB11FIP3-201ENST00000262305 PMAIP1Q13794 54 aa14.2□□□□□ -0.14
RAB11FIP3-201ENST00000262305 WIPF1O43516 503 aa14.2□□□□□ -0.14
RAB11FIP3-201ENST00000262305 CNBPP62633 177 aaKnown RBP14.2□□□□□ -0.14
RAB11FIP3-201ENST00000262305 ZNF861PO60384 105 aa14.2□□□□□ -0.14
RAB11FIP3-201ENST00000262305 FAM104AQ969W3 186 aa14.19□□□□□ -0.14
RAB11FIP3-201ENST00000262305 DSPP15924 2871 aaKnown RBP14.19□□□□□ -0.14
RAB11FIP3-201ENST00000262305 ACYP2P14621 99 aa14.18□□□□□ -0.14
RAB11FIP3-201ENST00000262305 TEP1Q99973 2627 aaKnown RBP14.18□□□□□ -0.14
RAB11FIP3-201ENST00000262305 CR1P17927 2039 aa14.17□□□□□ -0.14
RAB11FIP3-201ENST00000262305 ERC2-IT1O76042 136 aa14.17□□□□□ -0.14
RAB11FIP3-201ENST00000262305 C7orf65Q6ZTY9 151 aa14.17□□□□□ -0.14
RAB11FIP3-201ENST00000262305 C8orf87E5RJ46 101 aa14.16□□□□□ -0.14
RAB11FIP3-201ENST00000262305 CHD6Q8TD26 2715 aa14.16□□□□□ -0.14
RAB11FIP3-201ENST00000262305 PLA2G1BP04054 148 aaKnown RBP14.16□□□□□ -0.14
RAB11FIP3-201ENST00000262305 A0A1W2PNN7 141 aa14.16□□□□□ -0.14
RAB11FIP3-201ENST00000262305 SSBP3-AS1Q7Z2R9 100 aa14.13□□□□□ -0.15
RAB11FIP3-201ENST00000262305 MRPL34Q9BQ48 92 aaKnown RBP14.13□□□□□ -0.15
RAB11FIP3-201ENST00000262305 TRIOO75962 3097 aa14.13□□□□□ -0.15
RAB11FIP3-201ENST00000262305 PRR15Q8IV56 129 aa14.11□□□□□ -0.15
RAB11FIP3-201ENST00000262305 LOC101927531A0A1B0GV80 90 aa14.1□□□□□ -0.15
RAB11FIP3-201ENST00000262305 IGLV5-37A0A075B6J1 123 aa14.08□□□□□ -0.15
RAB11FIP3-201ENST00000262305 TEX15Q9BXT5 2789 aa14.08□□□□□ -0.15
RAB11FIP3-201ENST00000262305 UNC79Q9P2D8 2635 aa14.07□□□□□ -0.16
RAB11FIP3-201ENST00000262305 IGSF10Q6WRI0 2623 aa14.06□□□□□ -0.16
RAB11FIP3-201ENST00000262305 A0A0G2JQZ4 141 aa14.06□□□□□ -0.16
RAB11FIP3-201ENST00000262305 Q96NJ1 140 aa14.05□□□□□ -0.16
RAB11FIP3-201ENST00000262305 STAB1Q9NY15 2570 aa14.05□□□□□ -0.16
RAB11FIP3-201ENST00000262305 A0A1B0GU69 56 aa14.05□□□□□ -0.16
RAB11FIP3-201ENST00000262305 XIRP2A4UGR9 3374 aa14.04□□□□□ -0.16
RAB11FIP3-201ENST00000262305 C8orf17Q9NRJ1 99 aa14.04□□□□□ -0.16
RAB11FIP3-201ENST00000262305 LINC01600Q96MT4 127 aa14.04□□□□□ -0.16
RAB11FIP3-201ENST00000262305 A0A1W2PNM2 257 aa14.03□□□□□ -0.16
RAB11FIP3-201ENST00000262305 PSORS1C2Q9UIG4 136 aa14.03□□□□□ -0.16
RAB11FIP3-201ENST00000262305 MAP1AP78559 2803 aaPredicted RBP14.03□□□□□ -0.16
RAB11FIP3-201ENST00000262305 VPS13AQ96RL7 3174 aa14.03□□□□□ -0.16
RAB11FIP3-201ENST00000262305 KLKP1Q107X0 134 aa14.01□□□□□ -0.17
RAB11FIP3-201ENST00000262305 SPAG11AQ6PDA7 123 aa14.01□□□□□ -0.17
RAB11FIP3-201ENST00000262305 COL6A5A8TX70 2615 aa14.01□□□□□ -0.17
RAB11FIP3-201ENST00000262305 IGLV7-43P04211 117 aa14□□□□□ -0.17
RAB11FIP3-201ENST00000262305 OBSCN-AS1Q96MR7 158 aa14□□□□□ -0.17
RAB11FIP3-201ENST00000262305 SPRR4Q96PI1 79 aa14□□□□□ -0.17
RAB11FIP3-201ENST00000262305 IGLV5-48A0A075B6I7 105 aa13.99□□□□□ -0.17
RAB11FIP3-201ENST00000262305 A0A1B0GVX0 72 aa13.99□□□□□ -0.17
RAB11FIP3-201ENST00000262305 PRO0628Q9UI54 55 aa13.96□□□□□ -0.17
RAB11FIP3-201ENST00000262305 C4orf26Q17RF5 130 aa13.96□□□□□ -0.17
RAB11FIP3-201ENST00000262305 ANAPC11Q9NYG5 84 aa13.96□□□□□ -0.18
RAB11FIP3-201ENST00000262305 LINC00304Q8N9R0 145 aa13.94□□□□□ -0.18
RAB11FIP3-201ENST00000262305 CDH23Q9H251 3354 aa13.93□□□□□ -0.18
RAB11FIP3-201ENST00000262305 DSCR10P59022 87 aa13.92□□□□□ -0.18
RAB11FIP3-201ENST00000262305 NOTCH1P46531 2555 aa13.9□□□□□ -0.18
RAB11FIP3-201ENST00000262305 SETXQ7Z333 2677 aaKnown RBP13.9□□□□□ -0.18
RAB11FIP3-201ENST00000262305 ATP11AUNQ6ZP68 121 aa13.9□□□□□ -0.18
RAB11FIP3-201ENST00000262305 GCN1Q92616 2671 aaKnown RBP13.89□□□□□ -0.19
RAB11FIP3-201ENST00000262305 LINC00336Q6ZUF6 198 aa13.89□□□□□ -0.19
RAB11FIP3-201ENST00000262305 SMR3BP02814 79 aaPredicted RBP13.85□□□□□ -0.19
RAB11FIP3-201ENST00000262305 COA5Q86WW8 74 aa13.84□□□□□ -0.19
RAB11FIP3-201ENST00000262305 H7BZZ5 65 aa13.84□□□□□ -0.19
RAB11FIP3-201ENST00000262305 FRYQ5TBA9 3013 aa13.81□□□□□ -0.2
RAB11FIP3-201ENST00000262305 TNP2Q05952 138 aa13.8□□□□□ -0.2
RAB11FIP3-201ENST00000262305 UBR5O95071 2799 aaPredicted RBP13.79□□□□□ -0.2
RAB11FIP3-201ENST00000262305 Q8NDZ9 215 aa13.76□□□□□ -0.21
RAB11FIP3-201ENST00000262305 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.76□□□□□ -0.21
RAB11FIP3-201ENST00000262305 A8MUN3 132 aa13.72□□□□□ -0.21
RAB11FIP3-201ENST00000262305 NBEAL1Q6ZS30 2694 aa13.71□□□□□ -0.21
RAB11FIP3-201ENST00000262305 FLNCQ14315 2725 aa13.7□□□□□ -0.22
RAB11FIP3-201ENST00000262305 SPRR1AP35321 89 aa13.7□□□□□ -0.22
RAB11FIP3-201ENST00000262305 CYP4F30PQ9H0H9 118 aa13.69□□□□□ -0.22
RAB11FIP3-201ENST00000262305 IGLV8-61A0A075B6I0 122 aa13.68□□□□□ -0.22
RAB11FIP3-201ENST00000262305 J3QL48 77 aa13.68□□□□□ -0.22
RAB11FIP3-201ENST00000262305 C9orf92A6NGG3 77 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms