RNA–Protein interactions for RNA: ENST00000261866.11

SPG11-201, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPG11, Length 7,774 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-201ENST00000261866 TRAV22A0A0B4J277 110 aa8.03□□□□□ -1.12
SPG11-201ENST00000261866 GIG44P09565 113 aaPredicted RBP8.03□□□□□ -1.12
SPG11-201ENST00000261866 ZNF575Q86XF7 245 aa8.03□□□□□ -1.12
SPG11-201ENST00000261866 IGLV5-37A0A075B6J1 123 aa8.02□□□□□ -1.13
SPG11-201ENST00000261866 LINC00304Q8N9R0 145 aa8.02□□□□□ -1.13
SPG11-201ENST00000261866 TRBV7-4A0A0J9YYF1 115 aa8.01□□□□□ -1.13
SPG11-201ENST00000261866 KRTAP1-3Q8IUG1 177 aa8.01□□□□□ -1.13
SPG11-201ENST00000261866 EIF4EBP3O60516 100 aaPredicted RBP8□□□□□ -1.13
SPG11-201ENST00000261866 CRIPTQ9P021 101 aa7.99□□□□□ -1.13
SPG11-201ENST00000261866 LITAFQ99732 161 aa7.99□□□□□ -1.13
SPG11-201ENST00000261866 IGFL1Q6UW32 110 aa7.97□□□□□ -1.13
SPG11-201ENST00000261866 M0R2T5 61 aa7.96□□□□□ -1.13
SPG11-201ENST00000261866 COA5Q86WW8 74 aa7.96□□□□□ -1.13
SPG11-201ENST00000261866 Q8N1X5 172 aa7.96□□□□□ -1.13
SPG11-201ENST00000261866 A8MUN3 132 aa7.96□□□□□ -1.14
SPG11-201ENST00000261866 LOC110117498A0A087WWA1 95 aa7.96□□□□□ -1.14
SPG11-201ENST00000261866 KRTAP1-1Q07627 177 aa7.95□□□□□ -1.14
SPG11-201ENST00000261866 A8MWP4 228 aa7.94□□□□□ -1.14
SPG11-201ENST00000261866 BPTFQ12830 3046 aa7.94□□□□□ -1.14
SPG11-201ENST00000261866 ZNF861PO60384 105 aa7.94□□□□□ -1.14
SPG11-201ENST00000261866 MRPL34Q9BQ48 92 aaKnown RBP7.94□□□□□ -1.14
SPG11-201ENST00000261866 HECTD1Q9ULT8 2610 aa7.93□□□□□ -1.14
SPG11-201ENST00000261866 LINC00528Q8N1L1 170 aa7.93□□□□□ -1.14
SPG11-201ENST00000261866 PSORS1C2Q9UIG4 136 aa7.93□□□□□ -1.14
SPG11-201ENST00000261866 PRO0461Q9UI25 63 aa7.92□□□□□ -1.14
SPG11-201ENST00000261866 KCNQ1DNQ9H478 68 aa7.91□□□□□ -1.14
SPG11-201ENST00000261866 PRO0628Q9UI54 55 aa7.9□□□□□ -1.14
SPG11-201ENST00000261866 IGLV5-48A0A075B6I7 105 aa7.9□□□□□ -1.14
SPG11-201ENST00000261866 PRRC2CQ9Y520 2896 aaKnown RBP7.9□□□□□ -1.15
SPG11-201ENST00000261866 TNP2Q05952 138 aa7.9□□□□□ -1.15
SPG11-201ENST00000261866 IGLV7-43P04211 117 aa7.89□□□□□ -1.15
SPG11-201ENST00000261866 EPG5Q9HCE0 2579 aa7.89□□□□□ -1.15
SPG11-201ENST00000261866 MIR22HGQ0VDD5 57 aa7.89□□□□□ -1.15
SPG11-201ENST00000261866 PRR34Q9NV39 138 aa7.89□□□□□ -1.15
SPG11-201ENST00000261866 ERC2-IT1O76042 136 aa7.89□□□□□ -1.15
SPG11-201ENST00000261866 RBM12B-AS1Q9P1G2 102 aa7.88□□□□□ -1.15
SPG11-201ENST00000261866 KLK9Q2XQG4 91 aa7.88□□□□□ -1.15
SPG11-201ENST00000261866 Q8N377 158 aa7.88□□□□□ -1.15
SPG11-201ENST00000261866 BRCA2P51587 3418 aa7.87□□□□□ -1.15
SPG11-201ENST00000261866 C9orf163Q8N9P6 203 aa7.87□□□□□ -1.15
SPG11-201ENST00000261866 MKI67P46013 3256 aaKnown RBP7.87□□□□□ -1.15
SPG11-201ENST00000261866 C8orf17Q9NRJ1 99 aa7.86□□□□□ -1.15
SPG11-201ENST00000261866 UQCR11O14957 56 aa7.85□□□□□ -1.15
SPG11-201ENST00000261866 LOC101927531A0A1B0GV80 90 aa7.84□□□□□ -1.15
SPG11-201ENST00000261866 A0A1B0GVX0 72 aa7.82□□□□□ -1.16
SPG11-201ENST00000261866 LINC00336Q6ZUF6 198 aa7.82□□□□□ -1.16
SPG11-201ENST00000261866 LAMA3Q16787 3333 aa7.81□□□□□ -1.16
SPG11-201ENST00000261866 PRR15Q8IV56 129 aa7.81□□□□□ -1.16
SPG11-201ENST00000261866 FLNBO75369 2602 aaKnown RBP7.81□□□□□ -1.16
SPG11-201ENST00000261866 A0A1B0GW54 56 aa7.8□□□□□ -1.16
SPG11-201ENST00000261866 CHD7Q9P2D1 2997 aa7.8□□□□□ -1.16
SPG11-201ENST00000261866 LINC00612Q8N6U2 182 aa7.8□□□□□ -1.16
SPG11-201ENST00000261866 CR1P17927 2039 aa7.79□□□□□ -1.16
SPG11-201ENST00000261866 WIPF1O43516 503 aa7.79□□□□□ -1.16
SPG11-201ENST00000261866 SPRR4Q96PI1 79 aa7.78□□□□□ -1.16
SPG11-201ENST00000261866 PRR26Q8N8Z3 221 aa7.78□□□□□ -1.16
SPG11-201ENST00000261866 H3BPC8 53 aa7.77□□□□□ -1.17
SPG11-201ENST00000261866 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.77□□□□□ -1.17
SPG11-201ENST00000261866 USP24Q9UPU5 2620 aa7.76□□□□□ -1.17
SPG11-201ENST00000261866 CAMK2N1Q7Z7J9 78 aa7.76□□□□□ -1.17
SPG11-201ENST00000261866 PLA2G2DQ9UNK4 145 aa7.75□□□□□ -1.17
SPG11-201ENST00000261866 TLX1NBP0CAT3 122 aa7.75□□□□□ -1.17
SPG11-201ENST00000261866 Q6ZSA8 131 aa7.75□□□□□ -1.17
SPG11-201ENST00000261866 MGAM2Q2M2H8 2515 aa7.74□□□□□ -1.17
SPG11-201ENST00000261866 RANBP2P49792 3224 aaKnown RBP7.73□□□□□ -1.17
SPG11-201ENST00000261866 CDC42SE1Q9NRR8 79 aa7.73□□□□□ -1.17
SPG11-201ENST00000261866 CNBPP62633 177 aaKnown RBP7.72□□□□□ -1.17
SPG11-201ENST00000261866 XIRP2A4UGR9 3374 aa7.72□□□□□ -1.17
SPG11-201ENST00000261866 LUZP6Q538Z0 58 aa7.7□□□□□ -1.18
SPG11-201ENST00000261866 A0A1W2PNM2 257 aa7.69□□□□□ -1.18
SPG11-201ENST00000261866 IGLV7-46A0A075B6I9 117 aa7.68□□□□□ -1.18
SPG11-201ENST00000261866 FAM104AQ969W3 186 aa7.68□□□□□ -1.18
SPG11-201ENST00000261866 HTTP42858 3142 aa7.67□□□□□ -1.18
SPG11-201ENST00000261866 CFAP54Q96N23 3096 aa7.65□□□□□ -1.19
SPG11-201ENST00000261866 PRUNE2Q8WUY3 3088 aa7.65□□□□□ -1.19
SPG11-201ENST00000261866 FLNAP21333 2647 aaKnown RBP7.62□□□□□ -1.19
SPG11-201ENST00000261866 UNC80Q8N2C7 3258 aa7.62□□□□□ -1.19
SPG11-201ENST00000261866 CDH23Q9H251 3354 aa7.61□□□□□ -1.19
SPG11-201ENST00000261866 ITPR3Q14573 2671 aa7.61□□□□□ -1.19
SPG11-201ENST00000261866 CD164Q04900 197 aa7.61□□□□□ -1.19
SPG11-201ENST00000261866 CYP4F30PQ9H0H9 118 aa7.59□□□□□ -1.19
SPG11-201ENST00000261866 RPS28P62857 69 aaKnown RBP7.58□□□□□ -1.2
SPG11-201ENST00000261866 LINC00483Q53H64 154 aa7.56□□□□□ -1.2
SPG11-201ENST00000261866 LAMA2P24043 3122 aaKnown RBP7.55□□□□□ -1.2
SPG11-201ENST00000261866 CHD9Q3L8U1 2897 aa7.54□□□□□ -1.2
SPG11-201ENST00000261866 Q5VSD8 79 aa7.54□□□□□ -1.2
SPG11-201ENST00000261866 HELZ2Q9BYK8 2649 aaKnown RBP7.54□□□□□ -1.2
SPG11-201ENST00000261866 ATRQ13535 2644 aa7.52□□□□□ -1.2
SPG11-201ENST00000261866 MGAQ8IWI9 3026 aa7.52□□□□□ -1.21
SPG11-201ENST00000261866 FLG2Q5D862 2391 aaPredicted RBP7.52□□□□□ -1.21
SPG11-201ENST00000261866 KRTAP1-5Q9BYS1 174 aa7.52□□□□□ -1.21
SPG11-201ENST00000261866 CFAP46Q8IYW2 2715 aa7.52□□□□□ -1.21
SPG11-201ENST00000261866 KTN1-AS1Q86SY8 53 aa7.51□□□□□ -1.21
SPG11-201ENST00000261866 Q8NDZ9 215 aa7.51□□□□□ -1.21
SPG11-201ENST00000261866 CELSR3Q9NYQ7 3312 aa7.51□□□□□ -1.21
SPG11-201ENST00000261866 S4R3F8 94 aa7.51□□□□□ -1.21
SPG11-201ENST00000261866 KRTAP10-2P60368 255 aa7.5□□□□□ -1.21
SPG11-201ENST00000261866 TRIOO75962 3097 aa7.5□□□□□ -1.21
SPG11-201ENST00000261866 FREM2Q5SZK8 3169 aa7.49□□□□□ -1.21
SPG11-201ENST00000261866 H7BZZ5 65 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms