RNA–Protein interactions for RNA: ENST00000261813.8

PFDN1-201, Transcript of prefoldin subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-201ENST00000261813 SOSTDC1Q6X4U4 206 aa7.33□□□□□ -1.24
PFDN1-201ENST00000261813 RAB37Q96AX2 223 aa7.33□□□□□ -1.24
PFDN1-201ENST00000261813 XAGE1AQ9HD64 81 aa7.33□□□□□ -1.24
PFDN1-201ENST00000261813 TRBV10-2A0A0K0K1G8 114 aa7.32□□□□□ -1.24
PFDN1-201ENST00000261813 SNHG12Q9BXW3 62 aa7.32□□□□□ -1.24
PFDN1-201ENST00000261813 NHP2Q9NX24 153 aaKnown RBP7.32□□□□□ -1.24
PFDN1-201ENST00000261813 A0A087WYN8 130 aa7.31□□□□□ -1.24
PFDN1-201ENST00000261813 A0A1B0GWB2 263 aa7.31□□□□□ -1.24
PFDN1-201ENST00000261813 COL5A1-AS1Q5SY13 56 aa7.31□□□□□ -1.24
PFDN1-201ENST00000261813 PRO1854Q9UHT4 67 aa7.31□□□□□ -1.24
PFDN1-201ENST00000261813 CFC1BP0CG36 223 aa7.3□□□□□ -1.24
PFDN1-201ENST00000261813 CFC1P0CG37 223 aa7.3□□□□□ -1.24
PFDN1-201ENST00000261813 C9orf129Q5T035 196 aaKnown RBP7.3□□□□□ -1.24
PFDN1-201ENST00000261813 DPH3Q96FX2 82 aa7.3□□□□□ -1.24
PFDN1-201ENST00000261813 PLAC8Q9NZF1 115 aa7.3□□□□□ -1.24
PFDN1-201ENST00000261813 INAFM2P0DMQ5 153 aa7.29□□□□□ -1.24
PFDN1-201ENST00000261813 NKAPP1Q8N9T2 125 aa7.29□□□□□ -1.24
PFDN1-201ENST00000261813 TMEM126AQ9H061 195 aa7.29□□□□□ -1.24
PFDN1-201ENST00000261813 IGLV5-37A0A075B6J1 123 aa7.28□□□□□ -1.24
PFDN1-201ENST00000261813 M0R378 163 aa7.28□□□□□ -1.24
PFDN1-201ENST00000261813 VPREB1P12018 145 aa7.28□□□□□ -1.24
PFDN1-201ENST00000261813 DMBT1Q9UGM3 2413 aaPredicted RBP7.28□□□□□ -1.24
PFDN1-201ENST00000261813 A0A1W2PNN7 141 aa7.27□□□□□ -1.25
PFDN1-201ENST00000261813 S100A7L2Q5SY68 101 aa7.27□□□□□ -1.25
PFDN1-201ENST00000261813 Q5VSD8 79 aa7.26□□□□□ -1.25
PFDN1-201ENST00000261813 OR13C6PQ8NH95 151 aa7.26□□□□□ -1.25
PFDN1-201ENST00000261813 IGKV2-28A0A075B6P5 120 aa7.25□□□□□ -1.25
PFDN1-201ENST00000261813 A0A1B0GV72 72 aa7.25□□□□□ -1.25
PFDN1-201ENST00000261813 IGKV2D-28P01615 120 aa7.25□□□□□ -1.25
PFDN1-201ENST00000261813 FAM168BA1KXE4 195 aa7.24□□□□□ -1.25
PFDN1-201ENST00000261813 NCR3O14931 201 aa7.24□□□□□ -1.25
PFDN1-201ENST00000261813 SCGB1A1P11684 91 aa7.24□□□□□ -1.25
PFDN1-201ENST00000261813 RPL13AP40429 203 aaKnown RBP7.24□□□□□ -1.25
PFDN1-201ENST00000261813 Q1RN00 199 aa7.24□□□□□ -1.25
PFDN1-201ENST00000261813 KRTAP7-1Q8IUC3 87 aa7.24□□□□□ -1.25
PFDN1-201ENST00000261813 COX6CP09669 75 aa7.23□□□□□ -1.25
PFDN1-201ENST00000261813 MRPL55Q7Z7F7 128 aaKnown RBP7.23□□□□□ -1.25
PFDN1-201ENST00000261813 LINC00337Q8N6G1 96 aa7.23□□□□□ -1.25
PFDN1-201ENST00000261813 C22orf24Q9Y442 160 aa7.23□□□□□ -1.25
PFDN1-201ENST00000261813 VPS13BQ7Z7G8 4022 aa7.23□□□□□ -1.25
PFDN1-201ENST00000261813 K7ERJ3 54 aa7.22□□□□□ -1.25
PFDN1-201ENST00000261813 IGLV6-57P01721 117 aa7.22□□□□□ -1.25
PFDN1-201ENST00000261813 KRTAP10-4P60372 401 aaPredicted RBP7.22□□□□□ -1.25
PFDN1-201ENST00000261813 PRR3P79522 188 aaKnown RBP7.22□□□□□ -1.25
PFDN1-201ENST00000261813 SERTAD4-AS1Q5TG53 156 aa7.22□□□□□ -1.25
PFDN1-201ENST00000261813 LYRM7Q5U5X0 104 aa7.22□□□□□ -1.25
PFDN1-201ENST00000261813 FAM19A5Q7Z5A7 132 aaPredicted RBP7.22□□□□□ -1.25
PFDN1-201ENST00000261813 M0QXV9 152 aa7.21□□□□□ -1.25
PFDN1-201ENST00000261813 Q8NDZ9 215 aa7.21□□□□□ -1.25
PFDN1-201ENST00000261813 H7C2G1 150 aa7.2□□□□□ -1.26
PFDN1-201ENST00000261813 TAX1BP3O14907 124 aa7.2□□□□□ -1.26
PFDN1-201ENST00000261813 RPL28P46779 137 aaKnown RBP7.2□□□□□ -1.26
PFDN1-201ENST00000261813 PSMB2P49721 201 aa7.2□□□□□ -1.26
PFDN1-201ENST00000261813 VAMP3Q15836 100 aa7.2□□□□□ -1.26
PFDN1-201ENST00000261813 PHF5AQ7RTV0 110 aaKnown RBP7.2□□□□□ -1.26
PFDN1-201ENST00000261813 C7orf33Q8WU49 177 aa7.2□□□□□ -1.26
PFDN1-201ENST00000261813 TRBV10-3A0A0K0K1G6 114 aa7.2□□□□□ -1.26
PFDN1-201ENST00000261813 TSPAN13O95857 204 aa7.2□□□□□ -1.26
PFDN1-201ENST00000261813 RPL37AP61513 92 aaKnown RBP7.2□□□□□ -1.26
PFDN1-201ENST00000261813 LINC00167Q96N53 147 aa7.2□□□□□ -1.26
PFDN1-201ENST00000261813 VPS25Q9BRG1 176 aa7.2□□□□□ -1.26
PFDN1-201ENST00000261813 IGLV1-50A0A075B6I6 118 aa7.19□□□□□ -1.26
PFDN1-201ENST00000261813 TRAV23DV6A0A075B6W5 121 aa7.19□□□□□ -1.26
PFDN1-201ENST00000261813 SMIM11BQ8TCY0 68 aa7.19□□□□□ -1.26
PFDN1-201ENST00000261813 KCNQ1DNQ9H478 68 aa7.19□□□□□ -1.26
PFDN1-201ENST00000261813 TRBV7-6A0A0J9YX20 115 aa7.18□□□□□ -1.26
PFDN1-201ENST00000261813 H0YGX0 51 aa7.18□□□□□ -1.26
PFDN1-201ENST00000261813 PRYO14603 147 aa7.18□□□□□ -1.26
PFDN1-201ENST00000261813 SNCGO76070 127 aa7.18□□□□□ -1.26
PFDN1-201ENST00000261813 SCGB1C2P0DMR2 95 aa7.18□□□□□ -1.26
PFDN1-201ENST00000261813 GAGE10A6NGK3 116 aa7.17□□□□□ -1.26
PFDN1-201ENST00000261813 H3BUT2 72 aa7.17□□□□□ -1.26
PFDN1-201ENST00000261813 FABP2P12104 132 aa7.17□□□□□ -1.26
PFDN1-201ENST00000261813 UBE2BP63146 152 aa7.17□□□□□ -1.26
PFDN1-201ENST00000261813 DIRC1Q969H9 104 aa7.17□□□□□ -1.26
PFDN1-201ENST00000261813 ZNF73O43830 326 aaPredicted RBP7.16□□□□□ -1.26
PFDN1-201ENST00000261813 KRTAP11-1Q8IUC1 163 aa7.16□□□□□ -1.26
PFDN1-201ENST00000261813 MYCBP2O75592 4640 aa7.15□□□□□ -1.26
PFDN1-201ENST00000261813 PKHD1L1Q86WI1 4243 aa7.15□□□□□ -1.26
PFDN1-201ENST00000261813 TRBV20-1A0A075B6N2 111 aa7.15□□□□□ -1.26
PFDN1-201ENST00000261813 A0A1W2PPM0 123 aa7.15□□□□□ -1.26
PFDN1-201ENST00000261813 KRTAP23-1A1A580 65 aa7.15□□□□□ -1.26
PFDN1-201ENST00000261813 RPL37AP8A6NKH3 93 aa7.15□□□□□ -1.26
PFDN1-201ENST00000261813 SRRM2Q9UQ35 2752 aaKnown RBP7.14□□□□□ -1.27
PFDN1-201ENST00000261813 TRIAP1O43715 76 aa7.14□□□□□ -1.27
PFDN1-201ENST00000261813 C6orf99Q4VX62 202 aa7.14□□□□□ -1.27
PFDN1-201ENST00000261813 REG3GQ6UW15 175 aa7.14□□□□□ -1.27
PFDN1-201ENST00000261813 SPRR1AP35321 89 aa7.13□□□□□ -1.27
PFDN1-201ENST00000261813 PSORS1C2Q9UIG4 136 aa7.13□□□□□ -1.27
PFDN1-201ENST00000261813 FAT3Q8TDW7 4589 aa7.12□□□□□ -1.27
PFDN1-201ENST00000261813 ETDCA0A1B0GVM5 59 aa7.12□□□□□ -1.27
PFDN1-201ENST00000261813 A0A1B0GX51 115 aa7.12□□□□□ -1.27
PFDN1-201ENST00000261813 SLC25A20O43772 301 aa7.12□□□□□ -1.27
PFDN1-201ENST00000261813 COX7BP24311 80 aa7.12□□□□□ -1.27
PFDN1-201ENST00000261813 GTF2H5Q6ZYL4 71 aa7.12□□□□□ -1.27
PFDN1-201ENST00000261813 ELOF1P60002 83 aaKnown RBP7.1□□□□□ -1.27
PFDN1-201ENST00000261813 ATXN8Q156A1 80 aa7.1□□□□□ -1.27
PFDN1-201ENST00000261813 C5orf47Q569G3 176 aa7.1□□□□□ -1.27
PFDN1-201ENST00000261813 NAA38Q9BRA0 125 aaKnown RBP7.1□□□□□ -1.27
PFDN1-201ENST00000261813 SPCS1Q9Y6A9 102 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 127.8 ms