RNA–Protein interactions for RNA: ENST00000261799.8

PDGFRB-201, Transcript of platelet derived growth factor receptor beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRB, Length 5,717 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-201ENST00000261799 M0R2T5 61 aa8.81□□□□□ -1
PDGFRB-201ENST00000261799 ANAPC11Q9NYG5 84 aa8.8□□□□□ -1
PDGFRB-201ENST00000261799 IGLV7-46A0A075B6I9 117 aa8.8□□□□□ -1
PDGFRB-201ENST00000261799 ANKRD11Q6UB99 2663 aaPredicted RBP8.78□□□□□ -1
PDGFRB-201ENST00000261799 TLN2Q9Y4G6 2542 aa8.78□□□□□ -1
PDGFRB-201ENST00000261799 PMAIP1Q13794 54 aa8.78□□□□□ -1
PDGFRB-201ENST00000261799 CEP295Q9C0D2 2601 aa8.75□□□□□ -1.01
PDGFRB-201ENST00000261799 K7EQZ3 153 aa8.75□□□□□ -1.01
PDGFRB-201ENST00000261799 LCE6AA0A183 80 aa8.74□□□□□ -1.01
PDGFRB-201ENST00000261799 LITAFQ99732 161 aa8.73□□□□□ -1.01
PDGFRB-201ENST00000261799 IGLV8-61A0A075B6I0 122 aa8.72□□□□□ -1.01
PDGFRB-201ENST00000261799 WIPF1O43516 503 aa8.72□□□□□ -1.01
PDGFRB-201ENST00000261799 C1orf195Q5TG92 126 aa8.72□□□□□ -1.01
PDGFRB-201ENST00000261799 PRR15Q8IV56 129 aa8.71□□□□□ -1.01
PDGFRB-201ENST00000261799 USP9YO00507 2555 aaPredicted RBP8.69□□□□□ -1.02
PDGFRB-201ENST00000261799 CD164Q04900 197 aa8.69□□□□□ -1.02
PDGFRB-201ENST00000261799 Q8N377 158 aa8.69□□□□□ -1.02
PDGFRB-201ENST00000261799 PRR26Q8N8Z3 221 aa8.69□□□□□ -1.02
PDGFRB-201ENST00000261799 SPTBN4Q9H254 2564 aa8.68□□□□□ -1.02
PDGFRB-201ENST00000261799 ANKRD17O75179 2603 aaKnown RBP8.68□□□□□ -1.02
PDGFRB-201ENST00000261799 MTORP42345 2549 aa8.68□□□□□ -1.02
PDGFRB-201ENST00000261799 Q5VSD8 79 aa8.67□□□□□ -1.02
PDGFRB-201ENST00000261799 FAM229BQ4G0N7 80 aa8.65□□□□□ -1.02
PDGFRB-201ENST00000261799 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.63□□□□□ -1.03
PDGFRB-201ENST00000261799 LINC01600Q96MT4 127 aa8.62□□□□□ -1.03
PDGFRB-201ENST00000261799 LINC01554Q52M75 96 aa8.61□□□□□ -1.03
PDGFRB-201ENST00000261799 PLAC8Q9NZF1 115 aa8.61□□□□□ -1.03
PDGFRB-201ENST00000261799 A0A0G2JQZ4 141 aa8.6□□□□□ -1.03
PDGFRB-201ENST00000261799 F8P00451 2351 aa8.59□□□□□ -1.03
PDGFRB-201ENST00000261799 COA5Q86WW8 74 aa8.59□□□□□ -1.03
PDGFRB-201ENST00000261799 ERC2-IT1O76042 136 aa8.59□□□□□ -1.03
PDGFRB-201ENST00000261799 SETD2Q9BYW2 2564 aaPredicted RBP8.59□□□□□ -1.03
PDGFRB-201ENST00000261799 SMCPP49901 116 aaPredicted RBP8.58□□□□□ -1.04
PDGFRB-201ENST00000261799 PKD1L2Q7Z442 2459 aa8.58□□□□□ -1.04
PDGFRB-201ENST00000261799 POLQO75417 2590 aa8.58□□□□□ -1.04
PDGFRB-201ENST00000261799 SEC61BP60468 96 aaKnown RBP8.57□□□□□ -1.04
PDGFRB-201ENST00000261799 IGLV5-48A0A075B6I7 105 aa8.56□□□□□ -1.04
PDGFRB-201ENST00000261799 CRIPTQ9P021 101 aa8.55□□□□□ -1.04
PDGFRB-201ENST00000261799 UQCR11O14957 56 aa8.53□□□□□ -1.04
PDGFRB-201ENST00000261799 EPG5Q9HCE0 2579 aa8.53□□□□□ -1.04
PDGFRB-201ENST00000261799 MUC4Q99102 2169 aa8.52□□□□□ -1.05
PDGFRB-201ENST00000261799 Q8N1X5 172 aa8.52□□□□□ -1.05
PDGFRB-201ENST00000261799 OXTP01178 125 aa8.51□□□□□ -1.05
PDGFRB-201ENST00000261799 SPINT4Q6UDR6 99 aa8.51□□□□□ -1.05
PDGFRB-201ENST00000261799 PRO0461Q9UI25 63 aa8.51□□□□□ -1.05
PDGFRB-201ENST00000261799 FLNBO75369 2602 aaKnown RBP8.46□□□□□ -1.05
PDGFRB-201ENST00000261799 FAM104AQ969W3 186 aa8.46□□□□□ -1.06
PDGFRB-201ENST00000261799 HRES1P13985 223 aa8.46□□□□□ -1.06
PDGFRB-201ENST00000261799 MIR22HGQ0VDD5 57 aa8.45□□□□□ -1.06
PDGFRB-201ENST00000261799 ACANP16112 2415 aa8.45□□□□□ -1.06
PDGFRB-201ENST00000261799 SRCAPQ6ZRS2 3230 aa8.44□□□□□ -1.06
PDGFRB-201ENST00000261799 A0A0D9SG42 100 aa8.44□□□□□ -1.06
PDGFRB-201ENST00000261799 A0A1W2PNM2 257 aa8.44□□□□□ -1.06
PDGFRB-201ENST00000261799 EIF4EBP3O60516 100 aaPredicted RBP8.43□□□□□ -1.06
PDGFRB-201ENST00000261799 CAMK2N1Q7Z7J9 78 aa8.42□□□□□ -1.06
PDGFRB-201ENST00000261799 S4R3F8 94 aa8.41□□□□□ -1.06
PDGFRB-201ENST00000261799 KRTAP10-1P60331 282 aa8.41□□□□□ -1.06
PDGFRB-201ENST00000261799 KRTAP21-3Q3LHN1 58 aa8.4□□□□□ -1.06
PDGFRB-201ENST00000261799 CYP4F30PQ9H0H9 118 aa8.4□□□□□ -1.07
PDGFRB-201ENST00000261799 A8MUN3 132 aa8.39□□□□□ -1.07
PDGFRB-201ENST00000261799 CSAG1Q6PB30 78 aa8.39□□□□□ -1.07
PDGFRB-201ENST00000261799 ZCCHC13Q8WW36 166 aaKnown RBP8.38□□□□□ -1.07
PDGFRB-201ENST00000261799 CR1P17927 2039 aa8.36□□□□□ -1.07
PDGFRB-201ENST00000261799 KRTAP10-2P60368 255 aa8.36□□□□□ -1.07
PDGFRB-201ENST00000261799 CDC42SE1Q9NRR8 79 aa8.35□□□□□ -1.07
PDGFRB-201ENST00000261799 FP248Q71RG6 208 aaPredicted RBP8.33□□□□□ -1.08
PDGFRB-201ENST00000261799 RPS28P62857 69 aaKnown RBP8.3□□□□□ -1.08
PDGFRB-201ENST00000261799 LINC00483Q53H64 154 aa8.29□□□□□ -1.08
PDGFRB-201ENST00000261799 KRTAP1-5Q9BYS1 174 aa8.29□□□□□ -1.08
PDGFRB-201ENST00000261799 SPANXA2-OT1Q8N9U9 137 aa8.29□□□□□ -1.08
PDGFRB-201ENST00000261799 HECTD1Q9ULT8 2610 aa8.28□□□□□ -1.08
PDGFRB-201ENST00000261799 PRO0628Q9UI54 55 aa8.28□□□□□ -1.08
PDGFRB-201ENST00000261799 C4orf26Q17RF5 130 aa8.27□□□□□ -1.09
PDGFRB-201ENST00000261799 WDR87Q6ZQQ6 2873 aa8.26□□□□□ -1.09
PDGFRB-201ENST00000261799 Q6ZR54 194 aa8.23□□□□□ -1.09
PDGFRB-201ENST00000261799 MGAM2Q2M2H8 2515 aa8.23□□□□□ -1.09
PDGFRB-201ENST00000261799 KLKP1Q107X0 134 aa8.22□□□□□ -1.09
PDGFRB-201ENST00000261799 SPRR1AP35321 89 aa8.22□□□□□ -1.09
PDGFRB-201ENST00000261799 SPRR1BP22528 89 aa8.2□□□□□ -1.1
PDGFRB-201ENST00000261799 SPINK7P58062 85 aa8.19□□□□□ -1.1
PDGFRB-201ENST00000261799 A0A1B0GU33 70 aa8.17□□□□□ -1.1
PDGFRB-201ENST00000261799 R4GN34 69 aa8.17□□□□□ -1.1
PDGFRB-201ENST00000261799 MMP24-AS1A0A0U1RRL7 71 aa8.14□□□□□ -1.11
PDGFRB-201ENST00000261799 PLAC4Q8WY50 150 aa8.13□□□□□ -1.11
PDGFRB-201ENST00000261799 KRTAP26-1Q6PEX3 210 aa8.11□□□□□ -1.11
PDGFRB-201ENST00000261799 DMAC1Q96GE9 116 aa8.1□□□□□ -1.11
PDGFRB-201ENST00000261799 USP24Q9UPU5 2620 aa8.1□□□□□ -1.11
PDGFRB-201ENST00000261799 Q5W150 140 aa8.1□□□□□ -1.11
PDGFRB-201ENST00000261799 LCA10Q71F78 164 aa8.07□□□□□ -1.12
PDGFRB-201ENST00000261799 LUZP6Q538Z0 58 aa8.06□□□□□ -1.12
PDGFRB-201ENST00000261799 HELZ2Q9BYK8 2649 aaKnown RBP8.06□□□□□ -1.12
PDGFRB-201ENST00000261799 H7BZZ5 65 aa8.06□□□□□ -1.12
PDGFRB-201ENST00000261799 MAST4O15021 2626 aa8.06□□□□□ -1.12
PDGFRB-201ENST00000261799 Q1T7F1 81 aa8.04□□□□□ -1.12
PDGFRB-201ENST00000261799 Q8N9P0 234 aaPredicted RBP8.04□□□□□ -1.12
PDGFRB-201ENST00000261799 GOLGB1Q14789 3259 aaKnown RBP8.04□□□□□ -1.12
PDGFRB-201ENST00000261799 OCR1Q9BZK8 76 aa8.03□□□□□ -1.12
PDGFRB-201ENST00000261799 LINC00472Q9H8W2 130 aa8.03□□□□□ -1.12
PDGFRB-201ENST00000261799 Q8NDZ9 215 aa8.02□□□□□ -1.13
PDGFRB-201ENST00000261799 M0QZ58 72 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms