RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 RYR1P21817 5038 aa9.9□□□□□ -0.83
CCDC90B-201ENST00000260054 CDK2AP2O75956 126 aa9.9□□□□□ -0.83
CCDC90B-201ENST00000260054 PSMB2P49721 201 aa9.9□□□□□ -0.83
CCDC90B-201ENST00000260054 MRPL55Q7Z7F7 128 aaKnown RBP9.9□□□□□ -0.83
CCDC90B-201ENST00000260054 IGKV2-28A0A075B6P5 120 aa9.89□□□□□ -0.83
CCDC90B-201ENST00000260054 A4D1N5 150 aa9.89□□□□□ -0.83
CCDC90B-201ENST00000260054 IGKV2D-28P01615 120 aa9.89□□□□□ -0.83
CCDC90B-201ENST00000260054 TEN1Q86WV5 123 aa9.89□□□□□ -0.83
CCDC90B-201ENST00000260054 C7orf33Q8WU49 177 aa9.89□□□□□ -0.83
CCDC90B-201ENST00000260054 M0R378 163 aa9.87□□□□□ -0.83
CCDC90B-201ENST00000260054 LINC00167Q96N53 147 aa9.87□□□□□ -0.83
CCDC90B-201ENST00000260054 CDIP1Q9H305 208 aa9.87□□□□□ -0.83
CCDC90B-201ENST00000260054 TRBV10-2A0A0K0K1G8 114 aa9.87□□□□□ -0.83
CCDC90B-201ENST00000260054 KRTAP11-1Q8IUC1 163 aa9.87□□□□□ -0.83
CCDC90B-201ENST00000260054 RPL37AP8A6NKH3 93 aa9.85□□□□□ -0.83
CCDC90B-201ENST00000260054 TCL1BO95988 128 aa9.85□□□□□ -0.83
CCDC90B-201ENST00000260054 CFC1BP0CG36 223 aa9.85□□□□□ -0.83
CCDC90B-201ENST00000260054 CFC1P0CG37 223 aa9.85□□□□□ -0.83
CCDC90B-201ENST00000260054 LINC00337Q8N6G1 96 aa9.85□□□□□ -0.83
CCDC90B-201ENST00000260054 PRO1854Q9UHT4 67 aa9.85□□□□□ -0.83
CCDC90B-201ENST00000260054 SMR3BP02814 79 aaPredicted RBP9.84□□□□□ -0.83
CCDC90B-201ENST00000260054 A0A0B4J2C4 111 aa9.83□□□□□ -0.84
CCDC90B-201ENST00000260054 TRBV10-3A0A0K0K1G6 114 aa9.83□□□□□ -0.84
CCDC90B-201ENST00000260054 UBE2BP63146 152 aa9.83□□□□□ -0.84
CCDC90B-201ENST00000260054 HSPG2P98160 4391 aa9.83□□□□□ -0.84
CCDC90B-201ENST00000260054 IGLV1-50A0A075B6I6 118 aa9.83□□□□□ -0.84
CCDC90B-201ENST00000260054 IGLV6-57P01721 117 aa9.82□□□□□ -0.84
CCDC90B-201ENST00000260054 S100A7L2Q5SY68 101 aa9.81□□□□□ -0.84
CCDC90B-201ENST00000260054 LINC01600Q96MT4 127 aa9.81□□□□□ -0.84
CCDC90B-201ENST00000260054 OR13C6PQ8NH95 151 aa9.8□□□□□ -0.84
CCDC90B-201ENST00000260054 SCGB1C2P0DMR2 95 aa9.8□□□□□ -0.84
CCDC90B-201ENST00000260054 LINC00528Q8N1L1 170 aa9.8□□□□□ -0.84
CCDC90B-201ENST00000260054 FAT1Q14517 4588 aa9.79□□□□□ -0.84
CCDC90B-201ENST00000260054 TRAV13-2A0A0B4J235 113 aa9.79□□□□□ -0.84
CCDC90B-201ENST00000260054 ANKRD29Q8N6D5 301 aa9.79□□□□□ -0.84
CCDC90B-201ENST00000260054 TMEM126AQ9H061 195 aa9.79□□□□□ -0.84
CCDC90B-201ENST00000260054 MT-ATP8P03928 68 aa9.78□□□□□ -0.84
CCDC90B-201ENST00000260054 PSORS1C2Q9UIG4 136 aa9.78□□□□□ -0.84
CCDC90B-201ENST00000260054 SLC25A20O43772 301 aa9.77□□□□□ -0.84
CCDC90B-201ENST00000260054 KCNQ1DNQ9H478 68 aa9.77□□□□□ -0.84
CCDC90B-201ENST00000260054 KRTAP17-1Q9BYP8 105 aa9.77□□□□□ -0.85
CCDC90B-201ENST00000260054 ATXN8Q156A1 80 aa9.76□□□□□ -0.85
CCDC90B-201ENST00000260054 TRAV23DV6A0A075B6W5 121 aa9.75□□□□□ -0.85
CCDC90B-201ENST00000260054 PRYO14603 147 aa9.75□□□□□ -0.85
CCDC90B-201ENST00000260054 RPL13AP40429 203 aaKnown RBP9.75□□□□□ -0.85
CCDC90B-201ENST00000260054 VPS13BQ7Z7G8 4022 aa9.75□□□□□ -0.85
CCDC90B-201ENST00000260054 REG3GQ6UW15 175 aa9.74□□□□□ -0.85
CCDC90B-201ENST00000260054 C9JAW5 83 aa9.74□□□□□ -0.85
CCDC90B-201ENST00000260054 RPL37AP61513 92 aaKnown RBP9.74□□□□□ -0.85
CCDC90B-201ENST00000260054 C1orf137Q5JT78 98 aa9.74□□□□□ -0.85
CCDC90B-201ENST00000260054 SPRR1AP35321 89 aa9.73□□□□□ -0.85
CCDC90B-201ENST00000260054 SMIM11BQ8TCY0 68 aa9.72□□□□□ -0.85
CCDC90B-201ENST00000260054 H7C2G1 150 aa9.71□□□□□ -0.85
CCDC90B-201ENST00000260054 ZNF73O43830 326 aaPredicted RBP9.71□□□□□ -0.85
CCDC90B-201ENST00000260054 KRTAP10-4P60372 401 aaPredicted RBP9.71□□□□□ -0.85
CCDC90B-201ENST00000260054 KRTAP4-16G5E9R7 235 aaPredicted RBP9.71□□□□□ -0.86
CCDC90B-201ENST00000260054 BCE1O60756 84 aa9.71□□□□□ -0.86
CCDC90B-201ENST00000260054 Q1RN00 199 aa9.71□□□□□ -0.86
CCDC90B-201ENST00000260054 Q5VSD8 79 aa9.71□□□□□ -0.86
CCDC90B-201ENST00000260054 FAM229AH3BQW9 127 aa9.7□□□□□ -0.86
CCDC90B-201ENST00000260054 Q6Q795 121 aa9.7□□□□□ -0.86
CCDC90B-201ENST00000260054 Q8N1X5 172 aa9.7□□□□□ -0.86
CCDC90B-201ENST00000260054 C6orf99Q4VX62 202 aa9.69□□□□□ -0.86
CCDC90B-201ENST00000260054 H3BT86 120 aa9.68□□□□□ -0.86
CCDC90B-201ENST00000260054 FAM19A1Q7Z5A9 133 aa9.68□□□□□ -0.86
CCDC90B-201ENST00000260054 DIRC1Q969H9 104 aa9.68□□□□□ -0.86
CCDC90B-201ENST00000260054 HERC2O95714 4834 aa9.68□□□□□ -0.86
CCDC90B-201ENST00000260054 IGLV7-43P04211 117 aa9.67□□□□□ -0.86
CCDC90B-201ENST00000260054 PRLHP81277 87 aa9.67□□□□□ -0.86
CCDC90B-201ENST00000260054 ANAPC13Q9BS18 74 aa9.67□□□□□ -0.86
CCDC90B-201ENST00000260054 ETDCA0A1B0GVM5 59 aa9.67□□□□□ -0.86
CCDC90B-201ENST00000260054 TRIAP1O43715 76 aa9.67□□□□□ -0.86
CCDC90B-201ENST00000260054 SNCGO76070 127 aa9.67□□□□□ -0.86
CCDC90B-201ENST00000260054 PLA2G1BP04054 148 aaKnown RBP9.67□□□□□ -0.86
CCDC90B-201ENST00000260054 COX6CP09669 75 aa9.67□□□□□ -0.86
CCDC90B-201ENST00000260054 RPL28P46779 137 aaKnown RBP9.67□□□□□ -0.86
CCDC90B-201ENST00000260054 B5MCH6 92 aa9.66□□□□□ -0.86
CCDC90B-201ENST00000260054 KRTAP13-1Q8IUC0 172 aa9.66□□□□□ -0.86
CCDC90B-201ENST00000260054 UBE2AP49459 152 aa9.65□□□□□ -0.86
CCDC90B-201ENST00000260054 SVIPQ8NHG7 77 aa9.65□□□□□ -0.86
CCDC90B-201ENST00000260054 SRRM2Q9UQ35 2752 aaKnown RBP9.64□□□□□ -0.87
CCDC90B-201ENST00000260054 Q6ZRX8 168 aa9.64□□□□□ -0.87
CCDC90B-201ENST00000260054 ZNF861PO60384 105 aa9.63□□□□□ -0.87
CCDC90B-201ENST00000260054 ELOF1P60002 83 aaKnown RBP9.63□□□□□ -0.87
CCDC90B-201ENST00000260054 TRBV7-6A0A0J9YX20 115 aa9.62□□□□□ -0.87
CCDC90B-201ENST00000260054 FAM240AA0A1B0GVK7 77 aa9.62□□□□□ -0.87
CCDC90B-201ENST00000260054 H0Y9J4 135 aa9.62□□□□□ -0.87
CCDC90B-201ENST00000260054 COX7BP24311 80 aa9.62□□□□□ -0.87
CCDC90B-201ENST00000260054 LST1O00453 97 aa9.61□□□□□ -0.87
CCDC90B-201ENST00000260054 Q9BRP9 147 aa9.61□□□□□ -0.87
CCDC90B-201ENST00000260054 NDUFV3P56181 108 aaKnown RBP9.6□□□□□ -0.87
CCDC90B-201ENST00000260054 SMCR5Q8TEV8 140 aa9.6□□□□□ -0.87
CCDC90B-201ENST00000260054 HIGD2AQ9BW72 106 aa9.6□□□□□ -0.87
CCDC90B-201ENST00000260054 TEX49A0A1B0GTD5 131 aa9.59□□□□□ -0.87
CCDC90B-201ENST00000260054 KRTAP4-5Q9BYR2 181 aa9.59□□□□□ -0.87
CCDC90B-201ENST00000260054 ERC2-IT1O76042 136 aa9.57□□□□□ -0.88
CCDC90B-201ENST00000260054 SPINK6Q6UWN8 80 aa9.57□□□□□ -0.88
CCDC90B-201ENST00000260054 LINC00575Q6W349 94 aa9.55□□□□□ -0.88
CCDC90B-201ENST00000260054 H0YGX0 51 aa9.55□□□□□ -0.88
CCDC90B-201ENST00000260054 ACYP1P07311 99 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms