RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 NDUFV3P56181 108 aaKnown RBP5.92□□□□□ -1.46
CKAP2-201ENST00000258607 DNAH7Q8WXX0 4024 aa5.92□□□□□ -1.46
CKAP2-201ENST00000258607 M0QXV9 152 aa5.92□□□□□ -1.46
CKAP2-201ENST00000258607 COX17Q14061 63 aa5.92□□□□□ -1.46
CKAP2-201ENST00000258607 ERC2-IT1O76042 136 aa5.91□□□□□ -1.46
CKAP2-201ENST00000258607 CCKP06307 115 aa5.91□□□□□ -1.46
CKAP2-201ENST00000258607 TMEM256-PLSCR3K7ERE1 68 aa5.9□□□□□ -1.46
CKAP2-201ENST00000258607 KRTAP26-1Q6PEX3 210 aa5.9□□□□□ -1.46
CKAP2-201ENST00000258607 ANAPC11Q9NYG5 84 aa5.9□□□□□ -1.46
CKAP2-201ENST00000258607 M0R378 163 aa5.9□□□□□ -1.47
CKAP2-201ENST00000258607 A0A1B0GX51 115 aa5.89□□□□□ -1.47
CKAP2-201ENST00000258607 UBL5Q9BZL1 73 aa5.88□□□□□ -1.47
CKAP2-201ENST00000258607 PANO1I0J062 215 aa5.87□□□□□ -1.47
CKAP2-201ENST00000258607 IGLV6-57P01721 117 aa5.87□□□□□ -1.47
CKAP2-201ENST00000258607 NDUFC2O95298 119 aa5.87□□□□□ -1.47
CKAP2-201ENST00000258607 MRPL55Q7Z7F7 128 aaKnown RBP5.87□□□□□ -1.47
CKAP2-201ENST00000258607 RMI2Q96E14 147 aa5.87□□□□□ -1.47
CKAP2-201ENST00000258607 IGLV9-49A0A0B4J1Y8 123 aa5.86□□□□□ -1.47
CKAP2-201ENST00000258607 PLECQ15149 4684 aaKnown RBP5.85□□□□□ -1.47
CKAP2-201ENST00000258607 UBE2AP49459 152 aa5.85□□□□□ -1.47
CKAP2-201ENST00000258607 FLG2Q5D862 2391 aaPredicted RBP5.85□□□□□ -1.47
CKAP2-201ENST00000258607 GVQW2A0A096LPI5 108 aaPredicted RBP5.85□□□□□ -1.47
CKAP2-201ENST00000258607 BPY2O14599 106 aa5.84□□□□□ -1.47
CKAP2-201ENST00000258607 NHLRC4P0CG21 123 aaPredicted RBP5.84□□□□□ -1.47
CKAP2-201ENST00000258607 C9orf153Q5TBE3 101 aa5.84□□□□□ -1.47
CKAP2-201ENST00000258607 LINC00643Q86TS7 51 aa5.84□□□□□ -1.47
CKAP2-201ENST00000258607 UPK3BQ9BT76 320 aa5.84□□□□□ -1.47
CKAP2-201ENST00000258607 H3BNG1 76 aa5.84□□□□□ -1.48
CKAP2-201ENST00000258607 LINC01561Q8N1V8 128 aa5.84□□□□□ -1.48
CKAP2-201ENST00000258607 DNAH9Q9NYC9 4486 aa5.84□□□□□ -1.48
CKAP2-201ENST00000258607 B9D2Q9BPU9 175 aa5.83□□□□□ -1.48
CKAP2-201ENST00000258607 APLNQ9ULZ1 77 aa5.83□□□□□ -1.48
CKAP2-201ENST00000258607 KRTAP11-1Q8IUC1 163 aa5.83□□□□□ -1.48
CKAP2-201ENST00000258607 KMT2AQ03164 3969 aa5.83□□□□□ -1.48
CKAP2-201ENST00000258607 LOC107984640A0A0U1RRK4 108 aa5.83□□□□□ -1.48
CKAP2-201ENST00000258607 JMJD7-PLA2G4BH0Y9G9 81 aa5.83□□□□□ -1.48
CKAP2-201ENST00000258607 MUC7Q8TAX7 377 aa5.83□□□□□ -1.48
CKAP2-201ENST00000258607 C2orf48Q96LS8 159 aa5.83□□□□□ -1.48
CKAP2-201ENST00000258607 SNURFQ9Y675 71 aa5.83□□□□□ -1.48
CKAP2-201ENST00000258607 KRTAP7-1Q8IUC3 87 aa5.82□□□□□ -1.48
CKAP2-201ENST00000258607 Q9BRP9 147 aa5.82□□□□□ -1.48
CKAP2-201ENST00000258607 NBDYA0A0U1RRE5 68 aa5.82□□□□□ -1.48
CKAP2-201ENST00000258607 ELOF1P60002 83 aaKnown RBP5.82□□□□□ -1.48
CKAP2-201ENST00000258607 NREPQ16612 68 aa5.81□□□□□ -1.48
CKAP2-201ENST00000258607 STARD9Q9P2P6 4700 aa5.81□□□□□ -1.48
CKAP2-201ENST00000258607 GHRHP01286 108 aa5.81□□□□□ -1.48
CKAP2-201ENST00000258607 Q6ZVQ6 151 aa5.81□□□□□ -1.48
CKAP2-201ENST00000258607 REG3GQ6UW15 175 aa5.8□□□□□ -1.48
CKAP2-201ENST00000258607 C20orf197Q8N268 126 aa5.8□□□□□ -1.48
CKAP2-201ENST00000258607 F8WEM9 126 aa5.8□□□□□ -1.48
CKAP2-201ENST00000258607 LINC00528Q8N1L1 170 aa5.8□□□□□ -1.48
CKAP2-201ENST00000258607 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.8□□□□□ -1.48
CKAP2-201ENST00000258607 Q8N377 158 aa5.8□□□□□ -1.48
CKAP2-201ENST00000258607 SMIM20Q8N5G0 67 aa5.79□□□□□ -1.48
CKAP2-201ENST00000258607 RPL37AP61513 92 aaKnown RBP5.79□□□□□ -1.48
CKAP2-201ENST00000258607 C1orf137Q5JT78 98 aa5.79□□□□□ -1.48
CKAP2-201ENST00000258607 Q6ZQT0 140 aa5.79□□□□□ -1.48
CKAP2-201ENST00000258607 PRR4Q16378 134 aa5.78□□□□□ -1.48
CKAP2-201ENST00000258607 ACYP1P07311 99 aa5.78□□□□□ -1.48
CKAP2-201ENST00000258607 WFDC13Q8IUB5 93 aa5.78□□□□□ -1.48
CKAP2-201ENST00000258607 A0A087WSZ3 146 aa5.78□□□□□ -1.48
CKAP2-201ENST00000258607 Q6JHZ5 121 aa5.78□□□□□ -1.48
CKAP2-201ENST00000258607 SPINK6Q6UWN8 80 aa5.78□□□□□ -1.48
CKAP2-201ENST00000258607 CYSTM1Q9H1C7 97 aa5.78□□□□□ -1.48
CKAP2-201ENST00000258607 LINC01547P58512 204 aaPredicted RBP5.77□□□□□ -1.49
CKAP2-201ENST00000258607 Q6ZRX8 168 aa5.77□□□□□ -1.49
CKAP2-201ENST00000258607 DMBT1Q9UGM3 2413 aaPredicted RBP5.77□□□□□ -1.49
CKAP2-201ENST00000258607 IGLV1-50A0A075B6I6 118 aa5.77□□□□□ -1.49
CKAP2-201ENST00000258607 EPM2AB3EWF7 344 aa5.76□□□□□ -1.49
CKAP2-201ENST00000258607 NUPR2A6NF83 97 aa5.76□□□□□ -1.49
CKAP2-201ENST00000258607 FAM240AA0A1B0GVK7 77 aa5.76□□□□□ -1.49
CKAP2-201ENST00000258607 TNP2Q05952 138 aa5.75□□□□□ -1.49
CKAP2-201ENST00000258607 IGLV5-52A0A0A0MRZ9 124 aa5.74□□□□□ -1.49
CKAP2-201ENST00000258607 FAM30AQ9NZY2 134 aa5.74□□□□□ -1.49
CKAP2-201ENST00000258607 RTL8CO15255 209 aa5.73□□□□□ -1.49
CKAP2-201ENST00000258607 LINC00476Q8WZB0 136 aa5.73□□□□□ -1.49
CKAP2-201ENST00000258607 KCNQ1DNQ9H478 68 aa5.73□□□□□ -1.49
CKAP2-201ENST00000258607 C16orf90A8MZG2 172 aa5.72□□□□□ -1.49
CKAP2-201ENST00000258607 H0Y9J4 135 aa5.72□□□□□ -1.49
CKAP2-201ENST00000258607 C1orf134Q5TEV5 83 aa5.71□□□□□ -1.5
CKAP2-201ENST00000258607 SMR3BP02814 79 aaPredicted RBP5.71□□□□□ -1.5
CKAP2-201ENST00000258607 A0A087WTM6 91 aa5.7□□□□□ -1.5
CKAP2-201ENST00000258607 A0A1W2PNM2 257 aa5.7□□□□□ -1.5
CKAP2-201ENST00000258607 OBSCN-AS1Q96MR7 158 aa5.7□□□□□ -1.5
CKAP2-201ENST00000258607 TRBV7-7A0A0K0K1E9 115 aa5.7□□□□□ -1.5
CKAP2-201ENST00000258607 DHRS4-AS1Q9P1J3 65 aa5.69□□□□□ -1.5
CKAP2-201ENST00000258607 KRTAP10-2P60368 255 aa5.69□□□□□ -1.5
CKAP2-201ENST00000258607 C9orf163Q8N9P6 203 aa5.68□□□□□ -1.5
CKAP2-201ENST00000258607 CIRBP-AS1Q8TBR5 109 aa5.68□□□□□ -1.5
CKAP2-201ENST00000258607 RETNLBQ9BQ08 111 aa5.68□□□□□ -1.5
CKAP2-201ENST00000258607 FRAS1Q86XX4 4008 aa5.68□□□□□ -1.5
CKAP2-201ENST00000258607 ATOX1O00244 68 aa5.67□□□□□ -1.5
CKAP2-201ENST00000258607 PRYO14603 147 aa5.67□□□□□ -1.5
CKAP2-201ENST00000258607 K7EQZ3 153 aa5.67□□□□□ -1.5
CKAP2-201ENST00000258607 NDUFS5O43920 106 aa5.67□□□□□ -1.5
CKAP2-201ENST00000258607 MOBPQ13875 183 aa5.67□□□□□ -1.5
CKAP2-201ENST00000258607 C14orf177Q52M58 125 aa5.67□□□□□ -1.5
CKAP2-201ENST00000258607 IGFL1Q6UW32 110 aa5.67□□□□□ -1.5
CKAP2-201ENST00000258607 SMIM29Q86T20 159 aa5.67□□□□□ -1.5
CKAP2-201ENST00000258607 DNAH3Q8TD57 4116 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 106.4 ms