RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 SEC61BP60468 96 aaKnown RBP8.59□□□□□ -1.04
PRPF38A-201ENST00000257181 IGFL1Q6UW32 110 aa8.57□□□□□ -1.04
PRPF38A-201ENST00000257181 TLN2Q9Y4G6 2542 aa8.56□□□□□ -1.04
PRPF38A-201ENST00000257181 Q5VSD8 79 aa8.56□□□□□ -1.04
PRPF38A-201ENST00000257181 Q6ZSA8 131 aa8.56□□□□□ -1.04
PRPF38A-201ENST00000257181 DEFB116Q30KQ4 102 aa8.55□□□□□ -1.04
PRPF38A-201ENST00000257181 FP248Q71RG6 208 aaPredicted RBP8.55□□□□□ -1.04
PRPF38A-201ENST00000257181 C8orf17Q9NRJ1 99 aa8.55□□□□□ -1.04
PRPF38A-201ENST00000257181 LINC00846Q9NV44 126 aa8.55□□□□□ -1.04
PRPF38A-201ENST00000257181 PCOTHQ58A44 107 aa8.54□□□□□ -1.04
PRPF38A-201ENST00000257181 SNURFQ9Y675 71 aa8.52□□□□□ -1.05
PRPF38A-201ENST00000257181 PRR15Q8IV56 129 aa8.51□□□□□ -1.05
PRPF38A-201ENST00000257181 SMIM29Q86T20 159 aa8.51□□□□□ -1.05
PRPF38A-201ENST00000257181 HELZ2Q9BYK8 2649 aaKnown RBP8.51□□□□□ -1.05
PRPF38A-201ENST00000257181 Q6ZR54 194 aa8.51□□□□□ -1.05
PRPF38A-201ENST00000257181 SMIM26A0A096LP01 95 aa8.5□□□□□ -1.05
PRPF38A-201ENST00000257181 ERC2-IT1O76042 136 aa8.5□□□□□ -1.05
PRPF38A-201ENST00000257181 A6NED7 52 aa8.49□□□□□ -1.05
PRPF38A-201ENST00000257181 HECTD1Q9ULT8 2610 aa8.48□□□□□ -1.05
PRPF38A-201ENST00000257181 FAM218AQ96MZ4 157 aa8.47□□□□□ -1.05
PRPF38A-201ENST00000257181 Q8N377 158 aa8.47□□□□□ -1.05
PRPF38A-201ENST00000257181 ACANP16112 2415 aa8.47□□□□□ -1.05
PRPF38A-201ENST00000257181 OBSCN-AS1Q96MR7 158 aa8.47□□□□□ -1.05
PRPF38A-201ENST00000257181 IGLV5-48A0A075B6I7 105 aa8.44□□□□□ -1.06
PRPF38A-201ENST00000257181 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.44□□□□□ -1.06
PRPF38A-201ENST00000257181 DSCR10P59022 87 aa8.44□□□□□ -1.06
PRPF38A-201ENST00000257181 A0A1B0GU69 56 aa8.43□□□□□ -1.06
PRPF38A-201ENST00000257181 POLQO75417 2590 aa8.42□□□□□ -1.06
PRPF38A-201ENST00000257181 C9orf92A6NGG3 77 aa8.41□□□□□ -1.06
PRPF38A-201ENST00000257181 SPRR1BP22528 89 aa8.4□□□□□ -1.06
PRPF38A-201ENST00000257181 PRR26Q8N8Z3 221 aa8.4□□□□□ -1.07
PRPF38A-201ENST00000257181 FLNBO75369 2602 aaKnown RBP8.4□□□□□ -1.07
PRPF38A-201ENST00000257181 A8MUN3 132 aa8.39□□□□□ -1.07
PRPF38A-201ENST00000257181 MPLKIPQ8TAP9 179 aa8.38□□□□□ -1.07
PRPF38A-201ENST00000257181 A0A087WVE0 104 aa8.36□□□□□ -1.07
PRPF38A-201ENST00000257181 RPS29P62273 56 aaKnown RBP8.36□□□□□ -1.07
PRPF38A-201ENST00000257181 SPRR1AP35321 89 aa8.36□□□□□ -1.07
PRPF38A-201ENST00000257181 FAM104AQ969W3 186 aa8.33□□□□□ -1.08
PRPF38A-201ENST00000257181 KRTAP10-1P60331 282 aa8.32□□□□□ -1.08
PRPF38A-201ENST00000257181 USP24Q9UPU5 2620 aa8.32□□□□□ -1.08
PRPF38A-201ENST00000257181 K7EQZ3 153 aa8.31□□□□□ -1.08
PRPF38A-201ENST00000257181 IGLV8-61A0A075B6I0 122 aa8.3□□□□□ -1.08
PRPF38A-201ENST00000257181 M0R2T5 61 aa8.3□□□□□ -1.08
PRPF38A-201ENST00000257181 C1orf195Q5TG92 126 aa8.29□□□□□ -1.08
PRPF38A-201ENST00000257181 HRES1P13985 223 aa8.29□□□□□ -1.08
PRPF38A-201ENST00000257181 LINC00483Q53H64 154 aa8.26□□□□□ -1.09
PRPF38A-201ENST00000257181 FLNAP21333 2647 aaKnown RBP8.26□□□□□ -1.09
PRPF38A-201ENST00000257181 PRO0461Q9UI25 63 aa8.25□□□□□ -1.09
PRPF38A-201ENST00000257181 ANAPC11Q9NYG5 84 aa8.25□□□□□ -1.09
PRPF38A-201ENST00000257181 KRTAP26-1Q6PEX3 210 aa8.24□□□□□ -1.09
PRPF38A-201ENST00000257181 Q8N1X5 172 aa8.24□□□□□ -1.09
PRPF38A-201ENST00000257181 KRTAP1-5Q9BYS1 174 aa8.23□□□□□ -1.09
PRPF38A-201ENST00000257181 KRTAP10-2P60368 255 aa8.23□□□□□ -1.09
PRPF38A-201ENST00000257181 ITPR3Q14573 2671 aa8.22□□□□□ -1.09
PRPF38A-201ENST00000257181 ZCCHC13Q8WW36 166 aaKnown RBP8.22□□□□□ -1.09
PRPF38A-201ENST00000257181 SVIPQ8NHG7 77 aa8.21□□□□□ -1.09
PRPF38A-201ENST00000257181 A0A1W2PNM2 257 aa8.21□□□□□ -1.1
PRPF38A-201ENST00000257181 SMCPP49901 116 aaPredicted RBP8.19□□□□□ -1.1
PRPF38A-201ENST00000257181 SPANXA2-OT1Q8N9U9 137 aa8.19□□□□□ -1.1
PRPF38A-201ENST00000257181 BAHCC1Q9P281 2608 aa8.18□□□□□ -1.1
PRPF38A-201ENST00000257181 CSAG1Q6PB30 78 aa8.17□□□□□ -1.1
PRPF38A-201ENST00000257181 CCDC179H3BU77 68 aa8.17□□□□□ -1.1
PRPF38A-201ENST00000257181 LINC01600Q96MT4 127 aa8.16□□□□□ -1.1
PRPF38A-201ENST00000257181 SETD2Q9BYW2 2564 aaPredicted RBP8.15□□□□□ -1.1
PRPF38A-201ENST00000257181 Q6ZRN7 208 aaPredicted RBP8.13□□□□□ -1.11
PRPF38A-201ENST00000257181 CYP4F30PQ9H0H9 118 aa8.13□□□□□ -1.11
PRPF38A-201ENST00000257181 WDR87Q6ZQQ6 2873 aa8.12□□□□□ -1.11
PRPF38A-201ENST00000257181 UQCR11O14957 56 aa8.12□□□□□ -1.11
PRPF38A-201ENST00000257181 ZNF292O60281 2723 aa8.12□□□□□ -1.11
PRPF38A-201ENST00000257181 ASB16-AS1Q495Z4 193 aa8.1□□□□□ -1.11
PRPF38A-201ENST00000257181 COA5Q86WW8 74 aa8.09□□□□□ -1.11
PRPF38A-201ENST00000257181 S4R3F8 94 aa8.07□□□□□ -1.12
PRPF38A-201ENST00000257181 EIF4EBP3O60516 100 aaPredicted RBP8.06□□□□□ -1.12
PRPF38A-201ENST00000257181 RPS28P62857 69 aaKnown RBP8.05□□□□□ -1.12
PRPF38A-201ENST00000257181 CFAP46Q8IYW2 2715 aa8.05□□□□□ -1.12
PRPF38A-201ENST00000257181 KMT2BQ9UMN6 2715 aaPredicted RBP8.04□□□□□ -1.12
PRPF38A-201ENST00000257181 Q5XG85 94 aa8.03□□□□□ -1.12
PRPF38A-201ENST00000257181 KLKP1Q107X0 134 aa8.02□□□□□ -1.13
PRPF38A-201ENST00000257181 UNC79Q9P2D8 2635 aa8.01□□□□□ -1.13
PRPF38A-201ENST00000257181 MGAM2Q2M2H8 2515 aa8□□□□□ -1.13
PRPF38A-201ENST00000257181 MAST4O15021 2626 aa7.98□□□□□ -1.13
PRPF38A-201ENST00000257181 PSPHP1O15172 72 aa7.97□□□□□ -1.13
PRPF38A-201ENST00000257181 LINC00472Q9H8W2 130 aa7.96□□□□□ -1.13
PRPF38A-201ENST00000257181 PMAIP1Q13794 54 aa7.96□□□□□ -1.14
PRPF38A-201ENST00000257181 CRIPTQ9P021 101 aa7.96□□□□□ -1.14
PRPF38A-201ENST00000257181 MMP24-AS1A0A0U1RRL7 71 aa7.95□□□□□ -1.14
PRPF38A-201ENST00000257181 SPINK7P58062 85 aa7.94□□□□□ -1.14
PRPF38A-201ENST00000257181 ATRQ13535 2644 aa7.94□□□□□ -1.14
PRPF38A-201ENST00000257181 A0A0G2JQZ4 141 aa7.93□□□□□ -1.14
PRPF38A-201ENST00000257181 CHD9Q3L8U1 2897 aa7.92□□□□□ -1.14
PRPF38A-201ENST00000257181 MIR22HGQ0VDD5 57 aa7.91□□□□□ -1.14
PRPF38A-201ENST00000257181 KRTAP4-16G5E9R7 235 aaPredicted RBP7.9□□□□□ -1.14
PRPF38A-201ENST00000257181 IGSF10Q6WRI0 2623 aa7.9□□□□□ -1.14
PRPF38A-201ENST00000257181 CAMK2N1Q7Z7J9 78 aa7.9□□□□□ -1.15
PRPF38A-201ENST00000257181 Q75L30 129 aa7.89□□□□□ -1.15
PRPF38A-201ENST00000257181 TRANK1O15050 2925 aa7.88□□□□□ -1.15
PRPF38A-201ENST00000257181 CDC42SE1Q9NRR8 79 aa7.85□□□□□ -1.15
PRPF38A-201ENST00000257181 DMAC1Q96GE9 116 aa7.84□□□□□ -1.15
PRPF38A-201ENST00000257181 Q5W150 140 aa7.83□□□□□ -1.16
PRPF38A-201ENST00000257181 CENPFP49454 3210 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms